Phenotype measure:   JaxCC1   MCHC


  STRAIN COMPARISON PLOT
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JaxCC1 - mean RBC corpuscular hemoglobin concentration (MCHC)



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested18 strains17 strains
Mean of the strain means31.752   g/dL 31.303   g/dL
Median of the strain means32.069   g/dL 31.425   g/dL
SD of the strain means± 1.3895 ± 1.2439
Coefficient of variation (CV)0.0438 0.0397
Min–max range of strain means27.325   –   33.283   g/dL 27.36   –   32.7   g/dL
Mean sample size per strain5.8   mice 5.9   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 13.8488 13.8488 2.0358 0.1555
strain 16 154.7993 9.675 1.4223 0.1365
sex:strain 16 129.5682 8.098 1.1904 0.2803
Residuals 167 1136.0292 6.8026


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
Strain Sex Mean SD N mice SEM CV Min, Max Z score
CC002/UncJ f 31.15 0.94112   8 0.33274 0.0302 29.7, 32.1 -0.43
CC002/UncJ m 27.36 8.4248   5 3.7677 0.3079 12.3, 31.6 -3.17
CC003/UncJ f 32.92 0.5933   5 0.26533 0.018 32.1, 33.7 0.84
CC003/UncJ m 32.225 0.4113   4 0.20565 0.0128 31.7, 32.7 0.74
CC004/TauUncJ f 32.6 0.5416   7 0.20471 0.0166 31.8, 33.4 0.61
CC004/TauUncJ m 32.125 0.53385   8 0.18875 0.0166 31.5, 33.0 0.66
CC006/TauUncJ f 31.967 0.66583   3 0.38442 0.0208 31.2, 32.4 0.15
CC006/TauUncJ m 31.425 0.73655   4 0.36827 0.0234 30.6, 32.3 0.1
CC009/UncJ f 32.3 0.88994   6 0.36332 0.0276 30.8, 33.4 0.39
CC009/UncJ m 32.562 0.46579   8 0.16468 0.0143 31.8, 33.2 1.01
CC010/GeniUncJ f 31.025 0.65511   4 0.32755 0.0211 30.2, 31.8 -0.52
CC013/GeniUncJ f 31.114 0.98222   7 0.37125 0.0316 29.3, 32.2 -0.46
CC013/GeniUncJ m 31.1 0.43589   3 0.25166 0.014 30.8, 31.6 -0.16
CC017/UncJ f 32.98 0.52154   5 0.23324 0.0158 32.3, 33.6 0.88
CC017/UncJ m 32.02 0.52154   5 0.23324 0.0163 31.7, 32.9 0.58
CC018/UncJ f 32.543 0.83438   7 0.31537 0.0256 31.3, 33.5 0.57
CC018/UncJ m 32.16 0.99146   5 0.4434 0.0308 30.6, 33.3 0.69
CC019/TauUncJ f 31.933 0.87101   6 0.35559 0.0273 30.5, 33.0 0.13
CC019/TauUncJ m 30.712 0.58661   8 0.2074 0.0191 29.8, 31.3 -0.47
CC024/GeniUncJ f 33.283 0.4446   6 0.18151 0.0134 32.8, 34.0 1.1
CC024/GeniUncJ m 30.4 7.9251   7 2.9954 0.2607 12.5, 34.6 -0.73
CC025/GeniUncJ f 27.325 10.066   4 5.0331 0.3684 12.4, 34.3 -3.19
CC025/GeniUncJ m 31.59 2.6126   10 0.82616 0.0827 24.6, 34.3 0.23
CC026/GeniUncJ f 32.171 1.275   7 0.48192 0.0396 30.6, 34.7 0.3
CC026/GeniUncJ m 30.786 1.0024   7 0.37886 0.0326 29.7, 32.4 -0.42
CC032/GeniUncJ f 31.16 1.3183   5 0.58958 0.0423 29.7, 32.7 -0.43
CC032/GeniUncJ m 31.183 0.93256   6 0.38072 0.0299 30.1, 32.5 -0.1
CC040/TauUncJ f 31.329 0.67507   7 0.25515 0.0215 30.6, 32.2 -0.3
CC040/TauUncJ m 30.775 0.51881   4 0.25941 0.0169 30.3, 31.4 -0.42
CC041/TauUncJ f 30.243 1.1058   7 0.41796 0.0366 28.4, 31.6 -1.09
CC041/TauUncJ m 30.825 1.1311   8 0.39989 0.0367 29.5, 33.2 -0.38
CC051/TauUncJ f 32.68 1.7796   5 0.79586 0.0545 29.6, 33.9 0.67
CC051/TauUncJ m 32.2 1.0469   6 0.4274 0.0325 30.7, 33.7 0.72
CC068/TauUncJ f 32.82 0.52631   5 0.23537 0.016 32.0, 33.4 0.77
CC068/TauUncJ m 32.7 0.3   3 0.17321 0.0092 32.4, 33.0 1.12


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
CC002/UncJ f 31.15 0.9221 32.9705 29.3295
CC002/UncJ m 27.36 1.1664 29.6628 25.0572
CC003/UncJ f 32.92 1.1664 35.2228 30.6172
CC003/UncJ m 32.225 1.3041 34.7996 29.6504
CC004/TauUncJ f 32.6 0.9858 34.5462 30.6538
CC004/TauUncJ m 32.125 0.9221 33.9455 30.3045
CC006/TauUncJ f 31.9667 1.5058 34.9396 28.9938
CC006/TauUncJ m 31.425 1.3041 33.9996 28.8504
CC009/UncJ f 32.3 1.0648 34.4022 30.1978
CC009/UncJ m 32.5625 0.9221 34.383 30.742
CC013/GeniUncJ f 31.1143 0.9858 33.0605 29.1681
CC013/GeniUncJ m 31.1 1.5058 34.0729 28.1271
CC017/UncJ f 32.98 1.1664 35.2828 30.6772
CC017/UncJ m 32.02 1.1664 34.3228 29.7172
CC018/UncJ f 32.5429 0.9858 34.4891 30.5966
CC018/UncJ m 32.16 1.1664 34.4628 29.8572
CC019/TauUncJ f 31.9333 1.0648 34.0355 29.8312
CC019/TauUncJ m 30.7125 0.9221 32.533 28.892
CC024/GeniUncJ f 33.2833 1.0648 35.3855 31.1812
CC024/GeniUncJ m 30.4 0.9858 32.3462 28.4538
CC025/GeniUncJ f 27.325 1.3041 29.8996 24.7504
CC025/GeniUncJ m 31.59 0.8248 33.2183 29.9617
CC026/GeniUncJ f 32.1714 0.9858 34.1177 30.2252
CC026/GeniUncJ m 30.7857 0.9858 32.7319 28.8395
CC032/GeniUncJ f 31.16 1.1664 33.4628 28.8572
CC032/GeniUncJ m 31.1833 1.0648 33.2855 29.0812
CC040/TauUncJ f 31.3286 0.9858 33.2748 29.3823
CC040/TauUncJ m 30.775 1.3041 33.3496 28.2004
CC041/TauUncJ f 30.2429 0.9858 32.1891 28.2966
CC041/TauUncJ m 30.825 0.9221 32.6455 29.0045
CC051/TauUncJ f 32.68 1.1664 34.9828 30.3772
CC051/TauUncJ m 32.2 1.0648 34.3022 30.0978
CC068/TauUncJ f 32.82 1.1664 35.1228 30.5172
CC068/TauUncJ m 32.7 1.5058 35.6729 29.7271


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
CC002/UncJ both 29.255 0.7434 30.7228 27.7872
CC003/UncJ both 32.5725 0.8748 34.2996 30.8454
CC004/TauUncJ both 32.3625 0.6749 33.695 31.03
CC006/TauUncJ both 31.6958 0.996 33.6622 29.7294
CC009/UncJ both 32.4313 0.7043 33.8217 31.0408
CC013/GeniUncJ both 31.1071 0.8999 32.8838 29.3305
CC017/UncJ both 32.5 0.8248 34.1283 30.8717
CC018/UncJ both 32.3514 0.7636 33.859 30.8439
CC019/TauUncJ both 31.3229 0.7043 32.7134 29.9325
CC024/GeniUncJ both 31.8417 0.7255 33.2741 30.4093
CC025/GeniUncJ both 29.4575 0.7715 30.9807 27.9343
CC026/GeniUncJ both 31.4786 0.6971 32.8548 30.1024
CC032/GeniUncJ both 31.1717 0.7897 32.7307 29.6127
CC040/TauUncJ both 31.0518 0.8174 32.6655 29.4381
CC041/TauUncJ both 30.5339 0.6749 31.8664 29.2014
CC051/TauUncJ both 32.44 0.7897 33.999 30.881
CC068/TauUncJ both 32.76 0.9524 34.6402 30.8798




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA