Project measure / variable:   CSNA03   center_dist_OFT_do

ID, description, units MPD:90129   center_dist_OFT_do   distance traveled in center, 60 min test (OFT), DO   [cm]  
Data set, strains CSNA03   DO population w/par   9 strains     sex: both     age: 4-25wks
Procedure open field test
Ontology mappings

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Plot Options Bins number: (min: 10, max: 40)


Distribution of Individual Animals with Boxplots.





  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested9 strains9 strains
Mean of the strain means5542.0   cm 4793.0   cm
Median of the strain means6019.0   cm 5751.0   cm
SD of the strain means± 4297.0 ± 3546.0
Coefficient of variation (CV)0.7753 0.7398
Min–max range of strain means492.1   –   12720.0   cm 468.8   –   11380.0   cm
Mean sample size per strain208.1   mice 196.8   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 549796921.5731 549796921.5731 50.0465 < 0.0001
strain 8 11468583096.5114 1433572887.0639 130.4943 < 0.0001
sex:strain 8 308944073.4062 38618009.1758 3.5153 0.0005
Residuals 3626 39834203836.5462 10985715.3438


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 492.1 1430.0   48 206.3 2.9048 6.4758, 9474.0 -1.18
129S1/SvImJ m 728.2 1577.0   49 225.2 2.1652 7.7251, 8353.0 -1.15
A/J f 1113.0 2444.0   59 318.1 2.1949 6.35, 12326.0 -1.03
A/J m 1375.0 3646.0   61 466.8 2.6504 13.189, 25297.0 -0.96
C57BL/6J f 6019.0 1465.0   61 187.6 0.2434 3561.0, 9323.0 0.11
C57BL/6J m 6001.0 1862.0   59 242.4 0.3103 3075.0, 15361.0 0.34
CAST/EiJ f 10405.0 12318.0   33 2144.0 1.1839 999.9, 64143.0 1.13
CAST/EiJ m 6170.0 3080.0   30 562.4 0.4992 3028.0, 20432.0 0.39
J:DO f 4930.0 3550.0   1475 92.44 0.7202 6.35, 52884.0 -0.14
J:DO m 4112.0 2404.0   1383 64.65 0.5848 20.72, 19091.0 -0.19
NOD/ShiLtJ f 12720.0 6516.0   47 950.4 0.5123 6928.0, 46041.0 1.67
NOD/ShiLtJ m 11380.0 4665.0   44 703.3 0.41 5411.0, 29779.0 1.86
NZO/HlLtJ f 663.8 793.6   47 115.8 1.1954 16.064, 4361.0 -1.14
NZO/HlLtJ m 468.8 206.0   46 30.369 0.4393 120.8, 1004.0 -1.22
PWK/PhJ f 6675.0 2163.0   48 312.2 0.3241 3316.0, 15924.0 0.26
PWK/PhJ m 5751.0 2484.0   47 362.3 0.4319 15.345, 15060.0 0.27
WSB/EiJ f 6863.0 4077.0   55 549.7 0.594 2856.0, 31439.0 0.31
WSB/EiJ m 7149.0 6455.0   52 895.1 0.9029 3491.0, 41273.0 0.66


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 492.1409333339 478.4026229673 1430.1059369203 -445.8240702524
129S1/SvImJ m 728.2202469393 473.4957996879 1656.5648423298 -200.1243484512
A/J f 1113.2628135593 431.5073176075 1959.2840167811 267.2416103375
A/J m 1375.4582295082 424.3744739735 2207.4946479827 543.4218110337
C57BL/6J f 6018.5245901641 424.3744739736 6850.5610086386 5186.4881716895
C57BL/6J m 6000.9322033899 431.5073176075 6846.9534066116 5154.9110001682
CAST/EiJ f 10404.6030303038 576.9752724018 11535.8313878969 9273.3746727106
CAST/EiJ m 6170.1000000005 605.1367708703 7356.542310745 4983.657689256
J:DO f 4929.5283749153 86.3014635215 5098.7326155597 4760.324134271
J:DO m 4111.7301865511 89.1257260419 4286.471728368 3936.9886447342
NOD/ShiLtJ f 12719.8085106385 483.4652255703 13667.6993462347 11771.9176750422
NOD/ShiLtJ m 11379.5454545457 499.6752432553 12359.2179497026 10399.8729593888
NZO/HlLtJ f 663.837531915 483.4652255703 1611.7283675112 -284.0533036813
NZO/HlLtJ m 468.8086956523 488.6920285597 1426.9472975637 -489.3299062591
PWK/PhJ f 6674.8541666667 478.4026229674 7612.8191702532 5736.8891630802
PWK/PhJ m 5751.2201063831 483.4652255703 6699.1109419793 4803.3292707868
WSB/EiJ f 6862.8181818183 446.9231242371 7739.0638997613 5986.5724638752
WSB/EiJ m 7148.9230769232 459.6343727477 8050.0907030717 6247.7554507747


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 610.1805901366 336.5513861151 1270.0294432355 -49.6682629622
A/J both 1244.3605215338 302.6104175789 1837.6640859021 651.0569571654
C57BL/6J both 6009.728396777 302.6104175789 6603.0319611453 5416.4248324086
CAST/EiJ both 8287.3515151521 418.0583022804 9107.0043309448 7467.6986993594
J:DO both 4520.6292807332 62.0309149708 4642.2482363781 4399.0103250884
NOD/ShiLtJ both 12049.6769825921 347.639890209 12731.266161272 11368.0878039121
NZO/HlLtJ both 566.3231137836 343.7144611133 1240.2160237997 -107.5697962325
PWK/PhJ both 6213.0371365249 340.076349515 6879.7970978604 5546.2771751894
WSB/EiJ both 7005.8706293707 320.5479822074 7634.3429136904 6377.3983450511




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA