Project measure / variable:   CSNA03   jump_counts_light_LD_do

ID, description, units MPD:90243   jump_counts_light_LD_do   jump counts in light, 20 min test (LD box), DO   [n]  
Data set, strains CSNA03   DO population w/par   9 strains     sex: both     age: 4-25wks
Procedure light-dark box
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Plot Options Bins number: (min: 10, max: 40)


Distribution of Individual Animals with Boxplots.





  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested9 strains9 strains
Mean of the strain means563.8   n 461.6   n
Median of the strain means679.2   n 473.8   n
SD of the strain means± 387.5 ± 334.9
Coefficient of variation (CV)0.6874 0.7254
Min–max range of strain means49.837   –   1051.0   n 43.551   –   958.3   n
Mean sample size per strain210.4   mice 199.0   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 32713176.8069 32713176.8069 414.5973 < 0.0001
strain 8 102249246.4349 12781155.8044 161.9847 < 0.0001
sex:strain 8 3354614.8299 419326.8537 5.3144 < 0.0001
Residuals 3667 289339123.5604 78903.497


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 49.837 122.0   49 17.433 2.4487 -1.33
129S1/SvImJ m 43.551 72.32   49 10.331 1.6606 -1.25
A/J f 115.2 227.2   60 29.334 1.9721 -1.16
A/J m 78.7 176.9   61 22.645 2.2472 -1.14
C57BL/6J f 725.7 219.5   60 28.339 0.3025 135.0, 1202.0 0.42
C57BL/6J m 595.4 182.0   59 23.699 0.3057 246.0, 1234.0 0.4
CAST/EiJ f 1013.0 286.9   33 49.95 0.2832 189.0, 1515.0 1.16
CAST/EiJ m 805.5 278.6   30 50.87 0.3459 2.0, 1188.0 1.03
J:DO f 679.2 324.2   1496 8.3822 0.4773 0.3
J:DO m 465.4 259.5   1403 6.9269 0.5575 0.01
NOD/ShiLtJ f 1051.0 449.2   47 65.52 0.4274 22.0, 2701.0 1.26
NOD/ShiLtJ m 958.3 256.4   44 38.659 0.2676 506.0, 1401.0 1.48
NZO/HlLtJ f 89.72 129.9   47 18.952 1.4481 1.0, 900.0 -1.22
NZO/HlLtJ m 71.33 46.802   46 6.9005 0.6562 1.0, 221.0 -1.17
PWK/PhJ f 612.8 262.9   47 38.341 0.4289 2.0, 1537.0 0.13
PWK/PhJ m 473.8 165.1   48 23.835 0.3486 0.04
WSB/EiJ f 737.8 198.7   55 26.798 0.2694 68.0, 1176.0 0.45
WSB/EiJ m 662.4 232.5   51 32.55 0.3509 0.6


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 49.8367346938 40.1282375556 128.5126034209 -28.8391340334
129S1/SvImJ m 43.5510204081 40.1282375556 122.2268891352 -35.1248483191
A/J f 115.2166666666 36.2637323453 186.31574351 44.1175898233
A/J m 78.7049180328 35.9652603368 149.2188073376 8.1910287279
C57BL/6J f 725.6666666666 36.2637323453 796.7657435099 654.5675898232
C57BL/6J m 595.3898305084 36.5697608286 667.0889101988 523.690750818
CAST/EiJ f 1013.2424242424 48.8980067192 1109.1123999005 917.3724485843
CAST/EiJ m 805.5333333333 51.284662105 906.0826120774 704.9840545893
J:DO f 679.189171123 7.2624361814 693.4279842495 664.9503579965
J:DO m 465.3756236636 7.4992751855 480.0787859749 450.6724613523
NOD/ShiLtJ f 1050.9574468085 40.9731352091 1131.2898312693 970.6250623477
NOD/ShiLtJ m 958.3409090909 42.3469160133 1041.366743471 875.3150747108
NZO/HlLtJ f 89.7234042553 40.9731352091 170.0557887161 9.3910197945
NZO/HlLtJ m 71.3260869565 41.4161008958 152.5269548677 -9.8747809547
PWK/PhJ f 612.7872340425 40.9731352091 693.1196185033 532.4548495817
PWK/PhJ m 473.75 40.544085321 553.2411844796 394.2588155204
WSB/EiJ f 737.7636363636 37.8762331373 812.0242001886 663.5030725386
WSB/EiJ m 662.4117647059 39.3335402994 739.5295411564 585.2939882553


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 46.6938775509 28.3749488926 102.3261178436 -8.9383627418
A/J both 96.9607923497 25.5370232932 147.0289641579 46.8926205415
C57BL/6J both 660.5282485875 25.7507557689 711.015466664 610.041030511
CAST/EiJ both 909.3878787879 35.4299718753 978.8522755833 839.9234819924
J:DO both 572.2823973933 5.2197247915 582.5162478564 562.0485469302
NOD/ShiLtJ both 1004.6491779497 29.4620904923 1062.4128801503 946.8854757491
NZO/HlLtJ both 80.5247456059 29.1294147825 137.6362001109 23.4132911009
PWK/PhJ both 543.2686170213 28.821088908 599.7755643887 486.7616696539
WSB/EiJ both 700.0877005347 27.3026392001 753.6175585214 646.5578425481




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA