Phenotype measure:   JaxCC1   carbon_dioxide

ID, description, units MPD:89190   carbon_dioxide   carbon dioxide (plasma CO2)   [mmol/L]
Data set, strains JaxCC1   CC   18 strains     sex: both     age: 17-19wks
Procedure metabolic panel
Ontology mappings

  STRAIN COMPARISON PLOT
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JaxCC1 - carbon dioxide (plasma CO2)



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested18 strains17 strains
Mean of the strain means17.854   mmol/L 19.22   mmol/L
Median of the strain means17.884   mmol/L 19.125   mmol/L
SD of the strain means± 1.8802 ± 1.8548
Coefficient of variation (CV)0.1053 0.0965
Min–max range of strain means12.825   –   21.38   mmol/L 16.267   –   23.6   mmol/L
Mean sample size per strain6.1   mice 6.1   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 64.8754 64.8754 12.1159 0.0006
strain 16 480.5904 30.0369 5.6096 < 0.0001
sex:strain 16 86.3478 5.3967 1.0079 0.4507
Residuals 174 931.6975 5.3546


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
CC002/UncJ f 16.788 2.8084   8 0.99291 0.1673 13.0, 20.9 -0.57
CC002/UncJ m 16.967 1.2549   6 0.51229 0.074 15.5, 18.6 -1.21
CC003/UncJ f 17.74 2.7264   5 1.2193 0.1537 15.2, 22.3 -0.06
CC003/UncJ m 19.125 1.9873   4 0.99363 0.1039 16.5, 21.3 -0.05
CC004/TauUncJ f 17.05 2.3336   8 0.82505 0.1369 13.4, 19.3 -0.43
CC004/TauUncJ m 18.7 2.6179   7 0.98947 0.14 14.2, 22.0 -0.28
CC006/TauUncJ f 18.133 0.9815   3 0.56667 0.0541 17.0, 18.7 0.15
CC006/TauUncJ m 21.4 1.9908   7 0.75246 0.093 19.0, 23.9 1.18
CC009/UncJ f 20.5 2.3698   6 0.96747 0.1156 17.7, 24.0 1.41
CC009/UncJ m 23.6 2.1922   8 0.77506 0.0929 19.4, 26.4 2.36
CC010/GeniUncJ f 12.825 0.56789   4 0.28395 0.0443 12.2, 13.4 -2.67
CC013/GeniUncJ f 19.471 2.1631   7 0.81758 0.1111 16.2, 22.2 0.86
CC013/GeniUncJ m 21.2 1.6523   3 0.95394 0.0779 19.6, 22.9 1.07
CC017/UncJ f 16.9 1.6837   5 0.75299 0.0996 15.6, 19.5 -0.51
CC017/UncJ m 17.72 1.5123   5 0.67631 0.0853 16.2, 19.6 -0.81
CC018/UncJ f 18.314 3.384   7 1.279 0.1848 14.9, 24.1 0.24
CC018/UncJ m 18.9 2.7704   5 1.239 0.1466 15.0, 22.3 -0.17
CC019/TauUncJ f 16.817 2.0952   6 0.85534 0.1246 13.1, 19.0 -0.55
CC019/TauUncJ m 16.762 2.8147   8 0.99516 0.1679 12.6, 20.9 -1.33
CC024/GeniUncJ f 18.05 2.3797   6 0.97151 0.1318 13.4, 20.1 0.1
CC024/GeniUncJ m 17.914 2.4869   7 0.93997 0.1388 13.4, 21.2 -0.7
CC025/GeniUncJ f 19.6 1.6872   4 0.8436 0.0861 18.1, 22.0 0.93
CC025/GeniUncJ m 18.944 1.7693   9 0.58975 0.0934 16.2, 22.7 -0.15
CC026/GeniUncJ f 18.029 3.5794   7 1.3529 0.1985 14.7, 24.8 0.09
CC026/GeniUncJ m 19.143 3.0088   7 1.1372 0.1572 16.4, 22.6 -0.04
CC032/GeniUncJ f 16.133 2.0265   6 0.82731 0.1256 13.6, 19.0 -0.92
CC032/GeniUncJ m 16.267 2.0675   6 0.84406 0.1271 14.3, 19.2 -1.59
CC040/TauUncJ f 17.457 1.0114   7 0.38226 0.0579 15.8, 18.7 -0.21
CC040/TauUncJ m 20.0 1.9613   4 0.98065 0.0981 18.0, 22.3 0.42
CC041/TauUncJ f 17.014 3.3997   7 1.285 0.1998 10.1, 21.2 -0.45
CC041/TauUncJ m 20.362 1.4152   8 0.50033 0.0695 17.4, 21.7 0.62
CC051/TauUncJ f 19.175 1.4646   8 0.51781 0.0764 16.4, 21.2 0.7
CC051/TauUncJ m 19.567 1.2485   6 0.50968 0.0638 17.3, 20.8 0.19
CC068/TauUncJ f 21.38 2.1429   5 0.95833 0.1002 18.3, 23.2 1.88
CC068/TauUncJ m 20.167 2.7574   3 1.592 0.1367 17.3, 22.8 0.51


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
CC002/UncJ f 16.7875 0.8181 18.4022 15.1728
CC002/UncJ m 16.9667 0.9447 18.8312 15.1021
CC003/UncJ f 17.74 1.0349 19.7825 15.6975
CC003/UncJ m 19.125 1.157 21.4086 16.8414
CC004/TauUncJ f 17.05 0.8181 18.6647 15.4353
CC004/TauUncJ m 18.7 0.8746 20.4262 16.9738
CC006/TauUncJ f 18.1333 1.336 20.7702 15.4965
CC006/TauUncJ m 21.4 0.8746 23.1262 19.6738
CC009/UncJ f 20.5 0.9447 22.3645 18.6355
CC009/UncJ m 23.6 0.8181 25.2147 21.9853
CC013/GeniUncJ f 19.4714 0.8746 21.1976 17.7452
CC013/GeniUncJ m 21.2 1.336 23.8368 18.5632
CC017/UncJ f 16.9 1.0349 18.9425 14.8575
CC017/UncJ m 17.72 1.0349 19.7625 15.6775
CC018/UncJ f 18.3143 0.8746 20.0405 16.5881
CC018/UncJ m 18.9 1.0349 20.9425 16.8575
CC019/TauUncJ f 16.8167 0.9447 18.6812 14.9521
CC019/TauUncJ m 16.7625 0.8181 18.3772 15.1478
CC024/GeniUncJ f 18.05 0.9447 19.9145 16.1855
CC024/GeniUncJ m 17.9143 0.8746 19.6405 16.1881
CC025/GeniUncJ f 19.6 1.157 21.8836 17.3164
CC025/GeniUncJ m 18.9444 0.7713 20.4668 17.4221
CC026/GeniUncJ f 18.0286 0.8746 19.7548 16.3024
CC026/GeniUncJ m 19.1429 0.8746 20.8691 17.4166
CC032/GeniUncJ f 16.1333 0.9447 17.9979 14.2688
CC032/GeniUncJ m 16.2667 0.9447 18.1312 14.4021
CC040/TauUncJ f 17.4571 0.8746 19.1834 15.7309
CC040/TauUncJ m 20.0 1.157 22.2836 17.7164
CC041/TauUncJ f 17.0143 0.8746 18.7405 15.2881
CC041/TauUncJ m 20.3625 0.8181 21.9772 18.7478
CC051/TauUncJ f 19.175 0.8181 20.7897 17.5603
CC051/TauUncJ m 19.5667 0.9447 21.4312 17.7021
CC068/TauUncJ f 21.38 1.0349 23.4225 19.3375
CC068/TauUncJ m 20.1667 1.336 22.8035 17.5298


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
CC002/UncJ both 16.8771 0.6249 18.1103 15.6438
CC003/UncJ both 18.4325 0.7761 19.9644 16.9006
CC004/TauUncJ both 17.875 0.5988 19.0569 16.6931
CC006/TauUncJ both 19.7667 0.7984 21.3425 18.1909
CC009/UncJ both 22.05 0.6249 23.2833 20.8167
CC013/GeniUncJ both 20.3357 0.7984 21.9115 18.7599
CC017/UncJ both 17.31 0.7318 18.7542 15.8658
CC018/UncJ both 18.6071 0.6775 19.9443 17.27
CC019/TauUncJ both 16.7896 0.6249 18.0228 15.5563
CC024/GeniUncJ both 17.9821 0.6437 19.2526 16.7117
CC025/GeniUncJ both 19.2722 0.6953 20.6445 17.9
CC026/GeniUncJ both 18.5857 0.6184 19.8063 17.3651
CC032/GeniUncJ both 16.2 0.668 17.5184 14.8816
CC040/TauUncJ both 18.7286 0.7252 20.1599 17.2973
CC041/TauUncJ both 18.6884 0.5988 19.8702 17.5065
CC051/TauUncJ both 19.3708 0.6249 20.6041 18.1376
CC068/TauUncJ both 20.7733 0.845 22.441 19.1057




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA