Phenotype measure:   JaxCC1   WBC

ID, description, units MPD:89209   WBC   white blood cell count (WBC; units per volume x 103)   [n/µL]
Data set, strains JaxCC1   CC   18 strains     sex: both     age: 17-19wks
Procedure complete blood count
Ontology mappings

  STRAIN COMPARISON PLOT
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JaxCC1 - white blood cell count (WBC; units per volume x 103)



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested18 strains17 strains
Mean of the strain means7.255   n/µL 8.4931   n/µL
Median of the strain means7.1954   n/µL 6.8725   n/µL
SD of the strain means± 2.5933 ± 3.8145
Coefficient of variation (CV)0.3575 0.4491
Min–max range of strain means3.772   –   11.544   n/µL 4.5067   –   18.93   n/µL
Mean sample size per strain5.8   mice 5.9   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 50.6108 50.6108 9.269 0.0027
strain 16 1568.7214 98.0451 17.9562 < 0.0001
sex:strain 16 248.5015 15.5313 2.8444 0.0004
Residuals 167 911.8587 5.4602


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
Strain Sex Mean SD N mice SEM CV Min, Max Z score
CC002/UncJ f 3.9825 0.4383   8 0.15496 0.1101 3.37, 4.73 -1.26
CC002/UncJ m 6.278 2.258   5 1.0098 0.3597 3.49, 9.01 -0.58
CC003/UncJ f 8.938 1.7013   5 0.76085 0.1903 6.44, 10.53 0.65
CC003/UncJ m 8.1725 2.6746   4 1.3373 0.3273 5.38, 11.58 -0.08
CC004/TauUncJ f 4.3029 1.4424   7 0.54519 0.3352 2.56, 6.31 -1.14
CC004/TauUncJ m 5.7075 0.8716   8 0.30816 0.1527 4.28, 6.84 -0.73
CC006/TauUncJ f 8.37 2.0929   3 1.2083 0.25 6.18, 10.35 0.43
CC006/TauUncJ m 18.93 5.4015   4 2.7007 0.2853 12.26, 24.05 2.74
CC009/UncJ f 6.3333 0.88217   6 0.36015 0.1393 5.37, 7.54 -0.36
CC009/UncJ m 6.8725 1.6105   8 0.56941 0.2343 5.05, 9.45 -0.42
CC010/GeniUncJ f 8.0575 5.5115   4 2.7557 0.684 4.15, 16.16 0.31
CC013/GeniUncJ f 10.123 2.0254   7 0.76551 0.2001 7.48, 13.31 1.11
CC013/GeniUncJ m 10.47 3.4521   3 1.9931 0.3297 7.09, 13.99 0.52
CC017/UncJ f 11.544 3.6859   5 1.6484 0.3193 6.78, 16.57 1.65
CC017/UncJ m 14.408 1.0233   5 0.45764 0.071 13.06, 15.77 1.55
CC018/UncJ f 10.086 6.1308   7 2.3172 0.6079 4.37, 19.85 1.09
CC018/UncJ m 12.392 3.2848   5 1.469 0.2651 8.69, 17.17 1.02
CC019/TauUncJ f 5.9017 2.2551   6 0.92064 0.3821 4.05, 10.2 -0.52
CC019/TauUncJ m 7.9075 1.4087   8 0.49807 0.1782 5.39, 9.96 -0.15
CC024/GeniUncJ f 4.2383 1.7644   6 0.72031 0.4163 2.41, 6.8 -1.16
CC024/GeniUncJ m 5.5486 2.4482   7 0.92535 0.4412 2.35, 8.31 -0.77
CC025/GeniUncJ f 9.6325 2.1187   4 1.0594 0.22 7.65, 12.56 0.92
CC025/GeniUncJ m 9.981 2.6476   10 0.83723 0.2653 5.03, 13.53 0.39
CC026/GeniUncJ f 5.0271 1.471   7 0.556 0.2926 3.74, 7.02 -0.86
CC026/GeniUncJ m 5.7843 0.88752   7 0.33545 0.1534 4.76, 6.92 -0.71
CC032/GeniUncJ f 4.978 1.2537   5 0.56066 0.2518 4.25, 7.21 -0.88
CC032/GeniUncJ m 4.5067 1.5461   6 0.6312 0.3431 2.75, 6.39 -1.05
CC040/TauUncJ f 10.887 3.0886   7 1.1674 0.2837 7.49, 17.24 1.4
CC040/TauUncJ m 9.46 1.1009   4 0.55047 0.1164 8.55, 10.9 0.25
CC041/TauUncJ f 6.0586 1.0462   7 0.39542 0.1727 4.42, 7.1 -0.46
CC041/TauUncJ m 6.3275 1.2105   8 0.42799 0.1913 4.08, 7.99 -0.57
CC051/TauUncJ f 8.358 1.6131   5 0.7214 0.193 7.14, 10.66 0.43
CC051/TauUncJ m 5.82 3.0999   6 1.2655 0.5326 2.24, 11.36 -0.7
CC068/TauUncJ f 3.772 0.90715   5 0.40569 0.2405 3.13, 5.36 -1.34
CC068/TauUncJ m 5.8167 1.1163   3 0.64452 0.1919 5.07, 7.1 -0.7


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
CC002/UncJ f 3.9825 0.8262 5.6136 2.3514
CC002/UncJ m 6.278 1.045 8.3411 4.2149
CC003/UncJ f 8.938 1.045 11.0011 6.8749
CC003/UncJ m 8.1725 1.1684 10.4792 5.8658
CC004/TauUncJ f 4.3029 0.8832 6.0465 2.5592
CC004/TauUncJ m 5.7075 0.8262 7.3386 4.0764
CC006/TauUncJ f 8.37 1.3491 11.0335 5.7065
CC006/TauUncJ m 18.93 1.1684 21.2367 16.6233
CC009/UncJ f 6.3333 0.954 8.2167 4.45
CC009/UncJ m 6.8725 0.8262 8.5036 5.2414
CC013/GeniUncJ f 10.1229 0.8832 11.8665 8.3792
CC013/GeniUncJ m 10.47 1.3491 13.1335 7.8065
CC017/UncJ f 11.544 1.045 13.6071 9.4809
CC017/UncJ m 14.408 1.045 16.4711 12.3449
CC018/UncJ f 10.0857 0.8832 11.8294 8.342
CC018/UncJ m 12.392 1.045 14.4551 10.3289
CC019/TauUncJ f 5.9017 0.954 7.785 4.0183
CC019/TauUncJ m 7.9075 0.8262 9.5386 6.2764
CC024/GeniUncJ f 4.2383 0.954 6.1217 2.355
CC024/GeniUncJ m 5.5486 0.8832 7.2922 3.8049
CC025/GeniUncJ f 9.6325 1.1684 11.9392 7.3258
CC025/GeniUncJ m 9.981 0.7389 11.4399 8.5221
CC026/GeniUncJ f 5.0271 0.8832 6.7708 3.2835
CC026/GeniUncJ m 5.7843 0.8832 7.528 4.0406
CC032/GeniUncJ f 4.978 1.045 7.0411 2.9149
CC032/GeniUncJ m 4.5067 0.954 6.39 2.6233
CC040/TauUncJ f 10.8871 0.8832 12.6308 9.1435
CC040/TauUncJ m 9.46 1.1684 11.7667 7.1533
CC041/TauUncJ f 6.0586 0.8832 7.8022 4.3149
CC041/TauUncJ m 6.3275 0.8262 7.9586 4.6964
CC051/TauUncJ f 8.358 1.045 10.4211 6.2949
CC051/TauUncJ m 5.82 0.954 7.7034 3.9366
CC068/TauUncJ f 3.772 1.045 5.8351 1.7089
CC068/TauUncJ m 5.8167 1.3491 8.4802 3.1532


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
CC002/UncJ both 5.1303 0.6661 6.4452 3.8153
CC003/UncJ both 8.5553 0.7838 10.1026 7.0079
CC004/TauUncJ both 5.0052 0.6047 6.199 3.8114
CC006/TauUncJ both 13.65 0.8923 15.4117 11.8883
CC009/UncJ both 6.6029 0.631 7.8487 5.3572
CC013/GeniUncJ both 10.2964 0.8062 11.8882 8.7047
CC017/UncJ both 12.976 0.7389 14.4349 11.5171
CC018/UncJ both 11.2389 0.6841 12.5895 9.8882
CC019/TauUncJ both 6.9046 0.631 8.1503 5.6588
CC024/GeniUncJ both 4.8935 0.65 6.1768 3.6101
CC025/GeniUncJ both 9.8067 0.6912 11.1714 8.4421
CC026/GeniUncJ both 5.4057 0.6245 6.6387 4.1728
CC032/GeniUncJ both 4.7423 0.7075 6.1391 3.3456
CC040/TauUncJ both 10.1736 0.7323 11.6193 8.7278
CC041/TauUncJ both 6.193 0.6047 7.3868 4.9992
CC051/TauUncJ both 7.089 0.7075 8.4857 5.6923
CC068/TauUncJ both 4.7943 0.8532 6.4789 3.1098




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA