Project measure / variable:   CSNA03   dist_slope_OFT_do

ID, description, units MPD:90018   dist_slope_OFT_do   distance traveled slope, 60 min test (OFT), DO    
Data set, strains CSNA03   DO population w/par   9 strains     sex: both     age: 4-25wks
Procedure open field test
Ontology mappings

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Plot Options Bins number: (min: 10, max: 40)


Distribution of Individual Animals with Boxplots.





  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested9 strains9 strains
Mean of the strain means-14.956   None -15.335   None
Median of the strain means-14.061   None -13.065   None
SD of the strain means± 8.8305 ± 10.491
Coefficient of variation (CV)-0.5904 -0.6841
Min–max range of strain means-28.154   –   -3.8745   None -36.717   –   -4.4325   None
Mean sample size per strain208.0   mice 196.8   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 351.3421 351.3421 2.6691 0.1024
strain 8 65102.2602 8137.7825 61.8212 < 0.0001
sex:strain 8 6187.1865 773.3983 5.8754 < 0.0001
Residuals 3625 477173.6996 131.6341


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f -9.1684 38.144   48 5.5057 -4.1604 -260.4, 9.6223 0.66
129S1/SvImJ m -6.6867 9.125   49 1.3036 -1.3646 -46.777, 1.2104 0.82
A/J f -3.8745 8.7453   59 1.1385 -2.2571 -38.425, 11.715 1.25
A/J m -4.4325 9.1623   61 1.1731 -2.0671 -30.529, 29.225 1.04
C57BL/6J f -17.185 6.7499   61 0.86424 -0.3928 -34.102, 2.255 -0.25
C57BL/6J m -13.065 6.1575   59 0.80163 -0.4713 -26.76, 2.6413 0.22
CAST/EiJ f -28.154 25.976   33 4.5218 -0.9226 -135.1, 5.6108 -1.49
CAST/EiJ m -21.641 11.338   30 2.07 -0.5239 -57.66, 1.635 -0.6
J:DO f -14.061 11.809   1474 0.30759 -0.8399 -201.5, 87.95 0.1
J:DO m -13.182 9.1467   1383 0.24595 -0.6939 -86.22, 24.677 0.21
NOD/ShiLtJ f -22.739 14.2   47 2.0713 -0.6245 -50.72, 33.753 -0.88
NOD/ShiLtJ m -36.717 13.678   44 2.062 -0.3725 -95.26, -17.763 -2.04
NZO/HlLtJ f -10.942 4.4214   47 0.64493 -0.4041 -25.596, -3.5902 0.45
NZO/HlLtJ m -11.275 3.6855   46 0.54339 -0.3269 -22.04, -2.1492 0.39
PWK/PhJ f -3.9951 9.9362   48 1.4342 -2.4871 -32.705, 24.837 1.24
PWK/PhJ m -6.4659 12.632   47 1.8425 -1.9536 -64.63, 11.874 0.85
WSB/EiJ f -24.482 13.687   55 1.8455 -0.559 -95.3, 9.8761 -1.08
WSB/EiJ m -24.552 7.7988   52 1.0815 -0.3176 -43.471, -10.345 -0.88


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f -9.1684395833 1.6560125555 -5.9216305336 -12.4152486331
129S1/SvImJ m -6.6867471429 1.6390273624 -3.4732395791 -9.9002547066
A/J f -3.8744786441 1.4936823116 -0.945937293 -6.8030199952
A/J m -4.432504918 1.4689916472 -1.5523725433 -7.3126372928
C57BL/6J f -17.1852803279 1.4689916472 -14.3051479531 -20.0654127026
C57BL/6J m -13.0652220339 1.4936823116 -10.1366806828 -15.993763385
CAST/EiJ f -28.1544121212 1.997226289 -24.2386130725 -32.0702111699
CAST/EiJ m -21.6405366667 2.0947086037 -17.5336119768 -25.7474613566
J:DO f -14.060811479 0.2988377804 -13.4749045626 -14.6467183954
J:DO m -13.1816807484 0.3085127762 -12.5768048552 -13.7865566416
NOD/ShiLtJ f -22.7392517021 1.6735369859 -19.4580839278 -26.0204194764
NOD/ShiLtJ m -36.7171363636 1.7296487034 -33.3259549114 -40.1083178159
NZO/HlLtJ f -10.9416 1.6735369859 -7.6604322257 -14.2227677743
NZO/HlLtJ m -11.2754108696 1.6916298035 -7.9587699803 -14.5920517588
PWK/PhJ f -3.9951125 1.6560125555 -0.7483034503 -7.2419215497
PWK/PhJ m -6.4659034043 1.6735369859 -3.18473563 -9.7470711785
WSB/EiJ f -24.4820181818 1.5470448312 -21.4488532813 -27.5151830823
WSB/EiJ m -24.5525 1.5910453992 -21.4330667667 -27.6719332333


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both -7.9275933631 1.1649880127 -5.6434961745 -10.2116905517
A/J both -4.1534917811 1.047499798 -2.0997441736 -6.2072393885
C57BL/6J both -15.1252511809 1.047499798 -13.0715035734 -17.1789987884
CAST/EiJ both -24.8974743939 1.4471279301 -22.0602084301 -27.7347403578
J:DO both -13.6212461137 0.2147580919 -13.2001874002 -14.0423048272
NOD/ShiLtJ both -29.7281940329 1.2033713766 -27.3688417062 -32.0875463595
NZO/HlLtJ both -11.1085054348 1.1897833243 -8.7757940965 -13.4412167731
PWK/PhJ both -5.2305079521 1.1771898347 -2.9224876441 -7.5385282601
WSB/EiJ both -24.5172590909 1.1095914983 -22.3417733399 -26.6927448419




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA