Phenotype measure:   JaxCC1   CHCM


  STRAIN COMPARISON PLOT
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JaxCC1 - RBC corpuscular hemoglobin concentration mean (CHCM)



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested18 strains17 strains
Mean of the strain means29.442   g/dL 29.198   g/dL
Median of the strain means29.575   g/dL 29.2   g/dL
SD of the strain means± 0.99386 ± 0.7968
Coefficient of variation (CV)0.0338 0.0273
Min–max range of strain means27.243   –   30.92   g/dL 27.838   –   30.886   g/dL
Mean sample size per strain5.8   mice 5.9   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 3.8234 3.8234 11.8643 0.0007
strain 16 138.5057 8.6566 26.8624 < 0.0001
sex:strain 16 7.932 0.4957 1.5384 0.0916
Residuals 167 53.817 0.3223


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
CC002/UncJ f 29.1 0.23299   8 0.08238 0.008 28.9, 29.5 -0.34
CC002/UncJ m 28.92 0.51672   5 0.23108 0.0179 28.4, 29.6 -0.35
CC003/UncJ f 29.88 0.64187   5 0.28705 0.0215 29.1, 30.8 0.44
CC003/UncJ m 29.35 0.52599   4 0.263 0.0179 28.9, 30.1 0.19
CC004/TauUncJ f 29.014 0.41404   7 0.15649 0.0143 28.5, 29.5 -0.43
CC004/TauUncJ m 28.35 0.32514   8 0.11495 0.0115 27.9, 28.8 -1.06
CC006/TauUncJ f 29.067 0.58595   3 0.3383 0.0202 28.4, 29.5 -0.38
CC006/TauUncJ m 28.65 0.66583   4 0.33292 0.0232 28.1, 29.6 -0.69
CC009/UncJ f 29.767 0.36697   6 0.14981 0.0123 29.3, 30.3 0.33
CC009/UncJ m 29.325 0.64752   8 0.22893 0.0221 28.3, 30.3 0.16
CC010/GeniUncJ f 27.675 0.29861   4 0.1493 0.0108 27.3, 28.0 -1.78
CC013/GeniUncJ f 28.443 0.57982   7 0.21915 0.0204 27.9, 29.6 -1.01
CC013/GeniUncJ m 28.267 0.20817   3 0.12019 0.0074 28.1, 28.5 -1.17
CC017/UncJ f 30.92 0.70852   5 0.31686 0.0229 29.7, 31.5 1.49
CC017/UncJ m 29.94 0.70214   5 0.31401 0.0235 29.1, 31.0 0.93
CC018/UncJ f 29.629 0.56779   7 0.2146 0.0192 28.9, 30.6 0.19
CC018/UncJ m 29.66 0.73007   5 0.3265 0.0246 28.5, 30.4 0.58
CC019/TauUncJ f 29.967 0.33862   6 0.13824 0.0113 29.7, 30.4 0.53
CC019/TauUncJ m 29.2 0.61179   8 0.2163 0.021 27.9, 29.8 0.0
CC024/GeniUncJ f 30.583 0.23166   6 0.09458 0.0076 30.2, 30.9 1.15
CC024/GeniUncJ m 30.886 0.60119   7 0.22723 0.0195 29.6, 31.4 2.12
CC025/GeniUncJ f 29.825 1.3865   4 0.69327 0.0465 27.9, 31.2 0.39
CC025/GeniUncJ m 29.36 0.91554   10 0.28952 0.0312 27.7, 30.3 0.2
CC026/GeniUncJ f 29.086 0.47759   7 0.18051 0.0164 28.5, 29.8 -0.36
CC026/GeniUncJ m 28.471 0.28702   7 0.10848 0.0101 28.2, 28.9 -0.91
CC032/GeniUncJ f 29.52 0.50695   5 0.22672 0.0172 28.7, 30.0 0.08
CC032/GeniUncJ m 28.933 0.77889   6 0.31798 0.0269 27.9, 29.8 -0.33
CC040/TauUncJ f 29.043 0.31015   7 0.11722 0.0107 28.5, 29.4 -0.4
CC040/TauUncJ m 28.9 0.28284   4 0.14142 0.0098 28.5, 29.1 -0.37
CC041/TauUncJ f 27.243 0.4504   7 0.17023 0.0165 26.7, 27.7 -2.21
CC041/TauUncJ m 27.838 0.52082   8 0.18414 0.0187 27.1, 28.4 -1.71
CC051/TauUncJ f 30.9 0.5831   5 0.26077 0.0189 30.2, 31.6 1.47
CC051/TauUncJ m 30.417 0.49565   6 0.20235 0.0163 29.6, 31.0 1.53
CC068/TauUncJ f 30.3 0.31623   5 0.14142 0.0104 29.9, 30.7 0.86
CC068/TauUncJ m 29.9 0.52915   3 0.30551 0.0177 29.5, 30.5 0.88


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
CC002/UncJ f 29.1 0.2007 29.4962 28.7038
CC002/UncJ m 28.92 0.2539 29.4212 28.4188
CC003/UncJ f 29.88 0.2539 30.3812 29.3788
CC003/UncJ m 29.35 0.2838 29.9104 28.7896
CC004/TauUncJ f 29.0143 0.2146 29.4379 28.5907
CC004/TauUncJ m 28.35 0.2007 28.7462 27.9538
CC006/TauUncJ f 29.0667 0.3277 29.7137 28.4196
CC006/TauUncJ m 28.65 0.2838 29.2104 28.0896
CC009/UncJ f 29.7667 0.2318 30.2242 29.3091
CC009/UncJ m 29.325 0.2007 29.7212 28.9288
CC013/GeniUncJ f 28.4429 0.2146 28.8665 28.0193
CC013/GeniUncJ m 28.2667 0.3277 28.9137 27.6196
CC017/UncJ f 30.92 0.2539 31.4212 30.4188
CC017/UncJ m 29.94 0.2539 30.4412 29.4388
CC018/UncJ f 29.6286 0.2146 30.0522 29.205
CC018/UncJ m 29.66 0.2539 30.1612 29.1588
CC019/TauUncJ f 29.9667 0.2318 30.4242 29.5091
CC019/TauUncJ m 29.2 0.2007 29.5962 28.8038
CC024/GeniUncJ f 30.5833 0.2318 31.0409 30.1258
CC024/GeniUncJ m 30.8857 0.2146 31.3093 30.4621
CC025/GeniUncJ f 29.825 0.2838 30.3854 29.2646
CC025/GeniUncJ m 29.36 0.1795 29.7144 29.0056
CC026/GeniUncJ f 29.0857 0.2146 29.5093 28.6621
CC026/GeniUncJ m 28.4714 0.2146 28.895 28.0478
CC032/GeniUncJ f 29.52 0.2539 30.0212 29.0188
CC032/GeniUncJ m 28.9333 0.2318 29.3909 28.4758
CC040/TauUncJ f 29.0429 0.2146 29.4665 28.6193
CC040/TauUncJ m 28.9 0.2838 29.4604 28.3396
CC041/TauUncJ f 27.2429 0.2146 27.6665 26.8193
CC041/TauUncJ m 27.8375 0.2007 28.2337 27.4413
CC051/TauUncJ f 30.9 0.2539 31.4012 30.3988
CC051/TauUncJ m 30.4167 0.2318 30.8742 29.9591
CC068/TauUncJ f 30.3 0.2539 30.8012 29.7988
CC068/TauUncJ m 29.9 0.3277 30.5471 29.2529


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
CC002/UncJ both 29.01 0.1618 29.3295 28.6905
CC003/UncJ both 29.615 0.1904 29.9909 29.2391
CC004/TauUncJ both 28.6821 0.1469 28.9722 28.3921
CC006/TauUncJ both 28.8583 0.2168 29.2863 28.4303
CC009/UncJ both 29.5458 0.1533 29.8485 29.2432
CC013/GeniUncJ both 28.3548 0.1959 28.7415 27.9681
CC017/UncJ both 30.43 0.1795 30.7844 30.0756
CC018/UncJ both 29.6443 0.1662 29.9724 29.3162
CC019/TauUncJ both 29.5833 0.1533 29.886 29.2807
CC024/GeniUncJ both 30.7345 0.1579 31.0463 30.4228
CC025/GeniUncJ both 29.5925 0.1679 29.924 29.261
CC026/GeniUncJ both 28.7786 0.1517 29.0781 28.479
CC032/GeniUncJ both 29.2267 0.1719 29.566 28.8873
CC040/TauUncJ both 28.9714 0.1779 29.3227 28.6202
CC041/TauUncJ both 27.5402 0.1469 27.8302 27.2502
CC051/TauUncJ both 30.6583 0.1719 30.9977 30.319
CC068/TauUncJ both 30.1 0.2073 30.5092 29.6908




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA