Phenotype measure:   JaxCC1   RBC

ID, description, units MPD:89206   RBC   red blood cell count (RBC; per volume x 106)   [n/µL]
Data set, strains JaxCC1   CC   18 strains     sex: both     age: 17-19wks
Procedure complete blood count
Ontology mappings

  STRAIN COMPARISON PLOT
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JaxCC1 - red blood cell count (RBC; per volume x 106)



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested18 strains17 strains
Mean of the strain means10.271   n/µL 10.238   n/µL
Median of the strain means10.374   n/µL 10.393   n/µL
SD of the strain means± 0.68845 ± 0.88276
Coefficient of variation (CV)0.067 0.0862
Min–max range of strain means8.475   –   11.443   n/µL 8.2286   –   11.66   n/µL
Mean sample size per strain5.8   mice 5.9   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 0.0701 0.0701 0.1302 0.7187
strain 16 107.9611 6.7476 12.5426 < 0.0001
sex:strain 16 21.9941 1.3746 2.5552 0.0015
Residuals 167 89.8416 0.538


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
Strain Sex Mean SD N mice SEM CV Min, Max Z score
CC002/UncJ f 11.443 0.23572   8 0.08334 0.0206 11.1, 11.71 1.7
CC002/UncJ m 11.66 0.48286   5 0.21594 0.0414 10.94, 12.27 1.61
CC003/UncJ f 10.378 0.55387   5 0.2477 0.0534 9.82, 10.99 0.15
CC003/UncJ m 10.393 0.25264   4 0.12632 0.0243 10.06, 10.63 0.18
CC004/TauUncJ f 9.7729 0.51113   7 0.19319 0.0523 9.16, 10.44 -0.72
CC004/TauUncJ m 10.098 0.3307   8 0.11692 0.0328 9.66, 10.74 -0.16
CC006/TauUncJ f 10.703 0.45654   3 0.26359 0.0427 10.42, 11.23 0.63
CC006/TauUncJ m 9.4075 0.84662   4 0.42331 0.09 8.4, 10.46 -0.94
CC009/UncJ f 8.475 0.51473   6 0.21014 0.0607 7.69, 8.93 -2.61
CC009/UncJ m 8.7937 0.30047   8 0.10623 0.0342 8.22, 9.2 -1.64
CC010/GeniUncJ f 10.678 0.66188   4 0.33094 0.062 10.1, 11.63 0.59
CC013/GeniUncJ f 9.4671 0.61212   7 0.23136 0.0647 8.62, 10.22 -1.17
CC013/GeniUncJ m 9.7733 0.45764   3 0.26422 0.0468 9.39, 10.28 -0.53
CC017/UncJ f 11.042 0.40071   5 0.1792 0.0363 10.67, 11.68 1.12
CC017/UncJ m 10.802 0.33604   5 0.15028 0.0311 10.28, 11.11 0.64
CC018/UncJ f 10.277 0.59743   7 0.22581 0.0581 9.66, 11.45 0.01
CC018/UncJ m 10.738 0.37218   5 0.16645 0.0347 10.38, 11.16 0.57
CC019/TauUncJ f 10.063 0.83337   6 0.34022 0.0828 8.53, 10.8 -0.3
CC019/TauUncJ m 10.859 0.60182   8 0.21277 0.0554 9.66, 11.51 0.7
CC024/GeniUncJ f 9.9583 0.29721   6 0.12134 0.0298 9.49, 10.38 -0.45
CC024/GeniUncJ m 8.2286 2.865   7 1.0829 0.3482 1.84, 10.2 -2.28
CC025/GeniUncJ f 10.6 0.84135   4 0.42067 0.0794 9.59, 11.49 0.48
CC025/GeniUncJ m 9.87 0.76309   10 0.24131 0.0773 8.16, 10.83 -0.42
CC026/GeniUncJ f 10.37 0.36665   7 0.13858 0.0354 9.57, 10.61 0.14
CC026/GeniUncJ m 9.9671 0.37981   7 0.14356 0.0381 9.44, 10.58 -0.31
CC032/GeniUncJ f 9.5 0.81465   5 0.36432 0.0858 8.84, 10.77 -1.12
CC032/GeniUncJ m 10.395 0.38827   6 0.15851 0.0374 9.74, 10.85 0.18
CC040/TauUncJ f 10.411 0.37494   7 0.14171 0.036 9.91, 11.08 0.2
CC040/TauUncJ m 10.73 0.42708   4 0.21354 0.0398 10.13, 11.09 0.56
CC041/TauUncJ f 10.839 0.18721   7 0.07076 0.0173 10.52, 11.13 0.82
CC041/TauUncJ m 11.289 0.16331   8 0.05774 0.0145 10.94, 11.44 1.19
CC051/TauUncJ f 10.868 0.56971   5 0.25478 0.0524 10.16, 11.41 0.87
CC051/TauUncJ m 11.102 0.51277   6 0.20934 0.0462 10.41, 11.61 0.98
CC068/TauUncJ f 10.04 0.53071   5 0.23734 0.0529 9.5, 10.74 -0.34
CC068/TauUncJ m 9.9333 0.2409   3 0.13908 0.0243 9.77, 10.21 -0.34


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
CC002/UncJ f 11.4425 0.2593 11.9545 10.9305
CC002/UncJ m 11.66 0.328 12.3076 11.0124
CC003/UncJ f 10.378 0.328 11.0256 9.7304
CC003/UncJ m 10.3925 0.3667 11.1165 9.6685
CC004/TauUncJ f 9.7729 0.2772 10.3202 9.2255
CC004/TauUncJ m 10.0975 0.2593 10.6095 9.5855
CC006/TauUncJ f 10.7033 0.4235 11.5394 9.8673
CC006/TauUncJ m 9.4075 0.3667 10.1315 8.6835
CC009/UncJ f 8.475 0.2994 9.0662 7.8838
CC009/UncJ m 8.7937 0.2593 9.3057 8.2818
CC013/GeniUncJ f 9.4671 0.2772 10.0145 8.9198
CC013/GeniUncJ m 9.7733 0.4235 10.6094 8.9373
CC017/UncJ f 11.042 0.328 11.6896 10.3944
CC017/UncJ m 10.802 0.328 11.4496 10.1544
CC018/UncJ f 10.2771 0.2772 10.8245 9.7298
CC018/UncJ m 10.738 0.328 11.3856 10.0904
CC019/TauUncJ f 10.0633 0.2994 10.6545 9.4722
CC019/TauUncJ m 10.8587 0.2593 11.3707 10.3468
CC024/GeniUncJ f 9.9583 0.2994 10.5495 9.3672
CC024/GeniUncJ m 8.2286 0.2772 8.7759 7.6813
CC025/GeniUncJ f 10.6 0.3667 11.324 9.876
CC025/GeniUncJ m 9.87 0.2319 10.3279 9.4121
CC026/GeniUncJ f 10.37 0.2772 10.9173 9.8227
CC026/GeniUncJ m 9.9671 0.2772 10.5145 9.4198
CC032/GeniUncJ f 9.5 0.328 10.1476 8.8524
CC032/GeniUncJ m 10.395 0.2994 10.9862 9.8038
CC040/TauUncJ f 10.4114 0.2772 10.9587 9.8641
CC040/TauUncJ m 10.73 0.3667 11.454 10.006
CC041/TauUncJ f 10.8386 0.2772 11.3859 10.2913
CC041/TauUncJ m 11.2887 0.2593 11.8007 10.7768
CC051/TauUncJ f 10.868 0.328 11.5156 10.2204
CC051/TauUncJ m 11.1017 0.2994 11.6928 10.5105
CC068/TauUncJ f 10.04 0.328 10.6876 9.3924
CC068/TauUncJ m 9.9333 0.4235 10.7694 9.0973


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
CC002/UncJ both 11.5512 0.2091 11.964 11.1385
CC003/UncJ both 10.3852 0.246 10.8709 9.8996
CC004/TauUncJ both 9.9352 0.1898 10.3099 9.5605
CC006/TauUncJ both 10.0554 0.2801 10.6084 9.5024
CC009/UncJ both 8.6344 0.1981 9.0254 8.2434
CC013/GeniUncJ both 9.6202 0.2531 10.1199 9.1206
CC017/UncJ both 10.922 0.2319 11.3799 10.4641
CC018/UncJ both 10.5076 0.2147 10.9315 10.0836
CC019/TauUncJ both 10.461 0.1981 10.8521 10.07
CC024/GeniUncJ both 9.0935 0.204 9.4963 8.6906
CC025/GeniUncJ both 10.235 0.217 10.6633 9.8067
CC026/GeniUncJ both 10.1686 0.196 10.5556 9.7816
CC032/GeniUncJ both 9.9475 0.2221 10.3859 9.5091
CC040/TauUncJ both 10.5707 0.2299 11.0245 10.1169
CC041/TauUncJ both 11.0637 0.1898 11.4384 10.6889
CC051/TauUncJ both 10.9848 0.2221 11.4233 10.5464
CC068/TauUncJ both 9.9867 0.2678 10.5154 9.4579




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA