Phenotype measure:   JaxCC1   total_protein

ID, description, units MPD:89194   total_protein   total protein (plasma TP)   [g/L]
Data set, strains JaxCC1   CC   18 strains     sex: both     age: 17-19wks
Procedure metabolic panel
Ontology mappings

  STRAIN COMPARISON PLOT
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JaxCC1 - total protein (plasma TP)



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested18 strains17 strains
Mean of the strain means50.34   g/L 48.315   g/L
Median of the strain means48.0   g/L 48.0   g/L
SD of the strain means± 8.1101 ± 3.0243
Coefficient of variation (CV)0.1611 0.0626
Min–max range of strain means44.6   –   80.0   g/L 43.375   –   55.25   g/L
Mean sample size per strain5.8   mice 5.5   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 18.1457 18.1457 0.9471 0.3319
strain 16 1874.6768 117.1673 6.1154 < 0.0001
sex:strain 16 125.2494 7.8281 0.4086 0.9789
Residuals 161 3084.6667 19.1594


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
CC002/UncJ f 44.857 1.5736   7 0.59476 0.0351 43.0, 47.0 -0.68
CC002/UncJ m 47.2 1.7889   5 0.8 0.0379 45.0, 49.0 -0.37
CC003/UncJ f 47.8 3.2711   5 1.4629 0.0684 44.0, 52.0 -0.31
CC003/UncJ m 47.75 2.3629   4 1.1815 0.0495 46.0, 51.0 -0.19
CC004/TauUncJ f 50.14 1.8645   7 0.7047 0.0372 47.0, 53.0 -0.02
CC004/TauUncJ m 48.6 1.1402   5 0.5099 0.0235 47.0, 50.0 0.09
CC006/TauUncJ f 48.0 2.8284   2   2.0 0.0589 46.0, 50.0 -0.29
CC006/TauUncJ m 50.17 6.3061   6 2.5744 0.1257 44.0, 59.0 0.61
CC009/UncJ f 44.667 3.2042   6 1.3081 0.0717 40.0, 48.0 -0.7
CC009/UncJ m 43.375 1.3025   8 0.46049 0.03 42.0, 45.0 -1.63
CC010/GeniUncJ f 80.0 26.153   3 15.1 0.3269 50.0, 98.0 3.66
CC013/GeniUncJ f 49.571 2.8785   7 1.088 0.0581 46.0, 55.0 -0.09
CC013/GeniUncJ m 48.0 2.6458   3 1.5275 0.0551 46.0, 51.0 -0.1
CC017/UncJ f 48.0 1.5811   5 0.70711 0.0329 46.0, 50.0 -0.29
CC017/UncJ m 48.0 2.0   5 0.89443 0.0417 45.0, 50.0 -0.1
CC018/UncJ f 58.57 16.612   7 6.2787 0.2836 42.0, 87.0 1.02
CC018/UncJ m 55.25 12.527   4 6.2633 0.2267 48.0, 74.0 2.29
CC019/TauUncJ f 47.0 3.8471   6 1.5706 0.0819 41.0, 53.0 -0.41
CC019/TauUncJ m 48.143 2.7343   7 1.0335 0.0568 43.0, 51.0 -0.06
CC024/GeniUncJ f 49.167 2.3166   6 0.94575 0.0471 47.0, 53.0 -0.14
CC024/GeniUncJ m 47.857 3.3381   7 1.2617 0.0698 44.0, 53.0 -0.15
CC025/GeniUncJ f 47.0 2.6458   3 1.5275 0.0563 44.0, 49.0 -0.41
CC025/GeniUncJ m 44.667 2.4221   6 0.98883 0.0542 42.0, 48.0 -1.21
CC026/GeniUncJ f 47.286 1.7995   7 0.68014 0.0381 45.0, 50.0 -0.38
CC026/GeniUncJ m 45.857 2.1931   7 0.8289 0.0478 44.0, 50.0 -0.81
CC032/GeniUncJ f 53.5 2.5884   6 1.0567 0.0484 49.0, 56.0 0.39
CC032/GeniUncJ m 52.83 1.6021   6 0.65405 0.0303 50.0, 54.0 1.49
CC040/TauUncJ f 49.286 1.6036   7 0.60609 0.0325 47.0, 51.0 -0.13
CC040/TauUncJ m 48.75 1.2583   4 0.62915 0.0258 47.0, 50.0 0.14
CC041/TauUncJ f 46.714 1.496   7 0.56544 0.032 45.0, 49.0 -0.45
CC041/TauUncJ m 48.75 1.9821   8 0.70076 0.0407 46.0, 52.0 0.14
CC051/TauUncJ f 49.875 2.1002   8 0.74252 0.0421 47.0, 53.0 -0.06
CC051/TauUncJ m 51.83 2.0412   6 0.83333 0.0394 49.0, 55.0 1.16
CC068/TauUncJ f 44.6 0.54772   5 0.24495 0.0123 44.0, 45.0 -0.71
CC068/TauUncJ m 44.333 3.2146   3 1.8559 0.0725 42.0, 48.0 -1.32


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
CC002/UncJ f 44.8571 1.6544 48.1243 41.59
CC002/UncJ m 47.2 1.9575 51.0657 43.3343
CC003/UncJ f 47.8 1.9575 51.6657 43.9343
CC003/UncJ m 47.75 2.1886 52.072 43.428
CC004/TauUncJ f 50.1429 1.6544 53.41 46.8757
CC004/TauUncJ m 48.6 1.9575 52.4657 44.7343
CC006/TauUncJ f 48.0 3.0951 54.1122 41.8878
CC006/TauUncJ m 50.1667 1.787 53.6956 46.6378
CC009/UncJ f 44.6667 1.787 48.1956 41.1378
CC009/UncJ m 43.375 1.5476 46.4311 40.3189
CC013/GeniUncJ f 49.5714 1.6544 52.8386 46.3043
CC013/GeniUncJ m 48.0 2.5271 52.9906 43.0094
CC017/UncJ f 48.0 1.9575 51.8657 44.1343
CC017/UncJ m 48.0 1.9575 51.8657 44.1343
CC018/UncJ f 58.5714 1.6544 61.8386 55.3043
CC018/UncJ m 55.25 2.1886 59.572 50.928
CC019/TauUncJ f 47.0 1.787 50.5289 43.4711
CC019/TauUncJ m 48.1429 1.6544 51.41 44.8757
CC024/GeniUncJ f 49.1667 1.787 52.6956 45.6378
CC024/GeniUncJ m 47.8571 1.6544 51.1243 44.59
CC025/GeniUncJ f 47.0 2.5271 51.9906 42.0094
CC025/GeniUncJ m 44.6667 1.787 48.1956 41.1378
CC026/GeniUncJ f 47.2857 1.6544 50.5528 44.0186
CC026/GeniUncJ m 45.8571 1.6544 49.1243 42.59
CC032/GeniUncJ f 53.5 1.787 57.0289 49.9711
CC032/GeniUncJ m 52.8333 1.787 56.3622 49.3044
CC040/TauUncJ f 49.2857 1.6544 52.5528 46.0186
CC040/TauUncJ m 48.75 2.1886 53.072 44.428
CC041/TauUncJ f 46.7143 1.6544 49.9814 43.4472
CC041/TauUncJ m 48.75 1.5476 51.8061 45.6939
CC051/TauUncJ f 49.875 1.5476 52.9311 46.8189
CC051/TauUncJ m 51.8333 1.787 55.3622 48.3044
CC068/TauUncJ f 44.6 1.9575 48.4657 40.7343
CC068/TauUncJ m 44.3333 2.5271 49.324 39.3427


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
CC002/UncJ both 46.0286 1.2815 48.5593 43.4979
CC003/UncJ both 47.775 1.4681 50.6743 44.8757
CC004/TauUncJ both 49.3714 1.2815 51.9021 46.8407
CC006/TauUncJ both 49.0833 1.787 52.6122 45.5544
CC009/UncJ both 44.0208 1.182 46.355 41.6867
CC013/GeniUncJ both 48.7857 1.5103 51.7682 45.8032
CC017/UncJ both 48.0 1.3842 50.7335 45.2665
CC018/UncJ both 56.9107 1.3718 59.6197 54.2017
CC019/TauUncJ both 47.5714 1.2176 49.976 45.1669
CC024/GeniUncJ both 48.5119 1.2176 50.9165 46.1074
CC025/GeniUncJ both 45.8333 1.5476 48.8895 42.7772
CC026/GeniUncJ both 46.5714 1.1698 48.8816 44.2612
CC032/GeniUncJ both 53.1667 1.2636 55.662 50.6714
CC040/TauUncJ both 49.0179 1.3718 51.7268 46.3089
CC041/TauUncJ both 47.7321 1.1327 49.969 45.4953
CC051/TauUncJ both 50.8542 1.182 53.1883 48.52
CC068/TauUncJ both 44.4667 1.5983 47.623 41.3103




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA