Project measure / variable:   CSNA03   dist_d5_d3_cocaine_do

ID, description, units MPD:90315   dist_d5_d3_cocaine_do   distance traveled, last 60 min (post-injection), Day 5 (cocaine) minus Day 3 (cocaine), cocaine sensitization, DO   [cm]  
cocaine study
Data set, strains CSNA03   DO population w/par   9 strains     sex: both     age: 8-21wks
Procedure open field test
Ontology mappings

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Plot Options Bins number: (min: 10, max: 40)


Distribution of Individual Animals with Boxplots.





  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested9 strains9 strains
Mean of the strain means1887.0   cm 2156.0   cm
Median of the strain means1587.0   cm 2097.0   cm
SD of the strain means± 2056.0 ± 4484.0
Coefficient of variation (CV)1.0898 2.0802
Min–max range of strain means-1187.0   –   5219.0   cm -5014.0   –   11863.0   cm
Mean sample size per strain26.8   mice 27.7   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 265688139.581 265688139.581 7.7254 0.0057
strain 8 844757952.2278 105594744.0285 3.0704 0.0022
sex:strain 8 734483454.2072 91810431.7759 2.6696 0.0071
Residuals 472 16232694398.7615 34391301.6923


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 984.8 2284.0   6 932.5 2.3192 -37.988, 5643.0 -0.44
129S1/SvImJ m -137.3 1202.0   6 490.5 -8.7491 -1102.0, 1863.0 -0.51
A/J f -1187.0 1771.0   12 511.3 -1.492 -4962.0, 797.5 -1.49
A/J m 370.3 2004.0   12 578.5 5.4113 -2414.0, 4865.0 -0.4
C57BL/6J f 977.1 8284.0   5 3705.0 8.4789 -12896.0, 8347.0 -0.44
C57BL/6J m 2554.0 5471.0   7 2068.0 2.142 -3846.0, 11593.0 0.09
CAST/EiJ f -76.83 5176.0   6 2113.0 -67.3681 -7734.0, 7419.0 -0.95
CAST/EiJ m 11863.0 8928.0   5 3993.0 0.7526 3333.0, 24960.0 2.16
J:DO f 2379.0 5161.0   184 380.5 2.1694 -13421.0, 29866.0 0.24
J:DO m 4384.0 6267.0   190 454.7 1.4295 -17597.0, 27115.0 0.5
NOD/ShiLtJ f 4528.0 5399.0   6 2204.0 1.1923 -1353.0, 14414.0 1.28
NOD/ShiLtJ m 2097.0 6276.0   6 2562.0 2.9922 -5214.0, 11883.0 -0.01
NZO/HlLtJ f 2569.0 2932.0   6 1197.0 1.1414 -191.4, 7502.0 0.33
NZO/HlLtJ m 885.0 2976.0   7 1125.0 3.3622 -4290.0, 5502.0 -0.28
PWK/PhJ f 5219.0 9426.0   9 3142.0 1.8062 -3431.0, 24918.0 1.62
PWK/PhJ m 2400.0 7183.0   9 2394.0 2.9935 -11545.0, 11885.0 0.05
WSB/EiJ f 1587.0 13243.0   7 5005.0 8.3445 -19470.0, 22225.0 -0.15
WSB/EiJ m -5014.0 7083.0   7 2677.0 -1.4126 -15003.0, 6913.0 -1.6


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 984.8361666667 2394.1352541955 5689.3183489757 -3719.6460156423
129S1/SvImJ m -137.3333333334 2394.1352541955 4567.1488489755 -4841.8155156424
A/J f -1187.1750000002 1692.9092733195 2139.3962530819 -4513.7462530822
A/J m 370.3431666666 1692.9092733194 3696.9144197485 -2956.2280864154
C57BL/6J f 977.06 2622.6437688825 6130.5620252635 -4176.4420252636
C57BL/6J m 2553.9571428571 2216.5385399083 6909.4613062606 -1801.5470205464
CAST/EiJ f -76.8333333333 2394.1352541955 4627.6488489756 -4781.3155156423
CAST/EiJ m 11863.4000000002 2622.6437688825 17016.9020252638 6709.8979747366
J:DO f 2379.2463152174 432.3300224686 3228.7759664835 1529.7166639513
J:DO m 4383.8825210526 425.4489993079 5219.8909433912 3547.8740987141
NOD/ShiLtJ f 4528.5 2394.1352541955 9232.982182309 -175.982182309
NOD/ShiLtJ m 2097.2833333333 2394.1352541955 6801.7655156423 -2607.1988489757
NZO/HlLtJ f 2568.7666666668 2394.1352541955 7273.2488489758 -2135.7155156422
NZO/HlLtJ m 884.9999999999 2216.5385399083 5240.5041634034 -3470.5041634036
PWK/PhJ f 5218.6666666667 1954.8032493292 9059.8602835574 1377.473049776
PWK/PhJ m 2399.5333333333 1954.8032493292 6240.726950224 -1441.6602835574
WSB/EiJ f 1587.0 2216.5385399083 5942.5041634035 -2768.5041634035
WSB/EiJ m -5014.2571428572 2216.5385399083 -658.7529794537 -9369.7613062607


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 423.7514166667 1692.9092733194 3750.3226697486 -2902.8198364153
A/J both -408.4159166668 1197.0676270978 1943.8251744877 -2760.6570078213
C57BL/6J both 1765.5085714285 1716.9233702584 5139.2675892683 -1608.2504464113
CAST/EiJ both 5893.2833333334 1775.5382250067 9382.2206976343 2404.3459690326
J:DO both 3381.564418135 303.2804392554 3977.5112929907 2785.6175432793
NOD/ShiLtJ both 3312.8916666667 1692.9092733194 6639.4629197486 -13.6795864153
NZO/HlLtJ both 1726.8833333334 1631.3281946225 4932.4476019563 -1478.6809352896
PWK/PhJ both 3809.1 1382.2546334862 6525.2340543539 1092.9659456461
WSB/EiJ both -1713.6285714286 1567.3294323305 1366.1779580003 -4793.4351008574




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA