Project measure / variable:   CSNA03   dist_perimeter_corners_OFT_do

ID, description, units MPD:90006   dist_perimeter_corners_OFT_do   distance traveled in perimeter and corners, 60 min test (OFT), DO   [cm]  
Data set, strains CSNA03   DO population w/par   9 strains     sex: both     age: 4-25wks
Procedure open field test
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Plot Options Bins number: (min: 10, max: 40)


Distribution of Individual Animals with Boxplots.





  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested9 strains9 strains
Mean of the strain means8653.0   cm 7766.0   cm
Median of the strain means8508.0   cm 7667.0   cm
SD of the strain means± 4488.0 ± 4168.0
Coefficient of variation (CV)0.5187 0.5366
Min–max range of strain means1963.0   –   13991.0   cm 1421.0   –   12757.0   cm
Mean sample size per strain208.0   mice 196.8   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 842760246.8077 842760246.8077 70.668 < 0.0001
strain 8 14587010785.6941 1823376348.2118 152.8955 < 0.0001
sex:strain 8 42995844.5806 5374480.5726 0.4507 0.8908
Residuals 3625 43230428832.9108 11925635.5401


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 1963.0 7507.0   48 1084.0 3.8236 8.132, 49992.0 -1.49
129S1/SvImJ m 1421.0 1671.0   49 238.7 1.1756 20.154, 7315.0 -1.52
A/J f 3941.0 3327.0   59 433.1 0.8442 -1.05
A/J m 3313.0 2512.0   61 321.6 0.7582 7.4053, 10158.0 -1.07
C57BL/6J f 8226.0 1829.0   61 234.2 0.2223 5097.0, 12509.0 -0.1
C57BL/6J m 7667.0 1416.0   59 184.3 0.1846 5129.0, 10471.0 -0.02
CAST/EiJ f 12860.0 4424.0   33 770.2 0.344 4325.0, 26644.0 0.94
CAST/EiJ m 11108.0 2634.0   30 480.9 0.2371 5606.0, 16144.0 0.8
J:DO f 8508.0 3908.0   1474 101.8 0.4594 67.3, 64789.0 -0.03
J:DO m 7546.0 2800.0   1383 75.3 0.3711 246.5, 24572.0 -0.05
NOD/ShiLtJ f 10231.0 4307.0   47 628.3 0.421 5002.0, 34116.0 0.35
NOD/ShiLtJ m 9902.0 2762.0   44 416.4 0.2789 4748.0, 19739.0 0.51
NZO/HlLtJ f 4339.0 1793.0   47 261.5 0.4132 1858.0, 11486.0 -0.96
NZO/HlLtJ m 3736.0 1125.0   46 165.8 0.301 1726.0, 6514.0 -0.97
PWK/PhJ f 13818.0 2195.0   48 316.9 0.1589 8536.0, 20562.0 1.15
PWK/PhJ m 12757.0 3271.0   47 477.1 0.2564 13.881, 19747.0 1.2
WSB/EiJ f 13991.0 5314.0   55 716.5 0.3798 7533.0, 36416.0 1.19
WSB/EiJ m 12448.0 5084.0   52 705.0 0.4084 6754.0, 35232.0 1.12


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 1963.2905000005 498.4483327478 2940.5575818128 986.0234181881
129S1/SvImJ m 1421.2933877555 493.3359070098 2388.5369524775 454.0498230335
A/J f 3940.7784745761 449.5880513694 4822.2491789867 3059.3077701655
A/J m 3312.7591032784 442.1563320468 4179.6590404138 2445.8591661431
C57BL/6J f 8226.4098360659 442.1563320468 9093.3097732012 7359.5098989306
C57BL/6J m 7667.3898305087 449.5880513694 8548.8605349193 6785.9191260981
CAST/EiJ f 12859.7878787882 601.1513080373 14038.4163261836 11681.1594313928
CAST/EiJ m 11107.5000000003 630.4928109585 12343.6559443334 9871.3440556671
J:DO f 8507.6317232021 89.9481063271 8683.9856552139 8331.2777911903
J:DO m 7546.105133767 92.8602131715 7728.1685966786 7364.0416708555
NOD/ShiLtJ f 10231.2127659574 503.7230651711 11218.8215863694 9243.6039455454
NOD/ShiLtJ m 9902.4545454544 520.6123042785 10923.1767225218 8881.7323683871
NZO/HlLtJ f 4339.0212765956 503.7230651711 5326.6300970077 3351.4124561836
NZO/HlLtJ m 3736.4999999999 509.1688781968 4734.7859828259 2738.214017174
PWK/PhJ f 13818.1666666666 498.4483327478 14795.433748479 12840.8995848543
PWK/PhJ m 12757.4017234042 503.7230651711 13745.0105438162 11769.7929029922
WSB/EiJ f 13990.9818181817 465.6498009158 14903.9434878074 13078.0201485561
WSB/EiJ m 12447.7307692306 478.8936677407 13386.6586107412 11508.8029277201


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 1692.291943878 350.6533393411 2379.789409817 1004.794477939
A/J both 3626.7687889273 315.2901988261 4244.932623145 3008.6049547095
C57BL/6J both 7946.8998332873 315.2901988261 8565.0636675051 7328.7359990695
CAST/EiJ both 11983.6439393942 435.5755043117 12837.6413831433 11129.6464956451
J:DO both 8026.8684284846 64.6407012301 8153.6041908638 7900.1326661053
NOD/ShiLtJ both 10066.8336557059 362.2064665876 10776.9823980326 9356.6849133792
NZO/HlLtJ both 4037.7606382978 358.1165567625 4739.8906272711 3335.6306493245
PWK/PhJ both 13287.7841950354 354.3260034221 13982.4823545532 12593.0860355176
WSB/EiJ both 13219.3562937062 333.9793714046 13874.1624676557 12564.5501197567




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA