Project measure / variable:   CSNA03   pct_time_perimeter_corner_OFT_in

ID, description, units MPD:90118   pct_time_perimeter_corner_OFT_in   percentage of total time spent in perimeter and corners, 60 min test (OFT), founders   [%]  
Data set, strains CSNA03   inbred w/CC8   10 strains     sex: both     age: 4-14wks
Procedure open field test
Ontology mappings

  •   Or, add this measure to your collection.
       
  •     no folder
  •     put it in new folder  

  STRAIN COMPARISON PLOT
Dimensions Width:   px    Height:   px
Download Plot   
Visualization Options

CSNA03 - percentage of total time spent in perimeter and corners, 60 min test (OFT), founders



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested10 strains10 strains
Mean of the strain means58.92   % 55.91   %
Median of the strain means63.8   % 56.82   %
SD of the strain means± 13.831 ± 12.95
Coefficient of variation (CV)0.2347 0.2316
Min–max range of strain means25.231   –   70.98   % 25.102   –   69.9   %
Mean sample size per strain43.4   mice 42.6   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 1649.3382 1649.3382 2.947 0.0864
strain 9 147301.9382 16366.882 29.2437 < 0.0001
sex:strain 9 3099.3615 344.3735 0.6153 0.7847
Residuals 840 470124.331 559.6718


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 25.231 25.001   48 3.6086 0.9909 -2.44
129S1/SvImJ m 25.102 28.491   49 4.0701 1.135 3.197, 97.28 -2.38
A/J f 64.33 39.101   59 5.0905 0.6078 0.39
A/J m 55.29 40.318   61 5.1621 0.7292 0.35357, 99.85 -0.05
C57BL/6J f 59.11 6.5128   61 0.83388 0.1102 43.211, 75.05 0.01
C57BL/6J m 57.55 7.6841   59 1.0004 0.1335 31.463, 75.39 0.13
C57BL/6NJ f 64.95 21.625   13 5.9976 0.333 4.6687, 88.44 0.44
C57BL/6NJ m 56.09 12.902   13 3.5783 0.23 26.601, 70.74 0.01
CAST/EiJ f 63.27 11.851   33 2.0629 0.1873 17.172, 82.18 0.31
CAST/EiJ m 66.63 7.0303   30 1.2836 0.1055 45.019, 77.91 0.83
DBA/2J f 68.89 9.2584   23 1.9305 0.1344 41.664, 84.64 0.72
DBA/2J m 60.47 19.174   25 3.8347 0.3171 4.5977, 87.47 0.35
NOD/ShiLtJ f 48.249 7.046   47 1.0278 0.146 31.945, 65.08 -0.77
NOD/ShiLtJ m 49.142 7.6857   44 1.1587 0.1564 35.26, 68.63 -0.52
NZO/HlLtJ f 54.26 42.004   47 6.1269 0.7741 3.5571, 99.82 -0.34
NZO/HlLtJ m 50.66 43.703   46 6.4436 0.8626 3.4296, 95.54 -0.41
PWK/PhJ f 69.95 6.383   48 0.92131 0.0913 49.267, 82.09 0.8
PWK/PhJ m 69.9 12.148   47 1.772 0.1738 1.08
WSB/EiJ f 70.98 6.3885   55 0.86143 0.09 43.912, 81.29 0.87
WSB/EiJ m 68.25 7.0383   52 0.97604 0.1031 44.658, 80.07 0.95


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 25.231125 3.4146492702 31.9333716849 18.5288783151
129S1/SvImJ m 25.1020918367 3.3796263006 31.7355957128 18.4685879607
A/J f 64.3328542373 3.0799290732 70.3781147566 58.287593718
A/J m 55.2908095082 3.029017648 61.2361414834 49.345477533
C57BL/6J f 59.1140655738 3.029017648 65.059397549 53.1687335986
C57BL/6J m 57.5466949153 3.0799290732 63.5919554345 51.501434396
C57BL/6NJ f 64.9462076923 6.5613778023 77.8248283483 52.0675870363
C57BL/6NJ m 56.0889230769 6.5613778023 68.9675437329 43.2103024209
CAST/EiJ f 63.2698181818 4.1182219709 71.3530318205 55.1866045432
CAST/EiJ m 66.6293 4.3192276418 75.1070459859 58.1515540141
DBA/2J f 68.8923478261 4.9329055846 78.5746160431 59.210079609
DBA/2J m 60.467576 4.7314768208 69.7544814265 51.1806705735
NOD/ShiLtJ f 48.2488510638 3.4507841312 55.0220229692 41.4756791584
NOD/ShiLtJ m 49.1418181818 3.5664848452 56.1420865371 42.1415498265
NZO/HlLtJ f 54.2649553191 3.4507841312 61.0381272245 47.4917834138
NZO/HlLtJ m 50.6612217391 3.4880909898 57.5076192527 43.8148242256
PWK/PhJ f 69.9462083333 3.4146492702 76.6484550182 63.2439616484
PWK/PhJ m 69.8980851064 3.4507841312 76.6712570118 63.124913201
WSB/EiJ f 70.9844 3.1899610218 77.2456303613 64.7231696387
WSB/EiJ m 68.2481730769 3.2806889012 74.6874834049 61.8088627489


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 25.1666084184 2.4021710789 29.8815708864 20.4516459503
A/J both 59.8118318727 2.1599138298 64.0512937207 55.5723700248
C57BL/6J both 58.3303802445 2.1599138298 62.5698420925 54.0909183965
C57BL/6NJ both 60.5175653846 4.639594738 69.6241253828 51.4110053864
CAST/EiJ both 64.9495590909 2.9839353052 70.8064037988 59.092714383
DBA/2J both 64.679961913 3.4176172406 71.3880341068 57.9718897193
NOD/ShiLtJ both 48.6953346228 2.4813164485 53.5656429987 43.8250262469
NZO/HlLtJ both 52.4630885291 2.4532982836 57.2784030717 47.6477739866
PWK/PhJ both 69.9221467199 2.4273308777 74.6864926426 65.1578007971
WSB/EiJ both 69.6162865385 2.2879450926 74.1070471404 65.1255259365




  GWAS USING LINEAR MIXED MODELS