Phenotype measure:   JaxCC1   sodium

ID, description, units MPD:89186   sodium   sodium (plasma Na)   [mmol/L]
Data set, strains JaxCC1   CC   18 strains     sex: both     age: 17-19wks
Procedure metabolic panel
Ontology mappings

  STRAIN COMPARISON PLOT
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JaxCC1 - sodium (plasma Na)



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested18 strains17 strains
Mean of the strain means151.0   mmol/L 152.1   mmol/L
Median of the strain means151.1   mmol/L 151.9   mmol/L
SD of the strain means± 2.2276 ± 1.9089
Coefficient of variation (CV)0.0147 0.0125
Min–max range of strain means147.6   –   155.7   mmol/L 148.9   –   156.0   mmol/L
Mean sample size per strain6.1   mice 6.2   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 82.4693 82.4693 29.468 < 0.0001
strain 16 450.2545 28.1409 10.0553 < 0.0001
sex:strain 16 206.9711 12.9357 4.6222 < 0.0001
Residuals 176 492.5553 2.7986


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
Strain Sex Mean SD N mice SEM CV Min, Max Z score
CC002/UncJ f 150.1 1.8439   8 0.65192 0.0123 147.5, 152.9 -0.42
CC002/UncJ m 151.7 1.0147   6 0.41426 0.0067 150.5, 153.2 -0.23
CC003/UncJ f 150.8 1.4849   5 0.66408 0.0098 148.7, 152.8 -0.1
CC003/UncJ m 150.8 1.2754   4 0.6377 0.0085 149.8, 152.6 -0.7
CC004/TauUncJ f 153.4 1.1999   8 0.42424 0.0078 151.4, 155.0 1.06
CC004/TauUncJ m 151.9 1.1281   8 0.39885 0.0074 150.0, 153.3 -0.13
CC006/TauUncJ f 148.6 2.1385   3 1.2347 0.0144 147.3, 151.1 -1.09
CC006/TauUncJ m 148.9 0.79552   7 0.30068 0.0053 147.5, 149.7 -1.7
CC009/UncJ f 152.0 1.1524   6 0.47046 0.0076 150.5, 153.7 0.44
CC009/UncJ m 152.3 0.72592   8 0.25665 0.0048 151.0, 153.0 0.08
CC010/GeniUncJ f 155.7 0.98826   4 0.49413 0.0063 154.2, 156.4 2.1
CC013/GeniUncJ f 151.1 2.9153   7 1.1019 0.0193 148.3, 157.3 0.03
CC013/GeniUncJ m 156.0 1.9502   3 1.126 0.0125 153.8, 157.4 2.02
CC017/UncJ f 153.2 1.9254   5 0.86105 0.0126 150.9, 155.5 0.98
CC017/UncJ m 155.7 0.71554   5 0.32 0.0046 154.7, 156.5 1.86
CC018/UncJ f 151.1 2.0271   7 0.76616 0.0134 148.1, 152.7 0.03
CC018/UncJ m 149.8 1.1946   5 0.53423 0.008 148.7, 151.4 -1.23
CC019/TauUncJ f 149.1 0.89981   6 0.36735 0.006 147.9, 150.7 -0.87
CC019/TauUncJ m 153.5 2.2   8 0.77782 0.0143 150.4, 156.9 0.71
CC024/GeniUncJ f 148.2 1.4959   6 0.61069 0.0101 146.7, 150.4 -1.27
CC024/GeniUncJ m 150.5 2.0873   7 0.78891 0.0139 146.5, 152.6 -0.86
CC025/GeniUncJ f 153.7 2.1577   4 1.0789 0.014 152.1, 156.9 1.2
CC025/GeniUncJ m 152.8 1.3772   10 0.43549 0.009 151.2, 155.8 0.35
CC026/GeniUncJ f 151.6 1.1872   7 0.44873 0.0078 149.7, 153.0 0.26
CC026/GeniUncJ m 151.3 1.0637   7 0.40204 0.007 149.5, 152.7 -0.44
CC032/GeniUncJ f 149.3 1.6769   6 0.68459 0.0112 147.7, 151.9 -0.78
CC032/GeniUncJ m 152.7 2.2217   6 0.90701 0.0145 149.1, 154.8 0.29
CC040/TauUncJ f 147.6 0.78285   7 0.29589 0.0053 146.7, 149.2 -1.54
CC040/TauUncJ m 152.5 2.5395   4 1.2698 0.0166 148.8, 154.4 0.19
CC041/TauUncJ f 151.5 2.4345   7 0.92014 0.0161 148.4, 154.3 0.21
CC041/TauUncJ m 151.5 0.96056   8 0.33961 0.0063 150.6, 153.0 -0.34
CC051/TauUncJ f 148.5 1.9813   8 0.70049 0.0133 146.3, 152.2 -1.13
CC051/TauUncJ m 150.5 1.5414   6 0.62929 0.0102 148.2, 152.7 -0.86
CC068/TauUncJ f 153.0 1.2227   5 0.54681 0.008 151.6, 154.8 0.89
CC068/TauUncJ m 154.0 3.9463   3 2.2784 0.0256 149.5, 156.7 0.97


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
CC002/UncJ f 150.15 0.5915 151.3173 148.9827
CC002/UncJ m 151.7167 0.683 153.0645 150.3688
CC003/UncJ f 150.8 0.7481 152.2765 149.3235
CC003/UncJ m 150.8 0.8365 152.4508 149.1492
CC004/TauUncJ f 153.4375 0.5915 154.6048 152.2702
CC004/TauUncJ m 151.8875 0.5915 153.0548 150.7202
CC006/TauUncJ f 148.6333 0.9659 150.5395 146.7272
CC006/TauUncJ m 148.8571 0.6323 150.105 147.6093
CC009/UncJ f 152.0 0.683 153.3478 150.6522
CC009/UncJ m 152.3125 0.5915 153.4798 151.1452
CC013/GeniUncJ f 151.1286 0.6323 152.3764 149.8807
CC013/GeniUncJ m 156.0333 0.9659 157.9395 154.1272
CC017/UncJ f 153.22 0.7481 154.6965 151.7435
CC017/UncJ m 155.72 0.7481 157.1965 154.2435
CC018/UncJ f 151.1286 0.6323 152.3764 149.8807
CC018/UncJ m 149.78 0.7481 151.2565 148.3035
CC019/TauUncJ f 149.1167 0.683 150.4645 147.7688
CC019/TauUncJ m 153.5 0.5915 154.6673 152.3327
CC024/GeniUncJ f 148.1833 0.683 149.5312 146.8355
CC024/GeniUncJ m 150.5 0.6323 151.7479 149.2521
CC025/GeniUncJ f 153.725 0.8365 155.3758 152.0742
CC025/GeniUncJ m 152.79 0.529 153.834 151.746
CC026/GeniUncJ f 151.5571 0.6323 152.805 150.3093
CC026/GeniUncJ m 151.2857 0.6323 152.5336 150.0379
CC032/GeniUncJ f 149.3 0.683 150.6478 147.9522
CC032/GeniUncJ m 152.7 0.683 154.0478 151.3522
CC040/TauUncJ f 147.6429 0.6323 148.8907 146.395
CC040/TauUncJ m 152.525 0.8365 154.1758 150.8742
CC041/TauUncJ f 151.5 0.6323 152.7479 150.2521
CC041/TauUncJ m 151.4625 0.5915 152.6298 150.2952
CC051/TauUncJ f 148.4625 0.5915 149.6298 147.2952
CC051/TauUncJ m 150.5 0.683 151.8478 149.1522
CC068/TauUncJ f 153.0 0.7481 154.4765 151.5235
CC068/TauUncJ m 154.0333 0.9659 155.9395 152.1272


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
CC002/UncJ both 150.9333 0.4517 151.8248 150.0418
CC003/UncJ both 150.8 0.5611 151.9074 149.6926
CC004/TauUncJ both 152.6625 0.4182 153.4879 151.8371
CC006/TauUncJ both 148.7452 0.5772 149.8844 147.6061
CC009/UncJ both 152.1562 0.4517 153.0478 151.2647
CC013/GeniUncJ both 153.581 0.5772 154.7201 152.4418
CC017/UncJ both 154.47 0.529 155.514 153.426
CC018/UncJ both 150.4543 0.4898 151.4209 149.4877
CC019/TauUncJ both 151.3083 0.4517 152.1998 150.4168
CC024/GeniUncJ both 149.3417 0.4654 150.2601 148.4233
CC025/GeniUncJ both 153.2575 0.4949 154.2341 152.2809
CC026/GeniUncJ both 151.4214 0.4471 152.3038 150.5391
CC032/GeniUncJ both 151.0 0.4829 151.9531 150.0469
CC040/TauUncJ both 150.0839 0.5243 151.1186 149.0493
CC041/TauUncJ both 151.4812 0.4329 152.3356 150.6269
CC051/TauUncJ both 149.4812 0.4517 150.3728 148.5897
CC068/TauUncJ both 153.5167 0.6109 154.7222 152.3111




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA