Phenotype measure:   JaxCC1   CHr

ID, description, units MPD:89223   CHr   mean corpuscular hemoglobin (CHr)   [pg]
Data set, strains JaxCC1   CC   18 strains     sex: both     age: 17-19wks
Procedure complete blood count
Ontology mappings

  STRAIN COMPARISON PLOT
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JaxCC1 - mean corpuscular hemoglobin (CHr)



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested18 strains17 strains
Mean of the strain means14.554   pg 14.395   pg
Median of the strain means14.577   pg 14.512   pg
SD of the strain means± 0.87687 ± 0.80912
Coefficient of variation (CV)0.0602 0.0562
Min–max range of strain means13.1   –   16.5   pg 12.912   –   15.963   pg
Mean sample size per strain5.8   mice 5.9   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 0.4559 0.4559 9.6065 0.0023
strain 16 139.8262 8.7391 184.1626 < 0.0001
sex:strain 16 2.9172 0.1823 3.8422 < 0.0001
Residuals 167 7.9247 0.0475


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
CC002/UncJ f 13.525 0.10351   8 0.0366 0.0077 13.4, 13.7 -1.17
CC002/UncJ m 13.32 0.08367   5 0.03742 0.0063 13.2, 13.4 -1.33
CC003/UncJ f 16.32 0.25884   5 0.11576 0.0159 16.0, 16.6 2.01
CC003/UncJ m 15.95 0.05774   4 0.02887 0.0036 15.9, 16.0 1.92
CC004/TauUncJ f 14.671 0.18898   7 0.07143 0.0129 14.4, 14.9 0.13
CC004/TauUncJ m 14.512 0.1126   8 0.03981 0.0078 14.4, 14.7 0.15
CC006/TauUncJ f 14.933 0.20817   3 0.12019 0.0139 14.7, 15.1 0.43
CC006/TauUncJ m 14.525 0.63966   4 0.31983 0.044 13.8, 15.2 0.16
CC009/UncJ f 16.5 0.12649   6 0.05164 0.0077 16.3, 16.6 2.22
CC009/UncJ m 15.963 0.17678   8 0.0625 0.0111 15.7, 16.2 1.94
CC010/GeniUncJ f 13.8 0.29439   4 0.1472 0.0213 13.5, 14.2 -0.86
CC013/GeniUncJ f 14.143 0.25071   7 0.09476 0.0177 13.7, 14.5 -0.47
CC013/GeniUncJ m 13.8 0.2   3 0.11547 0.0145 13.6, 14.0 -0.73
CC017/UncJ f 14.76 0.11402   5 0.05099 0.0077 14.6, 14.9 0.24
CC017/UncJ m 14.6 0.25495   5 0.11402 0.0175 14.4, 15.0 0.25
CC018/UncJ f 13.414 0.27946   7 0.10562 0.0208 13.0, 13.7 -1.3
CC018/UncJ m 13.6 0.3937   5 0.17607 0.0289 13.3, 14.2 -0.98
CC019/TauUncJ f 14.483 0.1472   6 0.06009 0.0102 14.3, 14.7 -0.08
CC019/TauUncJ m 14.038 0.23867   8 0.08438 0.017 13.7, 14.3 -0.44
CC024/GeniUncJ f 15.067 0.12111   6 0.04944 0.008 14.9, 15.2 0.59
CC024/GeniUncJ m 14.857 0.07868   7 0.02974 0.0053 14.7, 14.9 0.57
CC025/GeniUncJ f 14.7 0.2708   4 0.1354 0.0184 14.3, 14.9 0.17
CC025/GeniUncJ m 15.01 0.22828   10 0.07219 0.0152 14.6, 15.2 0.76
CC026/GeniUncJ f 14.757 0.12724   7 0.04809 0.0086 14.6, 15.0 0.23
CC026/GeniUncJ m 14.629 0.17043   7 0.06442 0.0117 14.4, 14.9 0.29
CC032/GeniUncJ f 14.36 0.27019   5 0.12083 0.0188 14.0, 14.7 -0.22
CC032/GeniUncJ m 14.333 0.22509   6 0.09189 0.0157 14.0, 14.5 -0.08
CC040/TauUncJ f 14.457 0.25071   7 0.09476 0.0173 14.1, 14.7 -0.11
CC040/TauUncJ m 14.625 0.09574   4 0.04787 0.0065 14.5, 14.7 0.28
CC041/TauUncJ f 13.1 0.19149   7 0.07237 0.0146 12.9, 13.4 -1.66
CC041/TauUncJ m 12.912 0.14577   8 0.05154 0.0113 12.7, 13.1 -1.83
CC051/TauUncJ f 14.06 0.11402   5 0.05099 0.0081 13.9, 14.2 -0.56
CC051/TauUncJ m 13.833 0.05164   6 0.02108 0.0037 13.8, 13.9 -0.69
CC068/TauUncJ f 14.92 0.44385   5 0.19849 0.0297 14.5, 15.6 0.42
CC068/TauUncJ m 14.2 0.1   3 0.05774 0.007 14.1, 14.3 -0.24


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
CC002/UncJ f 13.525 0.077 13.6771 13.3729
CC002/UncJ m 13.32 0.0974 13.5123 13.1277
CC003/UncJ f 16.32 0.0974 16.5123 16.1277
CC003/UncJ m 15.95 0.1089 16.165 15.735
CC004/TauUncJ f 14.6714 0.0823 14.834 14.5089
CC004/TauUncJ m 14.5125 0.077 14.6646 14.3604
CC006/TauUncJ f 14.9333 0.1258 15.1816 14.685
CC006/TauUncJ m 14.525 0.1089 14.74 14.31
CC009/UncJ f 16.5 0.0889 16.6756 16.3244
CC009/UncJ m 15.9625 0.077 16.1146 15.8104
CC013/GeniUncJ f 14.1429 0.0823 14.3054 13.9803
CC013/GeniUncJ m 13.8 0.1258 14.0483 13.5517
CC017/UncJ f 14.76 0.0974 14.9523 14.5677
CC017/UncJ m 14.6 0.0974 14.7923 14.4077
CC018/UncJ f 13.4143 0.0823 13.5768 13.2517
CC018/UncJ m 13.6 0.0974 13.7923 13.4077
CC019/TauUncJ f 14.4833 0.0889 14.6589 14.3078
CC019/TauUncJ m 14.0375 0.077 14.1896 13.8854
CC024/GeniUncJ f 15.0667 0.0889 15.2422 14.8911
CC024/GeniUncJ m 14.8571 0.0823 15.0197 14.6946
CC025/GeniUncJ f 14.7 0.1089 14.915 14.485
CC025/GeniUncJ m 15.01 0.0689 15.146 14.874
CC026/GeniUncJ f 14.7571 0.0823 14.9197 14.5946
CC026/GeniUncJ m 14.6286 0.0823 14.7911 14.466
CC032/GeniUncJ f 14.36 0.0974 14.5523 14.1677
CC032/GeniUncJ m 14.3333 0.0889 14.5089 14.1578
CC040/TauUncJ f 14.4571 0.0823 14.6197 14.2946
CC040/TauUncJ m 14.625 0.1089 14.84 14.41
CC041/TauUncJ f 13.1 0.0823 13.2626 12.9374
CC041/TauUncJ m 12.9125 0.077 13.0646 12.7604
CC051/TauUncJ f 14.06 0.0974 14.2523 13.8677
CC051/TauUncJ m 13.8333 0.0889 14.0089 13.6578
CC068/TauUncJ f 14.92 0.0974 15.1123 14.7277
CC068/TauUncJ m 14.2 0.1258 14.4483 13.9517


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
CC002/UncJ both 13.4225 0.0621 13.5451 13.2999
CC003/UncJ both 16.135 0.0731 16.2793 15.9907
CC004/TauUncJ both 14.592 0.0564 14.7033 14.4807
CC006/TauUncJ both 14.7292 0.0832 14.8934 14.5649
CC009/UncJ both 16.2313 0.0588 16.3474 16.1151
CC013/GeniUncJ both 13.9714 0.0752 14.1198 13.823
CC017/UncJ both 14.68 0.0689 14.816 14.544
CC018/UncJ both 13.5071 0.0638 13.6331 13.3812
CC019/TauUncJ both 14.2604 0.0588 14.3765 14.1443
CC024/GeniUncJ both 14.9619 0.0606 15.0815 14.8423
CC025/GeniUncJ both 14.855 0.0644 14.9822 14.7278
CC026/GeniUncJ both 14.6929 0.0582 14.8078 14.5779
CC032/GeniUncJ both 14.3467 0.066 14.4769 14.2165
CC040/TauUncJ both 14.5411 0.0683 14.6759 14.4063
CC041/TauUncJ both 13.0063 0.0564 13.1175 12.895
CC051/TauUncJ both 13.9467 0.066 14.0769 13.8165
CC068/TauUncJ both 14.56 0.0795 14.717 14.403




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA