Phenotype measure:   JaxCC1   cHGB

ID, description, units MPD:89221   cHGB   calculated hemoglobin (cHGB)   [g/dL]
Data set, strains JaxCC1   CC   18 strains     sex: both     age: 17-19wks
Procedure complete blood count
Ontology mappings

  STRAIN COMPARISON PLOT
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JaxCC1 - calculated hemoglobin (cHGB)



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested18 strains17 strains
Mean of the strain means13.56   g/dL 13.348   g/dL
Median of the strain means13.6   g/dL 13.325   g/dL
SD of the strain means± 0.86881 ± 0.91178
Coefficient of variation (CV)0.0641 0.0683
Min–max range of strain means12.129   –   15.42   g/dL 11.186   –   15.125   g/dL
Mean sample size per strain5.8   mice 5.9   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 1.2426 1.2426 1.1735 0.2802
strain 16 102.1477 6.3842 6.0289 < 0.0001
sex:strain 16 38.583 2.4114 2.2772 0.0049
Residuals 167 176.8434 1.0589


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
Strain Sex Mean SD N mice SEM CV Min, Max Z score
CC002/UncJ f 14.012 0.32266   8 0.11408 0.023 13.6, 14.3 0.52
CC002/UncJ m 13.98 0.63008   5 0.28178 0.0451 13.0, 14.7 0.69
CC003/UncJ f 15.42 0.76616   5 0.34264 0.0497 14.8, 16.4 2.14
CC003/UncJ m 15.125 0.38622   4 0.19311 0.0255 14.6, 15.5 1.95
CC004/TauUncJ f 13.1 0.7303   7 0.27603 0.0557 12.0, 14.1 -0.53
CC004/TauUncJ m 13.325 0.36547   8 0.12921 0.0274 12.9, 14.1 -0.02
CC006/TauUncJ f 14.467 0.76376   3 0.44096 0.0528 13.8, 15.3 1.04
CC006/TauUncJ m 12.4 1.5078   4 0.75388 0.1216 10.8, 14.4 -1.04
CC009/UncJ f 12.833 0.8501   6 0.34705 0.0662 11.4, 13.6 -0.84
CC009/UncJ m 12.838 0.34615   8 0.12238 0.027 12.2, 13.3 -0.56
CC010/GeniUncJ f 13.375 1.1117   4 0.55584 0.0831 12.5, 15.0 -0.21
CC013/GeniUncJ f 12.129 0.65756   7 0.24853 0.0542 11.4, 13.2 -1.65
CC013/GeniUncJ m 12.267 0.55076   3 0.31798 0.0449 11.9, 12.9 -1.19
CC017/UncJ f 14.88 0.58907   5 0.26344 0.0396 14.2, 15.8 1.52
CC017/UncJ m 14.32 0.68337   5 0.30561 0.0477 13.5, 15.2 1.07
CC018/UncJ f 12.471 0.83808   7 0.31677 0.0672 11.7, 14.1 -1.25
CC018/UncJ m 13.2 0.60415   5 0.27019 0.0458 12.6, 14.1 -0.16
CC019/TauUncJ f 13.25 1.2145   6 0.49582 0.0917 11.0, 14.5 -0.36
CC019/TauUncJ m 13.8 0.72703   8 0.25704 0.0527 12.2, 14.4 0.5
CC024/GeniUncJ f 13.683 0.37103   6 0.15147 0.0271 13.2, 14.2 0.14
CC024/GeniUncJ m 11.186 3.941   7 1.4896 0.3523 2.4, 13.9 -2.37
CC025/GeniUncJ f 14.2 1.4306   4 0.71531 0.1007 12.4, 15.7 0.74
CC025/GeniUncJ m 13.51 1.158   10 0.3662 0.0857 10.8, 14.9 0.18
CC026/GeniUncJ f 13.9 0.52281   7 0.1976 0.0376 12.8, 14.4 0.39
CC026/GeniUncJ m 13.214 0.5113   7 0.19325 0.0387 12.4, 13.9 -0.15
CC032/GeniUncJ f 12.4 1.2104   5 0.54129 0.0976 11.4, 14.2 -1.33
CC032/GeniUncJ m 13.433 0.62823   6 0.25647 0.0468 12.6, 14.2 0.09
CC040/TauUncJ f 13.6 0.44721   7 0.16903 0.0329 13.0, 14.3 0.05
CC040/TauUncJ m 14.275 0.49917   4 0.24958 0.035 13.6, 14.8 1.02
CC041/TauUncJ f 12.857 0.3645   7 0.13777 0.0283 12.2, 13.3 -0.81
CC041/TauUncJ m 13.238 0.25036   8 0.08851 0.0189 12.7, 13.5 -0.12
CC051/TauUncJ f 13.9 0.71063   5 0.3178 0.0511 13.1, 14.6 0.39
CC051/TauUncJ m 13.967 0.66232   6 0.27039 0.0474 13.0, 14.6 0.68
CC068/TauUncJ f 13.6 0.5244   5 0.23452 0.0386 13.1, 14.4 0.05
CC068/TauUncJ m 12.833 0.40415   3 0.23333 0.0315 12.6, 13.3 -0.56


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
CC002/UncJ f 14.0125 0.3638 14.7308 13.2942
CC002/UncJ m 13.98 0.4602 14.8886 13.0714
CC003/UncJ f 15.42 0.4602 16.3286 14.5114
CC003/UncJ m 15.125 0.5145 16.1408 14.1092
CC004/TauUncJ f 13.1 0.3889 13.8679 12.3321
CC004/TauUncJ m 13.325 0.3638 14.0433 12.6067
CC006/TauUncJ f 14.4667 0.5941 15.6396 13.2937
CC006/TauUncJ m 12.4 0.5145 13.4158 11.3842
CC009/UncJ f 12.8333 0.4201 13.6627 12.0039
CC009/UncJ m 12.8375 0.3638 13.5558 12.1192
CC013/GeniUncJ f 12.1286 0.3889 12.8965 11.3607
CC013/GeniUncJ m 12.2667 0.5941 13.4396 11.0937
CC017/UncJ f 14.88 0.4602 15.7886 13.9714
CC017/UncJ m 14.32 0.4602 15.2286 13.4114
CC018/UncJ f 12.4714 0.3889 13.2393 11.7035
CC018/UncJ m 13.2 0.4602 14.1086 12.2914
CC019/TauUncJ f 13.25 0.4201 14.0794 12.4206
CC019/TauUncJ m 13.8 0.3638 14.5183 13.0817
CC024/GeniUncJ f 13.6833 0.4201 14.5127 12.8539
CC024/GeniUncJ m 11.1857 0.3889 11.9536 10.4178
CC025/GeniUncJ f 14.2 0.5145 15.2158 13.1842
CC025/GeniUncJ m 13.51 0.3254 14.1525 12.8675
CC026/GeniUncJ f 13.9 0.3889 14.6679 13.1321
CC026/GeniUncJ m 13.2143 0.3889 13.9822 12.4464
CC032/GeniUncJ f 12.4 0.4602 13.3086 11.4914
CC032/GeniUncJ m 13.4333 0.4201 14.2627 12.6039
CC040/TauUncJ f 13.6 0.3889 14.3679 12.8321
CC040/TauUncJ m 14.275 0.5145 15.2908 13.2592
CC041/TauUncJ f 12.8571 0.3889 13.625 12.0893
CC041/TauUncJ m 13.2375 0.3638 13.9558 12.5192
CC051/TauUncJ f 13.9 0.4602 14.8086 12.9914
CC051/TauUncJ m 13.9667 0.4201 14.7961 13.1373
CC068/TauUncJ f 13.6 0.4602 14.5086 12.6914
CC068/TauUncJ m 12.8333 0.5941 14.0063 11.6604


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
CC002/UncJ both 13.9962 0.2933 14.5754 13.4171
CC003/UncJ both 15.2725 0.3452 15.9539 14.5911
CC004/TauUncJ both 13.2125 0.2663 13.7382 12.6868
CC006/TauUncJ both 13.4333 0.393 14.2092 12.6575
CC009/UncJ both 12.8354 0.2779 13.384 12.2868
CC013/GeniUncJ both 12.1976 0.3551 12.8986 11.4966
CC017/UncJ both 14.6 0.3254 15.2425 13.9575
CC018/UncJ both 12.8357 0.3013 13.4305 12.2409
CC019/TauUncJ both 13.525 0.2779 14.0736 12.9764
CC024/GeniUncJ both 12.4345 0.2863 12.9997 11.8694
CC025/GeniUncJ both 13.855 0.3044 14.456 13.254
CC026/GeniUncJ both 13.5571 0.275 14.1001 13.0142
CC032/GeniUncJ both 12.9167 0.3116 13.5318 12.3016
CC040/TauUncJ both 13.9375 0.3225 14.5742 13.3008
CC041/TauUncJ both 13.0473 0.2663 13.5731 12.5216
CC051/TauUncJ both 13.9333 0.3116 14.5484 13.3182
CC068/TauUncJ both 13.2167 0.3758 13.9585 12.4748




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA