Project measure / variable:   CSNA03   dist_d12_d2_cocaine_do

ID, description, units MPD:90321   dist_d12_d2_cocaine_do   distance traveled, last 60 min (post-injection), Day 12 (saline) minus Day 2 (saline), cocaine sensitization, DO   [cm]  
cocaine study
Data set, strains CSNA03   DO population w/par   9 strains     sex: both     age: 8-21wks
Procedure open field test
Ontology mappings

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Plot Options Bins number: (min: 10, max: 40)


Distribution of Individual Animals with Boxplots.





  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested9 strains9 strains
Mean of the strain means970.5   cm 1746.0   cm
Median of the strain means801.7   cm 1148.0   cm
SD of the strain means± 1208.0 ± 1248.0
Coefficient of variation (CV)1.2443 0.7146
Min–max range of strain means-845.2   –   3473.0   cm 721.5   –   4021.0   cm
Mean sample size per strain26.7   mice 27.0   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 104486712.8768 104486712.8768 5.7143 0.0172
strain 8 110306684.9139 13788335.6142 0.7541 0.6436
sex:strain 8 49227401.1197 6153425.14 0.3365 0.9517
Residuals 465 8502576670.4126 18285111.1192


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 361.0 871.7   6 355.9 2.4146 -12.7, 2140.0 -0.5
129S1/SvImJ m 816.9 1665.0   6 679.7 2.0381 -485.9, 4089.0 -0.74
A/J f 584.1 1019.0   12 294.0 1.7439 -978.6, 2218.0 -0.32
A/J m 1024.0 1719.0   11 518.2 1.6782 -976.3, 5486.0 -0.58
C57BL/6J f 1964.0 1623.0   5 726.0 0.8266 -45.03, 3345.0 0.82
C57BL/6J m 1148.0 4182.0   6 1707.0 3.6415 -3333.0, 8355.0 -0.48
CAST/EiJ f 3473.0 10033.0   6 4096.0 2.8887 -9680.0, 17484.0 2.07
CAST/EiJ m 3660.0 3326.0   5 1487.0 0.9087 -1384.0, 7766.0 1.53
J:DO f 1045.0 3566.0   184 262.9 3.4136 -9878.0, 25170.0 0.06
J:DO m 2029.0 4523.0   188 329.9 2.2292 -21328.0, 33532.0 0.23
NOD/ShiLtJ f 232.9 6543.0   6 2671.0 28.101 -8628.0, 9414.0 -0.61
NOD/ShiLtJ m 4021.0 10648.0   6 4347.0 2.6483 -5675.0, 21155.0 1.82
NZO/HlLtJ f 1118.0 506.9   6 207.0 0.4535 509.8, 1811.0 0.12
NZO/HlLtJ m 721.5 421.3   7 159.2 0.5839 205.4, 1230.0 -0.82
PWK/PhJ f -845.2 6005.0   8 2123.0 -7.1046 -8479.0, 8661.0 -1.5
PWK/PhJ m 1263.0 7177.0   7 2713.0 5.6848 -10192.0, 8872.0 -0.39
WSB/EiJ f 801.7 6561.0   7 2480.0 8.1841 -4129.0, 14892.0 -0.14
WSB/EiJ m 1031.0 2640.0   7 997.7 2.5608 -2613.0, 4230.0 -0.57


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 361.0076666666 1745.7143293967 3791.4737501939 -3069.4584168606
129S1/SvImJ m 816.9333333334 1745.7143293967 4247.3994168606 -2613.5327501939
A/J f 584.0940000001 1234.4064403309 3009.7998302926 -1841.6118302924
A/J m 1024.1463636364 1289.2954777766 3557.7134734888 -1509.420746216
C57BL/6J f 1963.874 1912.3342343412 5721.7613134085 -1794.0133134085
C57BL/6J m 1148.3333333333 1745.7143293968 4578.7994168605 -2282.1327501939
CAST/EiJ f 3473.3333333334 1745.7143293968 6903.7994168606 42.8672498061
CAST/EiJ m 3660.2 1912.3342343412 7418.0873134085 -97.6873134085
J:DO f 1044.7165 315.2389631827 1664.1858789208 425.2471210792
J:DO m 2029.0673510638 311.8673265305 2641.9111985408 1416.2235035869
NOD/ShiLtJ f 232.85 1745.7143293968 3663.3160835272 -3197.6160835272
NOD/ShiLtJ m 4020.8333333333 1745.7143293967 7451.2994168605 590.3672498061
NZO/HlLtJ f 1117.75 1745.7143293968 4548.2160835273 -2312.7160835272
NZO/HlLtJ m 721.4714285714 1616.2174146165 3897.4658802889 -2454.5230231461
PWK/PhJ f -845.25 1511.8329570081 2125.6207751555 -3816.1207751555
PWK/PhJ m 1262.5714285714 1616.2174146165 4438.565880289 -1913.4230231461
WSB/EiJ f 801.7142857143 1616.2174146165 3977.7087374318 -2374.2801660032
WSB/EiJ m 1030.8571428571 1616.2174146165 4206.8515945747 -2145.1373088604


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 588.9705 1234.406440331 3014.6763302925 -1836.7353302925
A/J both 804.1201818182 892.4743818376 2557.9025995686 -949.6622359321
C57BL/6J both 1556.1036666667 1294.6563968573 4100.2054045354 -987.9980712021
CAST/EiJ both 3566.7666666667 1294.6563968573 6110.8684045354 1022.6649287979
J:DO both 1536.8919255319 221.718759505 1972.5867421211 1101.1971089427
NOD/ShiLtJ both 2126.8416666667 1234.406440331 4552.5474969592 -298.8641636259
NZO/HlLtJ both 919.6107142857 1189.5038094906 3257.0793401485 -1417.8579115771
PWK/PhJ both 208.6607142857 1106.5484197727 2383.1154689319 -1965.7940403605
WSB/EiJ both 916.2857142857 1142.8382937471 3162.052928106 -1329.4814995346




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA