Project measure / variable:   CSNA03   dist_f30_cont_in_d1

ID, description, units MPD:90328   dist_f30_cont_in_d1   distance traveled, first 30 min (pre-injection), on successive days, saline group, founders   [cm]  day 1  
Data set, strains CSNA03   inbred w/CC8   9 strains     sex: both     age: 8-14wks
Procedure open field test
Ontology mappings

  •   Or, add this measure to your collection.
       
  •     no folder
  •     put it in new folder  

  STRAIN COMPARISON PLOT
Dimensions Width:   px    Height:   px
Download Plot   
Visualization Options

CSNA03 - distance traveled, first 30 min (pre-injection), on successive days, saline group, founders day 1



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested9 strains9 strains
Mean of the strain means8930.0   cm 6304.0   cm
Median of the strain means10337.0   cm 7444.0   cm
SD of the strain means± 6670.0 ± 3667.0
Coefficient of variation (CV)0.747 0.5817
Min–max range of strain means1140.0   –   22167.0   cm 1349.0   –   11054.0   cm
Mean sample size per strain6.9   mice 6.8   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 203894213.0445 203894213.0445 7.3192 0.008
strain 8 2714696262.3012 339337032.7877 12.1811 < 0.0001
sex:strain 8 281855873.8367 35231984.2296 1.2647 0.2699
Residuals 105 2925049933.9533 27857618.4186


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 1140.0 1192.0   8 421.6 1.0463 -1.17
129S1/SvImJ m 1349.0 1899.0   8 671.3 1.4071 59.69, 5071.0 -1.35
A/J f 2788.0 2944.0   7 1113.0 1.0557 270.7, 9103.0 -0.92
A/J m 1578.0 806.3   8 285.1 0.5111 106.7, 2591.0 -1.29
C57BL/6J f 10404.0 11044.0   7 4174.0 1.0615 5036.0, 35378.0 0.22
C57BL/6J m 6768.0 2632.0   6 1075.0 0.3889 4622.0, 11715.0 0.13
CAST/EiJ f 13958.0 2099.0   7 793.3 0.1504 10498.0, 16833.0 0.75
CAST/EiJ m 10465.0 2768.0   7 1046.0 0.2646 6612.0, 14959.0 1.13
DBA/2J f 5142.0 489.5   3 282.6 0.0952 4705.0, 5671.0 -0.57
DBA/2J m 7444.0 2049.0   3 1183.0 0.2753 5085.0, 8786.0 0.31
NOD/ShiLtJ f 22167.0 21213.0   5 9487.0 0.957 7966.0, 59561.0 1.98
NOD/ShiLtJ m 11054.0 2833.0   5 1267.0 0.2563 7850.0, 14436.0 1.3
NZO/HlLtJ f 3174.0 843.2   10 266.7 0.2656 1874.0, 4536.0 -0.86
NZO/HlLtJ m 2462.0 1065.0   9 355.1 0.4327 1219.0, 4224.0 -1.05
PWK/PhJ f 11258.0 1520.0   8 537.3 0.135 9357.0, 14004.0 0.35
PWK/PhJ m 7817.0 832.6   8 294.4 0.1065 6502.0, 9037.0 0.41
WSB/EiJ f 10337.0 4295.0   7 1623.0 0.4155 6347.0, 18511.0 0.21
WSB/EiJ m 7796.0 1025.0   7 387.5 0.1315 6378.0, 9361.0 0.41


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 1139.665 1866.0659962406 4839.7291592554 -2560.3991592554
129S1/SvImJ m 1349.43625 1866.0659962406 5049.5004092554 -2350.6279092554
A/J f 2788.2428571429 1994.9084625832 6743.7778265759 -1167.2921122901
A/J m 1577.7125 1866.0659962406 5277.7766592554 -2122.3516592554
C57BL/6J f 10403.7142857143 1994.9084625832 14359.2492551473 6448.1793162813
C57BL/6J m 6768.0 2154.7474105102 11040.46607673 2495.53392327
CAST/EiJ f 13958.2857142857 1994.9084625832 17913.8206837187 10002.7507448527
CAST/EiJ m 10464.5714285714 1994.9084625832 14420.1063980044 6509.0364591384
DBA/2J f 5142.0 3047.2730114319 11184.1794704905 -900.1794704905
DBA/2J m 7444.0 3047.2730114319 13486.1794704905 1401.8205295095
NOD/ShiLtJ f 22166.8 2360.4075249246 26847.0520928012 17486.5479071988
NOD/ShiLtJ m 11054.4 2360.4075249246 15734.6520928012 6374.1479071987
NZO/HlLtJ f 3174.4 1669.0601672379 6483.8379924823 -135.0379924823
NZO/HlLtJ m 2461.5555555556 1759.3438934445 5950.0094993353 -1026.8983882242
PWK/PhJ f 11258.5 1866.0659962406 14958.5641592554 7558.4358407446
PWK/PhJ m 7816.625 1866.0659962406 11516.6891592554 4116.5608407446
WSB/EiJ f 10337.2857142857 1994.9084625832 14292.8206837187 6381.7507448527
WSB/EiJ m 7796.0 1994.9084625832 11751.534969433 3840.465030567


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 1244.550625 1319.5079200833 3860.8910828348 -1371.7898328348
A/J both 2182.9776785714 1365.8204563935 4891.1473407701 -525.1919836273
C57BL/6J both 8585.8571428571 1468.2128743124 11497.0520552263 5674.662230488
CAST/EiJ both 12211.4285714286 1410.613301739 15008.4141715352 9414.442971322
DBA/2J both 6293.0 2154.7474105102 10565.46607673 2020.53392327
NOD/ShiLtJ both 16610.6 1669.0601672379 19920.0379924823 13301.1620075177
NZO/HlLtJ both 2817.9777777778 1212.5440999465 5222.2287393018 413.7268162537
PWK/PhJ both 9537.5625 1319.5079200833 12153.9029578348 6921.2220421652
WSB/EiJ both 9066.6428571429 1410.613301739 11863.6284572495 6269.6572570363




  GWAS USING LINEAR MIXED MODELS