Project measure / variable:   CSNA03   pct_dist_center_OFT_do

ID, description, units MPD:90015   pct_dist_center_OFT_do   percentage of total distance traveled in center, 60 min test (OFT), DO   [%]  
Data set, strains CSNA03   DO population w/par   9 strains     sex: both     age: 4-25wks
Procedure open field test
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Plot Options Bins number: (min: 10, max: 40)


Distribution of Individual Animals with Boxplots.





  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested9 strains9 strains
Mean of the strain means32.875   % 31.327   %
Median of the strain means34.83   % 33.447   %
SD of the strain means± 13.807 ± 12.906
Coefficient of variation (CV)0.42 0.412
Min–max range of strain means11.371   –   54.88   % 11.11   –   52.64   %
Mean sample size per strain208.0   mice 196.8   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 1875.8277 1875.8277 15.933 < 0.0001
strain 8 144778.4666 18097.3083 153.7162 < 0.0001
sex:strain 8 3099.177 387.3971 3.2905 0.001
Residuals 3625 426778.4111 117.732


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 37.114 22.184   48 3.202 0.5977 4.1018, 82.79 0.31
129S1/SvImJ m 26.689 20.519   49 2.9313 0.7688 1.0966, 85.56 -0.36
A/J f 12.111 17.357   59 2.2597 1.4331 0.36806, 100.0 -1.5
A/J m 14.72 19.922   61 2.5507 1.3534 0.50859, 96.89 -1.29
C57BL/6J f 42.268 5.9464   61 0.76136 0.1407 28.215, 54.53 0.68
C57BL/6J m 43.464 7.0492   59 0.91773 0.1622 25.056, 69.69 0.94
CAST/EiJ f 38.896 11.522   33 2.0058 0.2962 18.777, 83.65 0.44
CAST/EiJ m 34.879 6.2859   30 1.1476 0.1802 24.926, 55.86 0.28
J:DO f 34.83 10.797   1474 0.28121 0.31 0.19622, 85.76 0.14
J:DO m 33.447 10.214   1383 0.27464 0.3054 0.65507, 64.65 0.16
NOD/ShiLtJ f 54.88 7.0481   47 1.0281 0.1284 38.112, 73.0 1.59
NOD/ShiLtJ m 52.64 7.2961   44 1.0999 0.1386 37.117, 66.08 1.65
NZO/HlLtJ f 11.371 5.9798   47 0.87225 0.5259 0.85716, 40.501 -1.56
NZO/HlLtJ m 11.11 3.6446   46 0.53736 0.328 3.7214, 19.855 -1.57
PWK/PhJ f 32.197 6.5531   48 0.94586 0.2035 21.588, 51.89 -0.05
PWK/PhJ m 30.897 7.1313   47 1.0402 0.2308 18.19, 52.5 -0.03
WSB/EiJ f 32.21 6.1368   55 0.82748 0.1905 22.035, 55.65 -0.05
WSB/EiJ m 34.096 7.2485   52 1.0052 0.2126 21.645, 59.26 0.21


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 37.113975 1.56612563 40.1845500699 34.0433999302
129S1/SvImJ m 26.6891306122 1.5500623784 29.7282117719 23.6500494526
A/J f 12.1113242373 1.4126065309 14.8809069032 9.3417415714
A/J m 14.7201386885 1.3892560544 17.4439399754 11.9963374017
C57BL/6J f 42.268295082 1.3892560544 44.9920963688 39.5444937951
C57BL/6J m 43.463661017 1.4126065309 46.2332436829 40.694078351
CAST/EiJ f 38.8958484848 1.8888185779 42.5991013566 35.1925956131
CAST/EiJ m 34.8790666667 1.9810096371 38.7630710456 30.9950622878
J:DO f 34.8300236974 0.2826171248 35.3841280945 34.2759193004
J:DO m 33.4466032321 0.2917669702 34.0186469863 32.8745594779
NOD/ShiLtJ f 54.8771702128 1.5826988495 57.9802390454 51.7741013801
NOD/ShiLtJ m 52.6418409091 1.6357648716 55.8489519727 49.4347298455
NZO/HlLtJ f 11.3712182979 1.5826988495 14.4742871305 8.2681494652
NZO/HlLtJ m 11.1104347826 1.5998096046 14.2470512803 7.9738182849
PWK/PhJ f 32.1965625 1.56612563 35.2671375698 29.1259874302
PWK/PhJ m 30.8965744681 1.5826988495 33.9996433007 27.7935056355
WSB/EiJ f 32.2098363636 1.4630725792 35.0783637035 29.3413090238
WSB/EiJ m 34.0963461538 1.5046848345 37.0464592562 31.1462330515


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 31.9015528061 1.1017534735 34.0616711799 29.7414344324
A/J both 13.4157314629 0.9906424173 15.3580034311 11.4734594947
C57BL/6J both 42.8659780495 0.9906424173 44.8082500176 40.9237060813
CAST/EiJ both 36.8874575758 1.3685790809 39.5707192033 34.2041959482
J:DO both 34.1383134648 0.2031012089 34.5365174764 33.7401094531
NOD/ShiLtJ both 53.7595055609 1.1380534218 55.9907942891 51.5282168327
NZO/HlLtJ both 11.2408265402 1.1252029172 13.4469203298 9.0347327507
PWK/PhJ both 31.546568484 1.1132929912 33.729311451 29.3638255171
WSB/EiJ both 33.1530912587 1.0493638339 35.2104935296 31.0956889879




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA