Project measure / variable:   CSNA03   pct_center_time_OFT_do

ID, description, units MPD:90111   pct_center_time_OFT_do   percentage of total time spent in center, 60 min test (OFT), DO   [%]  
Data set, strains CSNA03   DO population w/par   9 strains     sex: both     age: 4-25wks
Procedure open field test
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Plot Options Bins number: (min: 10, max: 40)


Distribution of Individual Animals with Boxplots.





  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested9 strains9 strains
Mean of the strain means31.054   % 29.49   %
Median of the strain means32.481   % 30.871   %
SD of the strain means± 13.677 ± 13.093
Coefficient of variation (CV)0.4404 0.444
Min–max range of strain means9.3896   –   51.75   % 8.4829   –   50.86   %
Mean sample size per strain208.0   mice 196.8   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 2349.4635 2349.4635 17.8701 < 0.0001
strain 8 142047.1094 17755.8887 135.0521 < 0.0001
sex:strain 8 4458.3736 557.2967 4.2388 < 0.0001
Residuals 3625 476594.3979 131.4743


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 38.355 23.797   48 3.4348 0.6204 1.7045, 83.33 0.53
129S1/SvImJ m 25.421 22.251   49 3.1786 0.8753 0.18083, 86.53 -0.31
A/J f 10.822 17.594   59 2.2905 1.6257 0.16103, 100.0 -1.48
A/J m 13.162 20.049   61 2.567 1.5233 0.15337, 94.39 -1.25
C57BL/6J f 40.886 6.5123   61 0.83381 0.1593 24.95, 56.79 0.72
C57BL/6J m 42.454 7.6841   59 1.0004 0.181 24.612, 68.54 0.99
CAST/EiJ f 36.731 11.851   33 2.063 0.3226 17.824, 82.83 0.42
CAST/EiJ m 33.371 7.0304   30 1.2836 0.2107 22.088, 54.98 0.3
J:DO f 32.481 11.334   1474 0.29522 0.349 0.07021, 88.69 0.1
J:DO m 30.871 10.995   1383 0.29565 0.3561 0.39494, 66.82 0.11
NOD/ShiLtJ f 51.75 7.0456   47 1.0277 0.1361 34.917, 68.05 1.51
NOD/ShiLtJ m 50.86 7.6861   44 1.1587 0.1511 31.366, 64.74 1.63
NZO/HlLtJ f 9.3896 6.1255   47 0.89349 0.6524 0.17905, 32.412 -1.58
NZO/HlLtJ m 8.4829 3.3769   46 0.49789 0.3981 1.4077, 17.203 -1.6
PWK/PhJ f 30.053 6.3833   48 0.92134 0.2124 17.908, 50.73 -0.07
PWK/PhJ m 29.038 6.9872   47 1.0192 0.2406 17.816, 50.0 -0.03
WSB/EiJ f 29.015 6.3889   55 0.86148 0.2202 18.708, 56.09 -0.15
WSB/EiJ m 31.752 7.0382   52 0.97602 0.2217 19.93, 55.34 0.17


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 38.3548541667 1.6550070283 41.5996917611 35.1100165723
129S1/SvImJ m 25.4211808163 1.6380321486 28.6327371454 22.2096244873
A/J f 10.8222374576 1.492775351 13.7490006049 7.8954743104
A/J m 13.1618454098 1.4680996787 16.0402289745 10.2834618451
C57BL/6J f 40.8863278689 1.4680996787 43.7647114336 38.0079443042
C57BL/6J m 42.4540338983 1.492775351 45.3807970455 39.5272707511
CAST/EiJ f 36.730969697 1.9960135776 40.6443910811 32.8175483129
CAST/EiJ m 33.3708 2.0934367013 37.4752309743 29.2663690257
J:DO f 32.4809009769 0.2986563268 33.0664521319 31.8953498219
J:DO m 30.8712310557 0.3083254479 31.4757396696 30.2667224418
NOD/ShiLtJ f 51.7509574468 1.672520818 55.0301329032 48.4717819904
NOD/ShiLtJ m 50.8577272727 1.7285984645 54.2468496071 47.4686049384
NZO/HlLtJ f 9.3895648936 1.672520818 12.66874035 6.1103894372
NZO/HlLtJ m 8.4829152174 1.6906026496 11.7975422496 5.1682881852
PWK/PhJ f 30.0531041667 1.6550070283 33.2979417611 26.8082665723
PWK/PhJ m 29.0384893617 1.672520818 32.3176648181 25.7593139053
WSB/EiJ f 29.0153090909 1.546105469 32.0466322604 25.9839859214
WSB/EiJ m 31.7518076923 1.5900793199 34.8693468127 28.634268572


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 31.8880174915 1.1642806345 34.1707277813 29.6053072017
A/J both 11.9920414337 1.0468637585 14.0445420102 9.9395408573
C57BL/6J both 41.6701808836 1.0468637585 43.72268146 39.6176803071
CAST/EiJ both 35.0508848485 1.4462492372 37.8864280307 32.2153416663
J:DO both 31.6760660163 0.2146276912 32.0968690639 31.2552629687
NOD/ShiLtJ both 51.3043423598 1.2026406922 53.6622620929 48.9464226267
NZO/HlLtJ both 8.9362400555 1.1890608905 11.2675349766 6.6049451344
PWK/PhJ both 29.5457967642 1.1764750476 31.8524156473 27.2391778811
WSB/EiJ both 30.3835583916 1.1089177567 32.5577231924 28.2093935908




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA