Project measure / variable:   CSNA03   time_perimeter_corners_OFT_do

ID, description, units MPD:90102   time_perimeter_corners_OFT_do   time in perimeter and corners, 60 min test (OFT), DO   [s]  
Data set, strains CSNA03   DO population w/par   9 strains     sex: both     age: 4-25wks
Procedure open field test
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Plot Options Bins number: (min: 10, max: 40)


Distribution of Individual Animals with Boxplots.





  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested9 strains9 strains
Mean of the strain means153.8   s 133.9   s
Median of the strain means149.8   s 134.1   s
SD of the strain means± 93.88 ± 82.21
Coefficient of variation (CV)0.6104 0.614
Min–max range of strain means16.453   –   288.6   s 14.75   –   240.3   s
Mean sample size per strain208.0   mice 196.8   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 271069.4062 271069.4062 62.7921 < 0.0001
strain 8 6053607.8768 756700.9846 175.2867 < 0.0001
sex:strain 8 39837.1954 4979.6494 1.1535 0.3238
Residuals 3625 15648881.1418 4316.9327


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 16.453 46.444   48 6.7036 2.8228 -1.46
129S1/SvImJ m 14.75 35.245   49 5.035 2.3894 0.04, 187.5 -1.45
A/J f 63.51 63.82   59 8.3085 1.0049 -0.96
A/J m 47.722 53.92   61 6.9039 1.1299 0.05, 195.7 -1.05
C57BL/6J f 135.4 36.332   61 4.6519 0.2683 77.76, 218.9 -0.2
C57BL/6J m 123.0 30.773   59 4.0062 0.2502 73.92, 200.0 -0.13
CAST/EiJ f 239.7 67.59   33 11.767 0.282 95.16, 377.2 0.92
CAST/EiJ m 210.1 61.82   30 11.287 0.2942 77.0, 344.9 0.93
J:DO f 149.8 72.3   1474 1.8833 0.4826 0.16, 757.8 -0.04
J:DO m 134.1 61.69   1383 1.6589 0.46 0.08, 484.5 0.0
NOD/ShiLtJ f 199.9 88.3   47 12.88 0.4417 98.96, 655.8 0.49
NOD/ShiLtJ m 184.3 48.837   44 7.3625 0.265 87.12, 308.0 0.61
NZO/HlLtJ f 57.88 52.55   47 7.6645 0.9079 2.48, 191.5 -1.02
NZO/HlLtJ m 46.255 45.357   46 6.6875 0.9806 1.88, 141.7 -1.07
PWK/PhJ f 232.9 41.627   48 6.0084 0.1787 160.6, 342.8 0.84
PWK/PhJ m 204.4 53.46   47 7.7973 0.2616 0.86
WSB/EiJ f 288.6 99.88   55 13.468 0.3461 126.4, 559.9 1.44
WSB/EiJ m 240.3 75.86   52 10.52 0.3156 120.2, 486.4 1.29


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 16.4529166667 9.4834644785 35.0463736963 -2.1405403629
129S1/SvImJ m 14.7504081633 9.3861956049 33.1531580282 -3.6523417017
A/J f 63.5071186441 8.5538500884 80.2779563918 46.7362808963
A/J m 47.7224590164 8.4124543979 64.2160737406 31.2288442922
C57BL/6J f 135.4085245902 8.4124543979 151.9021393144 118.9149098659
C57BL/6J m 123.0061016949 8.5538500884 139.7769394427 106.2352639472
CAST/EiJ f 239.7018181818 11.4374885047 262.1263710992 217.2772652644
CAST/EiJ m 210.1266666667 11.9957391446 233.6457361827 186.6075971507
J:DO f 149.824504749 1.7113502348 153.1798098829 146.469199615
J:DO m 134.1065220535 1.7667559007 137.5704565677 130.6425875393
NOD/ShiLtJ f 199.9268085106 9.5838213948 218.7170271787 181.1365898425
NOD/ShiLtJ m 184.3231818182 9.9051556006 203.7434143131 164.9029493232
NZO/HlLtJ f 57.8759574468 9.5838213948 76.6661761149 39.0857387787
NZO/HlLtJ m 46.2552173913 9.6874332859 65.2485794623 27.2618553203
PWK/PhJ f 232.9270833333 9.4834644785 251.5205403629 214.3336263037
PWK/PhJ m 204.3659574468 9.5838213948 223.1561761149 185.5757387787
WSB/EiJ f 288.5636363636 8.8594405003 305.9336203627 271.1936523646
WSB/EiJ m 240.35 9.1114179518 258.214015682 222.485984318


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 15.601662415 6.671520937 28.6819705813 2.5213542487
A/J both 55.6147888302 5.9987027833 67.3759571973 43.8536204632
C57BL/6J both 129.2073131425 5.9987027833 140.9684815096 117.4461447755
CAST/EiJ both 224.9142424242 8.2872477476 241.1623746588 208.6661101897
J:DO both 141.9655134012 1.2298522308 144.3767845837 139.5542422188
NOD/ShiLtJ both 192.1249951644 6.8913304231 205.6362659018 178.613724427
NZO/HlLtJ both 52.0655874191 6.8135159095 65.4242935723 38.7068812658
PWK/PhJ both 218.6465203901 6.7413969443 231.8638287574 205.4292120228
WSB/EiJ both 264.4568181818 6.3542824746 276.9151427122 251.9984936515




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA