Phenotype measure:   JaxCC1   NEFA

ID, description, units MPD:89199   NEFA   non-esterified fatty acids (plasma NEFA)   [mmol/L]
Data set, strains JaxCC1   CC   18 strains     sex: both     age: 17-19wks
Procedure lipid profile
Ontology mappings

  STRAIN COMPARISON PLOT
Dimensions Width:   px    Height:   px
Download Plot   
Visualization Options

JaxCC1 - non-esterified fatty acids (plasma NEFA)



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested18 strains17 strains
Mean of the strain means1.0125   mmol/L 1.0218   mmol/L
Median of the strain means1.0084   mmol/L 1.0567   mmol/L
SD of the strain means± 0.17089 ± 0.13705
Coefficient of variation (CV)0.1688 0.1341
Min–max range of strain means0.716   –   1.322   mmol/L 0.7325   –   1.2363   mmol/L
Mean sample size per strain5.2   mice 5.2   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 0.0478 0.0478 0.8121 0.369
strain 16 3.2082 0.2005 3.4062 < 0.0001
sex:strain 16 0.8233 0.0515 0.8742 0.5998
Residuals 147 8.6534 0.0589


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
CC002/UncJ f 0.935 0.25169   6 0.10275 0.2692 0.71, 1.29 -0.45
CC002/UncJ m 1.1575 0.47919   4 0.2396 0.414 0.78, 1.86 0.99
CC003/UncJ f 1.2025 0.16153   4 0.08076 0.1343 0.97, 1.33 1.11
CC003/UncJ m 1.0567 0.1861   3 0.10745 0.1761 0.86, 1.23 0.25
CC004/TauUncJ f 1.01 0.08944   7 0.03381 0.0886 0.9, 1.17 -0.01
CC004/TauUncJ m 1.058 0.22084   5 0.09876 0.2087 0.7, 1.28 0.26
CC006/TauUncJ f 0.955 0.27577   2   0.195 0.2888 0.76, 1.15 -0.34
CC006/TauUncJ m 0.94 0.20445   5 0.09143 0.2175 0.72, 1.22 -0.6
CC009/UncJ f 1.322 0.23048   5 0.10307 0.1743 1.08, 1.7 1.81
CC009/UncJ m 1.0212 0.2184   8 0.07722 0.2139 0.8, 1.33 0.0
CC010/GeniUncJ f 1.265 0.0495   2   0.035 0.0391 1.23, 1.3 1.48
CC013/GeniUncJ f 0.87429 0.19173   7 0.07247 0.2193 0.69, 1.24 -0.81
CC013/GeniUncJ m 1.1133 0.38553   3 0.22259 0.3463 0.74, 1.51 0.67
CC017/UncJ f 0.97 0.08888   3 0.05132 0.0916 0.9, 1.07 -0.25
CC017/UncJ m 1.172 0.08289   5 0.03707 0.0707 1.04, 1.26 1.1
CC018/UncJ f 0.74429 0.12541   7 0.0474 0.1685 0.61, 0.91 -1.57
CC018/UncJ m 0.7325 0.09394   4 0.04697 0.1282 0.62, 0.81 -2.11
CC019/TauUncJ f 0.716 0.273   5 0.12209 0.3813 0.27, 0.94 -1.73
CC019/TauUncJ m 0.85167 0.23718   6 0.09683 0.2785 0.55, 1.17 -1.24
CC024/GeniUncJ f 1.0067 0.18085   6 0.07383 0.1797 0.86, 1.3 -0.03
CC024/GeniUncJ m 1.0914 0.246   7 0.09298 0.2254 0.79, 1.49 0.51
CC025/GeniUncJ f 1.04 0.29698   2   0.21 0.2856 0.83, 1.25 0.16
CC025/GeniUncJ m 1.1117 0.43347   6 0.17696 0.3899 0.53, 1.6 0.66
CC026/GeniUncJ f 0.87143 0.26879   7 0.10159 0.3084 0.54, 1.36 -0.83
CC026/GeniUncJ m 0.85 0.12477   7 0.04716 0.1468 0.69, 1.05 -1.25
CC032/GeniUncJ f 0.83833 0.11496   6 0.04693 0.1371 0.7, 1.02 -1.02
CC032/GeniUncJ m 0.84 0.09028   5 0.04037 0.1075 0.78, 0.99 -1.33
CC040/TauUncJ f 1.1171 0.12352   7 0.04669 0.1106 0.93, 1.31 0.61
CC040/TauUncJ m 0.99 0.17049   4 0.08524 0.1722 0.85, 1.23 -0.23
CC041/TauUncJ f 1.172 0.15928   5 0.07123 0.1359 1.01, 1.43 0.93
CC041/TauUncJ m 1.2363 0.46803   8 0.16547 0.3786 0.88, 2.06 1.57
CC051/TauUncJ f 1.165 0.25134   8 0.08886 0.2157 0.76, 1.58 0.89
CC051/TauUncJ m 1.0483 0.18766   6 0.07661 0.179 0.87, 1.28 0.19
CC068/TauUncJ f 1.02 0.37256   5 0.16661 0.3653 0.57, 1.57 0.04
CC068/TauUncJ m 1.1 0.14   3 0.08083 0.1273 1.0, 1.26 0.57


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
CC002/UncJ f 0.935 0.0991 1.1307 0.7393
CC002/UncJ m 1.1575 0.1213 1.3972 0.9178
CC003/UncJ f 1.2025 0.1213 1.4422 0.9628
CC003/UncJ m 1.0567 0.1401 1.3335 0.7798
CC004/TauUncJ f 1.01 0.0917 1.1912 0.8288
CC004/TauUncJ m 1.058 0.1085 1.2724 0.8436
CC006/TauUncJ f 0.955 0.1716 1.294 0.616
CC006/TauUncJ m 0.94 0.1085 1.1544 0.7256
CC009/UncJ f 1.322 0.1085 1.5364 1.1076
CC009/UncJ m 1.0212 0.0858 1.1908 0.8517
CC013/GeniUncJ f 0.8743 0.0917 1.0555 0.6931
CC013/GeniUncJ m 1.1133 0.1401 1.3902 0.8365
CC017/UncJ f 0.97 0.1401 1.2468 0.6932
CC017/UncJ m 1.172 0.1085 1.3864 0.9576
CC018/UncJ f 0.7443 0.0917 0.9255 0.5631
CC018/UncJ m 0.7325 0.1213 0.9722 0.4928
CC019/TauUncJ f 0.716 0.1085 0.9304 0.5016
CC019/TauUncJ m 0.8517 0.0991 1.0474 0.6559
CC024/GeniUncJ f 1.0067 0.0991 1.2024 0.8109
CC024/GeniUncJ m 1.0914 0.0917 1.2727 0.9102
CC025/GeniUncJ f 1.04 0.1716 1.379 0.701
CC025/GeniUncJ m 1.1117 0.0991 1.3074 0.9159
CC026/GeniUncJ f 0.8714 0.0917 1.0527 0.6902
CC026/GeniUncJ m 0.85 0.0917 1.0312 0.6688
CC032/GeniUncJ f 0.8383 0.0991 1.0341 0.6426
CC032/GeniUncJ m 0.84 0.1085 1.0544 0.6256
CC040/TauUncJ f 1.1171 0.0917 1.2984 0.9359
CC040/TauUncJ m 0.99 0.1213 1.2297 0.7503
CC041/TauUncJ f 1.172 0.1085 1.3864 0.9576
CC041/TauUncJ m 1.2363 0.0858 1.4058 1.0667
CC051/TauUncJ f 1.165 0.0858 1.3345 0.9955
CC051/TauUncJ m 1.0483 0.0991 1.2441 0.8526
CC068/TauUncJ f 1.02 0.1085 1.2344 0.8056
CC068/TauUncJ m 1.1 0.1401 1.3768 0.8232


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
CC002/UncJ both 1.0463 0.0783 1.201 0.8915
CC003/UncJ both 1.1296 0.0927 1.3127 0.9465
CC004/TauUncJ both 1.034 0.071 1.1744 0.8936
CC006/TauUncJ both 0.9475 0.1015 1.1481 0.7469
CC009/UncJ both 1.1716 0.0692 1.3083 1.035
CC013/GeniUncJ both 0.9938 0.0837 1.1592 0.8284
CC017/UncJ both 1.071 0.0886 1.2461 0.8959
CC018/UncJ both 0.7384 0.076 0.8887 0.5881
CC019/TauUncJ both 0.7838 0.0735 0.929 0.6387
CC024/GeniUncJ both 1.049 0.0675 1.1824 0.9157
CC025/GeniUncJ both 1.0758 0.0991 1.2716 0.8801
CC026/GeniUncJ both 0.8607 0.0648 0.9889 0.7326
CC032/GeniUncJ both 0.8392 0.0735 0.9843 0.694
CC040/TauUncJ both 1.0536 0.076 1.2038 0.9033
CC041/TauUncJ both 1.2041 0.0692 1.3408 1.0675
CC051/TauUncJ both 1.1067 0.0655 1.2361 0.9772
CC068/TauUncJ both 1.06 0.0886 1.2351 0.8849




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA