Project measure / variable:   CSNA03   pct_dist_perimeter_OFT_do

ID, description, units MPD:90117   pct_dist_perimeter_OFT_do   percentage of total distance traveled in perimeter, 60 min test (OFT), DO   [%]  
Data set, strains CSNA03   DO population w/par   9 strains     sex: both     age: 4-25wks
Procedure open field test
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Plot Options Bins number: (min: 10, max: 40)


Distribution of Individual Animals with Boxplots.





  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested9 strains9 strains
Mean of the strain means56.28   % 58.23   %
Median of the strain means55.89   % 57.4   %
SD of the strain means± 11.566 ± 10.53
Coefficient of variation (CV)0.2055 0.1808
Min–max range of strain means39.62   –   74.9   % 41.268   –   76.26   %
Mean sample size per strain208.0   mice 196.8   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 2378.1241 2378.1241 26.4536 < 0.0001
strain 8 94680.1815 11835.0227 131.6496 < 0.0001
sex:strain 8 3897.1315 487.1414 5.4188 < 0.0001
Residuals 3625 325879.9777 89.8979


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 46.083 20.947   48 3.0234 0.4545 -0.88
129S1/SvImJ m 59.04 19.916   49 2.8451 0.3373 14.017, 87.71 0.08
A/J f 72.76 17.032   59 2.2174 0.2341 1.42
A/J m 70.91 18.733   61 2.3986 0.2642 1.2
C57BL/6J f 49.03 5.1411   61 0.65825 0.1049 38.561, 62.84 -0.63
C57BL/6J m 48.187 6.3593   59 0.82791 0.132 26.187, 66.49 -0.95
CAST/EiJ f 52.66 9.2385   33 1.6082 0.1754 16.2, 67.51 -0.31
CAST/EiJ m 55.39 5.2854   30 0.96498 0.0954 39.38, 62.68 -0.27
J:DO f 55.89 9.1284   1474 0.23776 0.1633 -0.03
J:DO m 57.4 8.6798   1383 0.2334 0.1512 33.064, 86.11 -0.08
NOD/ShiLtJ f 39.62 5.9865   47 0.87321 0.1511 24.859, 54.56 -1.44
NOD/ShiLtJ m 41.268 6.3003   44 0.94981 0.1527 30.185, 54.17 -1.61
NZO/HlLtJ f 74.9 8.0465   47 1.1737 0.1074 50.7, 86.97 1.61
NZO/HlLtJ m 76.26 5.847   46 0.8621 0.0767 57.73, 85.89 1.71
PWK/PhJ f 57.78 5.4897   48 0.79236 0.095 41.464, 68.33 0.13
PWK/PhJ m 59.03 5.568   47 0.81217 0.0943 44.566, 68.81 0.08
WSB/EiJ f 57.79 5.5431   55 0.74743 0.0959 37.927, 68.21 0.13
WSB/EiJ m 56.63 5.6534   52 0.78398 0.0998 36.875, 67.62 -0.15


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 46.0828645833 1.3685296618 48.7660293189 43.3996998477
129S1/SvImJ m 59.0408979592 1.3544930891 61.696542329 56.3852535894
A/J f 72.7578813559 1.2343798614 75.1780294951 70.3377332167
A/J m 70.9073360656 1.2139754831 73.2874790008 68.5271931303
C57BL/6J f 49.0299508197 1.2139754831 51.4100937549 46.6498078844
C57BL/6J m 48.1866101695 1.2343798614 50.6067583087 45.7664620303
CAST/EiJ f 52.6596666667 1.6505088737 55.8956850953 49.4236482381
CAST/EiJ m 55.3945333333 1.7310683107 58.7884980941 52.0005685726
J:DO f 55.8934423338 0.2469597016 56.3776361229 55.4092485446
J:DO m 57.4031684743 0.2549551233 57.9030382361 56.9032987126
NOD/ShiLtJ f 39.620212766 1.3830118604 42.3317715699 36.908653962
NOD/ShiLtJ m 41.2676363636 1.4293826138 44.0701105299 38.4651621973
NZO/HlLtJ f 74.8985106383 1.3830118604 77.6100694422 72.1869518344
NZO/HlLtJ m 76.2623913043 1.3979637746 79.0032651095 73.5215174992
PWK/PhJ f 57.778875 1.3685296618 60.4620397356 55.0957102644
PWK/PhJ m 59.0310851064 1.3830118604 61.7426439103 56.3195263024
WSB/EiJ f 57.7901454545 1.2784786761 60.296754551 55.2835363581
WSB/EiJ m 56.6275769231 1.314840769 59.2054782159 54.0496756303


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 52.5618812713 0.9627467169 54.4494604098 50.6743021327
A/J both 71.8326087108 0.8656543935 73.5298268322 70.1353905893
C57BL/6J both 48.6082804946 0.8656543935 50.3054986161 46.9110623731
CAST/EiJ both 54.0271 1.1959072956 56.3718181103 51.6823818897
J:DO both 56.6483054041 0.177476202 56.9962685501 56.300342258
NOD/ShiLtJ both 40.4439245648 0.9944667494 42.3936945897 38.4941545399
NZO/HlLtJ both 75.5804509713 0.9832375757 77.5082048692 73.6526970735
PWK/PhJ both 58.4049800532 0.9728303091 60.3123292704 56.497630836
WSB/EiJ both 57.2088611888 0.9169670077 59.0066837772 55.4110386004




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA