Project measure / variable:   CSNA03   pct_time_perimeter_corner_OFT_do

ID, description, units MPD:90120   pct_time_perimeter_corner_OFT_do   percentage of total time spent in perimeter and corners, 60 min test (OFT), DO   [%]  
Data set, strains CSNA03   DO population w/par   9 strains     sex: both     age: 4-25wks
Procedure open field test
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Plot Options Bins number: (min: 10, max: 40)


Distribution of Individual Animals with Boxplots.





  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested9 strains9 strains
Mean of the strain means57.86   % 56.59   %
Median of the strain means63.27   % 57.55   %
SD of the strain means± 14.216 ± 14.154
Coefficient of variation (CV)0.2457 0.2501
Min–max range of strain means25.231   –   70.98   % 25.102   –   69.9   %
Mean sample size per strain208.0   mice 196.8   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 311.9356 311.9356 1.0056 0.316
strain 8 204769.2936 25596.1617 82.5149 < 0.0001
sex:strain 8 4296.8585 537.1073 1.7315 0.0861
Residuals 3625 1124476.5179 310.2004


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 25.231 25.001   48 3.6086 0.9909 -2.29
129S1/SvImJ m 25.102 28.491   49 4.0701 1.135 3.197, 97.28 -2.22
A/J f 64.33 39.101   59 5.0905 0.6078 0.46
A/J m 55.29 40.318   61 5.1621 0.7292 0.35357, 99.85 -0.09
C57BL/6J f 59.11 6.5128   61 0.83388 0.1102 43.211, 75.05 0.09
C57BL/6J m 57.55 7.6841   59 1.0004 0.1335 31.463, 75.39 0.07
CAST/EiJ f 63.27 11.851   33 2.0629 0.1873 17.172, 82.18 0.38
CAST/EiJ m 66.63 7.0303   30 1.2836 0.1055 45.019, 77.91 0.71
J:DO f 65.33 15.433   1474 0.40197 0.2362 0.31337, 99.93 0.53
J:DO m 66.79 15.26   1383 0.41035 0.2285 2.35, 99.61 0.72
NOD/ShiLtJ f 48.249 7.046   47 1.0278 0.146 31.945, 65.08 -0.68
NOD/ShiLtJ m 49.142 7.6857   44 1.1587 0.1564 35.26, 68.63 -0.53
NZO/HlLtJ f 54.26 42.004   47 6.1269 0.7741 3.5571, 99.82 -0.25
NZO/HlLtJ m 50.66 43.703   46 6.4436 0.8626 3.4296, 95.54 -0.42
PWK/PhJ f 69.95 6.383   48 0.92131 0.0913 49.267, 82.09 0.85
PWK/PhJ m 69.9 12.148   47 1.772 0.1738 0.94
WSB/EiJ f 70.98 6.3885   55 0.86143 0.09 43.912, 81.29 0.92
WSB/EiJ m 68.25 7.0383   52 0.97604 0.1031 44.658, 80.07 0.82


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 25.231125 2.5421464796 30.2153047201 20.2469452799
129S1/SvImJ m 25.1020918367 2.5160724931 30.0351504135 20.16903326
A/J f 64.3328542373 2.2929531648 68.8284609047 59.8372475699
A/J m 55.2908095082 2.2550505019 59.7121035091 50.8695155073
C57BL/6J f 59.1140655738 2.2550505019 63.5353595746 54.6927715729
C57BL/6J m 57.5466949153 2.2929531648 62.0423015827 53.0510882479
CAST/EiJ f 63.2698181818 3.0659440127 69.280965098 57.2586712657
CAST/EiJ m 66.6293 3.2155892085 72.9338440733 60.3247559267
J:DO f 65.3342543894 0.4587461665 66.2336806649 64.434828114
J:DO m 66.7905418655 0.4735982618 67.7190874356 65.8619962954
NOD/ShiLtJ f 48.2488510638 2.5690482497 53.2857748953 43.2119272323
NOD/ShiLtJ m 49.1418181818 2.6551854015 54.3476241171 43.9360122466
NZO/HlLtJ f 54.2649553191 2.5690482497 59.3018791507 49.2280314876
NZO/HlLtJ m 50.6612217391 2.5968225514 55.7526003838 45.5698430944
PWK/PhJ f 69.9462083333 2.5421464796 74.9303880535 64.9620286132
PWK/PhJ m 69.8980851064 2.5690482497 74.9350089379 64.8611612749
WSB/EiJ f 70.9844 2.3748700203 75.6406143796 66.3281856204
WSB/EiJ m 68.2481730769 2.4424153348 73.0368180578 63.459528096


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 25.1666084184 1.7883742278 28.6729282271 21.6602886096
A/J both 59.8118318727 1.6080179556 62.9645418162 56.6591219293
C57BL/6J both 58.3303802445 1.6080179556 61.483090188 55.1776703011
CAST/EiJ both 64.9495590909 2.2214874885 69.3050488228 60.594069359
J:DO both 66.0623981275 0.329675355 66.7087657668 65.4160304881
NOD/ShiLtJ both 48.6953346228 1.847296567 52.317178667 45.0734905787
NZO/HlLtJ both 52.4630885291 1.8264375347 56.0440359662 48.8821410921
PWK/PhJ both 69.9221467199 1.8071052565 73.4651909324 66.3791025074
WSB/EiJ both 69.6162865385 1.7033349848 72.955876824 66.2766962529




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA