Project measure / variable:   CSNA03   amb_dist_OFT_do_bin2

ID, description, units MPD:90024   amb_dist_OFT_do_bin2   distance traveled in successive 5 min intervals, 60 min test (OFT), DO   [cm]  5-10 min  
Data set, strains CSNA03   DO population w/par   9 strains     sex: both     age: 4-25wks
Procedure open field test
Ontology mappings

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Plot Options Bins number: (min: 10, max: 40)


Distribution of Individual Animals with Boxplots.





  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested9 strains9 strains
Mean of the strain means1541.0   cm 1433.0   cm
Median of the strain means1550.0   cm 1389.0   cm
SD of the strain means± 874.8 ± 797.3
Coefficient of variation (CV)0.5677 0.5563
Min–max range of strain means414.6   –   2697.0   cm 418.5   –   2455.0   cm
Mean sample size per strain208.0   mice 196.8   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 15886552.6173 15886552.6173 33.9789 < 0.0001
strain 8 535646346.1497 66955793.2687 143.2082 < 0.0001
sex:strain 8 8109910.8223 1013738.8528 2.1682 0.027
Residuals 3625 1694838648.6175 467541.6962


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 414.6 1465.0   48 211.5 3.534 -1.29
129S1/SvImJ m 418.5 832.3   49 118.9 1.9887 -1.27
A/J f 469.6 534.5   59 69.58 1.1383 -1.22
A/J m 476.0 449.5   61 57.55 0.9443 -1.2
C57BL/6J f 1550.0 352.1   61 45.088 0.2272 732.2, 2440.0 0.01
C57BL/6J m 1389.0 290.5   59 37.814 0.2091 832.3, 2203.0 -0.06
CAST/EiJ f 2697.0 2229.0   33 388.0 0.8264 1.32
CAST/EiJ m 2016.0 723.2   30 132.0 0.3587 949.2, 4731.0 0.73
J:DO f 1430.0 637.8   1474 16.613 0.4461 -0.13
J:DO m 1290.0 596.6   1383 16.043 0.4624 -0.18
NOD/ShiLtJ f 2271.0 1008.0   47 147.0 0.4438 1176.0, 7559.0 0.83
NOD/ShiLtJ m 2413.0 597.5   44 90.07 0.2476 1453.0, 3908.0 1.23
NZO/HlLtJ f 679.9 237.1   47 34.589 0.3488 296.1, 1399.0 -0.98
NZO/HlLtJ m 636.5 220.2   46 32.461 0.3459 120.9, 1220.0 -1.0
PWK/PhJ f 1811.0 399.1   48 57.61 0.2204 855.9, 2761.0 0.31
PWK/PhJ m 1805.0 958.1   47 139.7 0.5309 6.4758, 7441.0 0.47
WSB/EiJ f 2546.0 1259.0   55 169.8 0.4946 1328.0, 10623.0 1.15
WSB/EiJ m 2455.0 1012.0   52 140.3 0.4122 1034.0, 6337.0 1.28


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 414.6265083334 98.6937282888 608.1272695985 221.1257470683
129S1/SvImJ m 418.4824979592 97.6814581627 609.9985835675 226.966412351
A/J f 469.5603728813 89.0192986285 644.0932672258 295.0274785368
A/J m 475.9844131147 87.5478039131 647.6322675224 304.336558707
C57BL/6J f 1549.855737705 87.5478039131 1721.5035921126 1378.2078832973
C57BL/6J m 1388.8627118644 89.0192986285 1563.395606209 1214.3298175199
CAST/EiJ f 2697.090909091 119.029114871 2930.4616079144 2463.7202102676
CAST/EiJ m 2016.2066666668 124.8387888666 2260.9679204964 1771.4454128371
J:DO f 1429.8726838534 17.8098980029 1464.791101481 1394.9542662259
J:DO m 1290.3868468546 18.3865007574 1326.4357625785 1254.3379311308
NOD/ShiLtJ f 2270.5106382979 99.7381354508 2466.0590836905 2074.9621929052
NOD/ShiLtJ m 2413.1818181818 103.0822372683 2615.2867718618 2211.0768645018
NZO/HlLtJ f 679.8914893617 99.7381354508 875.4399347544 484.343043969
NZO/HlLtJ m 636.4891304348 100.816416901 834.1516745152 438.8265863543
PWK/PhJ f 1811.2270833333 98.6937282888 2004.7278445984 1617.7263220682
PWK/PhJ m 1804.6058680851 99.7381354508 2000.1543134778 1609.0574226924
WSB/EiJ f 2545.7272727273 92.1995559219 2726.4954387344 2364.9591067201
WSB/EiJ m 2454.8846153846 94.8218670182 2640.7941333521 2268.9750974171


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 416.5545031463 69.4300354176 552.6803233063 280.4286829864
A/J both 472.772392998 62.4280656002 595.1700207641 350.374765232
C57BL/6J both 1469.3592247847 62.4280656002 1591.7568525508 1346.9615970187
CAST/EiJ both 2356.6487878789 86.2447873681 2525.7419237875 2187.5556519703
J:DO both 1360.129765354 12.7989831332 1385.2236899897 1335.0358407184
NOD/ShiLtJ both 2341.8462282398 71.7175768265 2482.4570446779 2201.2354118018
NZO/HlLtJ both 658.1903098982 70.9077668171 797.213397754 519.1672220424
PWK/PhJ both 1807.9164757092 70.1572299673 1945.4680470431 1670.3649043753
WSB/EiJ both 2500.3059440559 66.1285577058 2629.9588255439 2370.653062568




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA