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Project measure / variable:   CSNA03   jump_time_light_LD_do

ID, description, units MPD:90183   jump_time_light_LD_do   jump time in light, 20 min test (LD box), DO   [s]  
Data set, strains CSNA03   DO population w/par   9 strains     sex: both     age: 4-25wks
Procedure light-dark box
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Plot Options Bins number: (min: 10, max: 40)


Distribution of Individual Animals with Boxplots.





  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested9 strains9 strains
Mean of the strain means124.8   s 101.6   s
Median of the strain means144.9   s 113.9   s
SD of the strain means± 84.92 ± 74.58
Coefficient of variation (CV)0.6803 0.734
Min–max range of strain means8.641   –   246.3   s 5.8908   –   216.9   s
Mean sample size per strain210.4   mice 199.0   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 1960367.3693 1960367.3693 409.1697 < 0.0001
strain 8 5195064.9909 649383.1239 135.5398 < 0.0001
sex:strain 8 216928.711 27116.0889 5.6597 < 0.0001
Residuals 3667 17568914.2618 4791.0865


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 8.641 21.072   49 3.0103 2.4386 -1.37
129S1/SvImJ m 5.8908 10.291   49 1.4702 1.747 -1.28
A/J f 25.122 51.74   60 6.6802 2.0598 -1.17
A/J m 15.028 35.244   61 4.5125 2.3452 -1.16
C57BL/6J f 144.9 50.78   60 6.5556 0.3505 18.28, 244.7 0.24
C57BL/6J m 113.9 39.601   59 5.1556 0.3475 30.36, 223.2 0.16
CAST/EiJ f 193.2 53.67   33 9.3429 0.2779 42.08, 268.1 0.81
CAST/EiJ m 150.7 51.34   30 9.3733 0.3406 0.12, 234.5 0.66
J:DO f 156.5 82.69   1496 2.138 0.5284 0.37
J:DO m 103.6 61.27   1403 1.6358 0.5915 0.03
NOD/ShiLtJ f 246.3 98.17   47 14.32 0.3985 2.36, 470.0 1.43
NOD/ShiLtJ m 216.9 74.32   44 11.204 0.3427 92.48, 361.2 1.55
NZO/HlLtJ f 24.855 29.692   47 4.3311 1.1946 0.08, 195.3 -1.18
NZO/HlLtJ m 19.23 14.151   46 2.0865 0.7359 0.24, 66.64 -1.1
PWK/PhJ f 143.8 64.13   47 9.3539 0.446 0.08, 301.6 0.22
PWK/PhJ m 117.2 45.906   48 6.6259 0.3918 0.21
WSB/EiJ f 180.2 55.35   55 7.4634 0.3072 13.0, 344.7 0.65
WSB/EiJ m 172.0 67.44   51 9.4436 0.3921 0.94


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 8.6410204081 9.8882392709 28.0280122675 -10.7459714512
129S1/SvImJ m 5.8908163265 9.8882392709 25.2778081859 -13.4961755328
A/J f 25.1218333333 8.9359634046 42.641782541 7.6018841256
A/J m 15.0280327869 8.8624151299 32.4037824296 -2.3477168558
C57BL/6J f 144.866 8.9359634046 162.3859492077 127.3460507923
C57BL/6J m 113.9447457627 9.0113737154 131.6125452642 96.2769462612
CAST/EiJ f 193.1503030303 12.0492505967 216.7741977227 169.5264083379
CAST/EiJ m 150.7366666667 12.6373606396 175.5136164482 125.9597168851
J:DO f 156.4957352941 1.789580381 160.0044064869 152.9870641013
J:DO m 103.5982466144 1.847941298 107.2213408699 99.9751523588
NOD/ShiLtJ f 246.3259574468 10.0964355603 266.1211412659 226.5307736277
NOD/ShiLtJ m 216.8654545455 10.4349571133 237.3243474854 196.4065616055
NZO/HlLtJ f 24.8553191489 10.0964355603 44.6505029681 5.0601353298
NZO/HlLtJ m 19.2297826087 10.2055893872 39.2389746346 -0.7794094172
PWK/PhJ f 143.7944680851 10.0964355603 163.5896519042 123.999284266
PWK/PhJ m 117.16875 9.9907108085 136.7566486954 97.5808513046
WSB/EiJ f 180.1534545455 9.333309379 198.4524446887 161.8544644022
WSB/EiJ m 171.9831372549 9.692413162 190.9861902678 152.980084242


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 7.2659183673 6.9920410425 20.9745917779 -6.4427550432
A/J both 20.0749330601 6.2927308043 32.4125310423 7.7373350779
C57BL/6J both 129.4053728813 6.3453979033 141.8462305635 116.9645151992
CAST/EiJ both 171.9434848485 8.7305114953 189.0606227584 154.8263469385
J:DO both 130.0469909543 1.2862236373 132.5687753187 127.5252065898
NOD/ShiLtJ both 231.5957059961 7.2599301129 245.8296056968 217.3618062954
NZO/HlLtJ both 22.0425508788 7.1779534995 36.1157263197 7.9693754379
PWK/PhJ both 130.4816090426 7.1019770748 144.4058242604 116.5573938247
WSB/EiJ both 176.0682959002 6.727806791 189.2589086994 162.877683101




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA