Project measure / variable:   CSNA03   dist_corners_OFT_do

ID, description, units MPD:90012   dist_corners_OFT_do   distance traveled in corners, 60 min test (OFT), DO   [cm]  
Data set, strains CSNA03   DO population w/par   9 strains     sex: both     age: 4-25wks
Procedure open field test
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Plot Options Bins number: (min: 10, max: 40)


Distribution of Individual Animals with Boxplots.





  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested9 strains9 strains
Mean of the strain means1256.0   cm 1098.0   cm
Median of the strain means1224.0   cm 1135.0   cm
SD of the strain means± 562.7 ± 591.8
Coefficient of variation (CV)0.448 0.5392
Min–max range of strain means590.3   –   2039.0   cm 181.4   –   1888.0   cm
Mean sample size per strain208.0   mice 196.8   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 29296332.3186 29296332.3186 42.7277 < 0.0001
strain 8 258668451.4957 32333556.437 47.1574 < 0.0001
sex:strain 8 4534122.3009 566765.2876 0.8266 0.579
Residuals 3625 2485489191.3655 685652.1907


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 635.2 3467.0   48 500.4 5.4582 -1.1
129S1/SvImJ m 181.4 196.0   49 27.994 1.0801 6.8392, 839.3 -1.55
A/J f 590.3 502.9   59 65.47 0.8519 -1.18
A/J m 497.0 419.3   61 53.69 0.8437 7.4053, 2090.0 -1.01
C57BL/6J f 1230.0 338.3   61 43.316 0.275 654.6, 2177.0 -0.05
C57BL/6J m 1135.0 339.6   59 44.217 0.2992 668.4, 2290.0 0.06
CAST/EiJ f 1647.0 506.5   33 88.17 0.3076 115.2, 3059.0 0.69
CAST/EiJ m 1624.0 425.2   30 77.63 0.2617 1141.0, 2530.0 0.89
J:DO f 1210.0 987.1   1474 25.711 0.8156 25.777, 29297.0 -0.08
J:DO m 1030.0 458.5   1383 12.329 0.4451 13.97, 4992.0 -0.11
NOD/ShiLtJ f 1224.0 516.8   47 75.38 0.4222 340.5, 3714.0 -0.06
NOD/ShiLtJ m 1271.0 408.9   44 61.65 0.3218 481.5, 2099.0 0.29
NZO/HlLtJ f 689.0 552.2   47 80.55 0.8015 228.2, 3669.0 -1.01
NZO/HlLtJ m 550.1 380.3   46 56.08 0.6914 240.2, 2196.0 -0.92
PWK/PhJ f 2039.0 435.7   48 62.88 0.2136 1271.0, 3229.0 1.39
PWK/PhJ m 1888.0 625.5   47 91.24 0.3313 1.34
WSB/EiJ f 2039.0 746.7   55 100.7 0.3663 1114.0, 5177.0 1.39
WSB/EiJ m 1701.0 924.4   52 128.2 0.5436 1.02


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 635.1894125001 119.5174491028 869.5175485106 400.8612764896
129S1/SvImJ m 181.4266367347 118.2915967069 413.3513437136 -50.4980702441
A/J f 590.3269661017 107.8017790741 801.6851413196 378.9687908838
A/J m 497.0381196721 106.0198087524 704.9025306986 289.1737086456
C57BL/6J f 1230.4278688525 106.0198087524 1438.292279879 1022.563457826
C57BL/6J m 1135.2779661017 107.8017790741 1346.6361413196 923.9197908838
CAST/EiJ f 1646.7151515152 144.1434671179 1929.3255169589 1364.1047860715
CAST/EiJ m 1624.4666666667 151.1789437192 1920.8709185286 1328.0624148048
J:DO f 1210.2778046133 21.5676681284 1252.5637763149 1167.9918329117
J:DO m 1030.0646203904 22.2659302323 1073.7196177741 986.4096230068
NOD/ShiLtJ f 1223.9914893617 120.7822192354 1460.7993572431 987.1836214803
NOD/ShiLtJ m 1270.9090909091 124.8319043137 1515.6568467561 1026.161335062
NZO/HlLtJ f 688.9617021276 120.7822192354 925.769570009 452.1538342463
NZO/HlLtJ m 550.1065217391 122.088010906 789.4745490824 310.7384943958
PWK/PhJ f 2039.4791666667 119.5174491028 2273.8073026771 1805.1510306562
PWK/PhJ m 1888.1872340425 120.7822192354 2124.9951019239 1651.3793661612
WSB/EiJ f 2038.6545454545 111.6530495225 2257.5635932203 1819.7454976887
WSB/EiJ m 1700.5673076923 114.8286508339 1925.702498516 1475.4321168686


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 408.3080246174 84.0793115033 573.1554882265 243.4605610083
A/J both 543.6825428869 75.5999725851 691.9052567357 395.4598290381
C57BL/6J both 1182.8529174771 75.5999725851 1331.0756313259 1034.6302036283
CAST/EiJ both 1635.5909090909 104.4418643754 1840.3615729921 1430.8202451898
J:DO both 1120.1712125019 15.4994835205 1150.5597884775 1089.7826365262
NOD/ShiLtJ both 1247.4502901354 86.849508948 1417.7290544328 1077.1715258379
NZO/HlLtJ both 619.5341119334 85.8688344081 787.8901474688 451.178076398
PWK/PhJ both 1963.8332003546 84.9599392706 2130.4072391607 1797.2591615485
WSB/EiJ both 1869.6109265734 80.0812439339 2026.6197044657 1712.6021486811




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA