Phenotype measure:   JaxCC1   Retic

ID, description, units MPD:89207   Retic   reticulocyte count (Retic; units per volume x 109)   [n/µL]
Data set, strains JaxCC1   CC   18 strains     sex: both     age: 17-19wks
Procedure complete blood count
Ontology mappings

  STRAIN COMPARISON PLOT
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JaxCC1 - reticulocyte count (Retic; units per volume x 109)



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested18 strains17 strains
Mean of the strain means273.1   n/µL 285.8   n/µL
Median of the strain means278.8   n/µL 282.0   n/µL
SD of the strain means± 65.91 ± 56.03
Coefficient of variation (CV)0.2414 0.1961
Min–max range of strain means132.9   –   413.1   n/µL 206.4   –   421.3   n/µL
Mean sample size per strain5.8   mice 5.9   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 10123.3585 10123.3585 2.9153 0.0896
strain 16 491657.6651 30728.6041 8.8492 < 0.0001
sex:strain 16 83483.6284 5217.7268 1.5026 0.1039
Residuals 167 579905.465 3472.4878


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
Strain Sex Mean SD N mice SEM CV Min, Max Z score
CC002/UncJ f 204.1 48.982   8 17.318 0.24 139.0, 281.6 -1.05
CC002/UncJ m 206.4 39.546   5 17.685 0.1916 158.5, 267.9 -1.42
CC003/UncJ f 374.3 50.63   5 22.643 0.1353 317.3, 449.2 1.54
CC003/UncJ m 421.3 67.54   4 33.772 0.1603 337.2, 496.0 2.42
CC004/TauUncJ f 317.5 46.158   7 17.446 0.1454 236.9, 385.4 0.67
CC004/TauUncJ m 304.7 36.36   8 12.855 0.1193 240.5, 343.4 0.34
CC006/TauUncJ f 132.9 88.57   3 51.13 0.6664 31.9, 197.3 -2.13
CC006/TauUncJ m 318.9 81.43   4 40.714 0.2553 229.5, 422.4 0.59
CC009/UncJ f 281.1 39.462   6 16.11 0.1404 240.4, 349.4 0.12
CC009/UncJ m 267.4 37.27   8 13.177 0.1394 206.4, 303.8 -0.33
CC010/GeniUncJ f 353.9 164.9   4 82.46 0.466 254.4, 600.2 1.23
CC013/GeniUncJ f 281.2 52.55   7 19.864 0.1869 220.3, 372.2 0.12
CC013/GeniUncJ m 252.4 25.828   3 14.912 0.1023 235.2, 282.1 -0.6
CC017/UncJ f 413.1 90.57   5 40.506 0.2192 331.6, 512.1 2.12
CC017/UncJ m 375.5 35.44   5 15.849 0.0944 351.0, 436.9 1.6
CC018/UncJ f 276.5 42.058   7 15.896 0.1521 229.3, 343.3 0.05
CC018/UncJ m 286.5 44.265   5 19.796 0.1545 238.0, 356.8 0.01
CC019/TauUncJ f 209.1 89.54   6 36.554 0.4282 140.4, 327.4 -0.97
CC019/TauUncJ m 209.4 31.801   8 11.243 0.1519 151.2, 261.8 -1.36
CC024/GeniUncJ f 271.4 102.7   6 41.942 0.3786 196.5, 475.5 -0.03
CC024/GeniUncJ m 275.4 99.85   7 37.741 0.3626 61.3, 379.3 -0.19
CC025/GeniUncJ f 287.9 125.3   4 62.67 0.4354 195.4, 472.1 0.23
CC025/GeniUncJ m 307.0 50.86   10 16.084 0.1656 243.4, 415.4 0.38
CC026/GeniUncJ f 219.3 47.125   7 17.812 0.2149 163.6, 292.9 -0.82
CC026/GeniUncJ m 265.8 16.305   7 6.1627 0.0613 246.9, 290.5 -0.36
CC032/GeniUncJ f 230.0 26.213   5 11.723 0.1139 205.0, 269.9 -0.65
CC032/GeniUncJ m 222.3 30.008   6 12.251 0.135 189.3, 254.6 -1.13
CC040/TauUncJ f 282.9 31.61   7 11.948 0.1117 222.0, 312.2 0.15
CC040/TauUncJ m 328.9 27.719   4 13.86 0.0843 297.3, 364.4 0.77
CC041/TauUncJ f 246.2 15.93   7 6.0208 0.0647 223.2, 271.5 -0.41
CC041/TauUncJ m 291.8 29.891   8 10.568 0.1024 230.7, 325.3 0.11
CC051/TauUncJ f 288.8 117.8   5 52.68 0.4079 187.8, 493.0 0.24
CC051/TauUncJ m 282.0 82.82   6 33.813 0.2936 182.2, 411.6 -0.07
CC068/TauUncJ f 244.7 38.271   5 17.115 0.1564 199.7, 294.8 -0.43
CC068/TauUncJ m 242.5 98.78   3 57.03 0.4073 164.6, 353.6 -0.77


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
CC002/UncJ f 204.0625 20.8341 245.1947 162.9303
CC002/UncJ m 206.4 26.3533 258.4286 154.3714
CC003/UncJ f 374.3 26.3533 426.3286 322.2714
CC003/UncJ m 421.275 29.4639 479.4447 363.1053
CC004/TauUncJ f 317.5143 22.2726 361.4865 273.5421
CC004/TauUncJ m 304.6875 20.8341 345.8197 263.5553
CC006/TauUncJ f 132.9 34.022 200.0686 65.7314
CC006/TauUncJ m 318.95 29.4639 377.1197 260.7803
CC009/UncJ f 281.1 24.0572 328.5954 233.6046
CC009/UncJ m 267.4125 20.8341 308.5447 226.2803
CC013/GeniUncJ f 281.2143 22.2726 325.1865 237.2421
CC013/GeniUncJ m 252.4 34.022 319.5686 185.2314
CC017/UncJ f 413.12 26.3533 465.1486 361.0914
CC017/UncJ m 375.5 26.3533 427.5286 323.4714
CC018/UncJ f 276.5143 22.2726 320.4865 232.5421
CC018/UncJ m 286.52 26.3533 338.5486 234.4914
CC019/TauUncJ f 209.1167 24.0572 256.6121 161.6213
CC019/TauUncJ m 209.375 20.8341 250.5072 168.2428
CC024/GeniUncJ f 271.3667 24.0572 318.8621 223.8713
CC024/GeniUncJ m 275.3714 22.2726 319.3436 231.3992
CC025/GeniUncJ f 287.85 29.4639 346.0197 229.6803
CC025/GeniUncJ m 307.05 18.6346 343.8398 270.2602
CC026/GeniUncJ f 219.2714 22.2726 263.2436 175.2992
CC026/GeniUncJ m 265.8143 22.2726 309.7865 221.8421
CC032/GeniUncJ f 230.04 26.3533 282.0686 178.0114
CC032/GeniUncJ m 222.35 24.0572 269.8454 174.8546
CC040/TauUncJ f 282.9 22.2726 326.8722 238.9278
CC040/TauUncJ m 328.85 29.4639 387.0197 270.6803
CC041/TauUncJ f 246.2 22.2726 290.1722 202.2278
CC041/TauUncJ m 291.8125 20.8341 332.9447 250.6803
CC051/TauUncJ f 288.78 26.3533 340.8086 236.7514
CC051/TauUncJ m 282.05 24.0572 329.5454 234.5546
CC068/TauUncJ f 244.74 26.3533 296.7686 192.7114
CC068/TauUncJ m 242.5 34.022 309.6686 175.3314


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
CC002/UncJ both 205.2313 16.797 238.3931 172.0694
CC003/UncJ both 397.7875 19.765 436.8089 358.7661
CC004/TauUncJ both 311.1009 15.249 341.2066 280.9952
CC006/TauUncJ both 225.925 22.5034 270.3529 181.4971
CC009/UncJ both 274.2563 15.9123 305.6715 242.841
CC013/GeniUncJ both 266.8071 20.332 306.9481 226.6662
CC017/UncJ both 394.31 18.6346 431.0998 357.5202
CC018/UncJ both 281.5171 17.2523 315.5779 247.4564
CC019/TauUncJ both 209.2458 15.9123 240.6611 177.8306
CC024/GeniUncJ both 273.369 16.3922 305.7317 241.0064
CC025/GeniUncJ both 297.45 17.4311 331.8637 263.0363
CC026/GeniUncJ both 242.5429 15.7491 273.6359 211.4498
CC032/GeniUncJ both 226.195 17.8413 261.4185 190.9715
CC040/TauUncJ both 305.875 18.4675 342.3348 269.4152
CC041/TauUncJ both 269.0063 15.249 299.112 238.9005
CC051/TauUncJ both 285.415 17.8413 320.6385 250.1915
CC068/TauUncJ both 243.62 21.5174 286.1012 201.1388




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA