Phenotype measure:   JaxCC1   phosphate

ID, description, units MPD:89183   phosphate   phosphorus (plasma phosphate)   [mg/dL]
Data set, strains JaxCC1   CC   18 strains     sex: both     age: 17-19wks
Procedure metabolic panel
Ontology mappings

  STRAIN COMPARISON PLOT
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JaxCC1 - phosphorus (plasma phosphate)



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested18 strains17 strains
Mean of the strain means6.068   mg/dL 6.0912   mg/dL
Median of the strain means5.7727   mg/dL 5.7667   mg/dL
SD of the strain means± 1.139 ± 1.1197
Coefficient of variation (CV)0.1877 0.1838
Min–max range of strain means4.4714   –   8.1833   mg/dL 4.4857   –   8.475   mg/dL
Mean sample size per strain5.8   mice 5.6   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 0.7346 0.7346 0.4993 0.4808
strain 16 196.2351 12.2647 8.3364 < 0.0001
sex:strain 16 30.6289 1.9143 1.3012 0.2019
Residuals 164 241.2801 1.4712


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
Strain Sex Mean SD N mice SEM CV Min, Max Z score
CC002/UncJ f 4.4714 0.53452   7 0.20203 0.1195 4.1, 5.6 -1.4
CC002/UncJ m 5.44 1.031   5 0.46109 0.1895 4.2, 6.7 -0.58
CC003/UncJ f 7.78 0.48166   5 0.21541 0.0619 7.1, 8.3 1.5
CC003/UncJ m 6.975 0.29861   4 0.1493 0.0428 6.6, 7.3 0.79
CC004/TauUncJ f 5.4 1.0755   7 0.40649 0.1992 4.4, 7.4 -0.59
CC004/TauUncJ m 5.3 0.46043   6 0.18797 0.0869 4.7, 5.9 -0.71
CC006/TauUncJ f 4.8 0.84853   2   0.6 0.1768 4.2, 5.4 -1.11
CC006/TauUncJ m 6.0286 0.846   7 0.31976 0.1403 4.7, 6.8 -0.06
CC009/UncJ f 8.1833 1.3243   6 0.54063 0.1618 6.4, 9.8 1.86
CC009/UncJ m 8.475 1.5126   8 0.53477 0.1785 5.7, 11.0 2.13
CC010/GeniUncJ f 8.0 2.6153   3 1.51 0.3269 5.0, 9.8 1.7
CC013/GeniUncJ f 5.3286 0.52509   7 0.19846 0.0985 4.7, 6.1 -0.65
CC013/GeniUncJ m 5.4667 0.89629   3 0.51747 0.164 4.9, 6.5 -0.56
CC017/UncJ f 6.44 0.76026   5 0.34 0.1181 5.7, 7.5 0.33
CC017/UncJ m 5.76 0.74364   5 0.33257 0.1291 5.1, 7.0 -0.3
CC018/UncJ f 6.8143 1.6708   7 0.63149 0.2452 4.2, 8.7 0.66
CC018/UncJ m 8.425 2.7464   4 1.3732 0.326 6.5, 12.5 2.08
CC019/TauUncJ f 6.2833 0.90866   6 0.37096 0.1446 5.4, 7.8 0.19
CC019/TauUncJ m 6.0571 1.0293   7 0.38905 0.1699 4.2, 7.0 -0.03
CC024/GeniUncJ f 5.3333 1.4473   6 0.59086 0.2714 3.0, 7.0 -0.65
CC024/GeniUncJ m 4.4857 0.77121   7 0.29149 0.1719 3.4, 5.5 -1.43
CC025/GeniUncJ f 5.3 0.73937   4 0.36968 0.1395 4.2, 5.8 -0.67
CC025/GeniUncJ m 6.05 1.1432   6 0.46673 0.189 4.8, 7.4 -0.04
CC026/GeniUncJ f 5.5286 0.83609   7 0.31601 0.1512 4.2, 6.6 -0.47
CC026/GeniUncJ m 5.7286 0.64476   7 0.2437 0.1126 4.9, 6.7 -0.32
CC032/GeniUncJ f 6.0167 1.0534   6 0.43005 0.1751 4.7, 7.3 -0.05
CC032/GeniUncJ m 7.3 0.502   6 0.20494 0.0688 6.6, 7.9 1.08
CC040/TauUncJ f 6.5857 1.1838   7 0.44744 0.1798 4.8, 7.9 0.45
CC040/TauUncJ m 5.925 0.41932   4 0.20966 0.0708 5.5, 6.5 -0.15
CC041/TauUncJ f 6.9857 3.1966   7 1.2082 0.4576 4.0, 11.9 0.81
CC041/TauUncJ m 5.75 1.0071   8 0.35607 0.1752 4.2, 6.7 -0.3
CC051/TauUncJ f 4.7125 1.4466   8 0.51145 0.307 3.4, 7.5 -1.19
CC051/TauUncJ m 4.6167 0.9196   6 0.37543 0.1992 3.8, 6.3 -1.32
CC068/TauUncJ f 5.26 0.56833   5 0.25417 0.108 4.7, 6.2 -0.71
CC068/TauUncJ m 5.7667 1.6503   3 0.95277 0.2862 4.1, 7.4 -0.29


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
CC002/UncJ f 4.4714 0.4584 5.3766 3.5662
CC002/UncJ m 5.44 0.5424 6.5111 4.3689
CC003/UncJ f 7.78 0.5424 8.8511 6.7089
CC003/UncJ m 6.975 0.6065 8.1725 5.7775
CC004/TauUncJ f 5.4 0.4584 6.3052 4.4948
CC004/TauUncJ m 5.3 0.4952 6.2778 4.3222
CC006/TauUncJ f 4.8 0.8577 6.4935 3.1065
CC006/TauUncJ m 6.0286 0.4584 6.9338 5.1234
CC009/UncJ f 8.1833 0.4952 9.1611 7.2056
CC009/UncJ m 8.475 0.4288 9.3218 7.6282
CC013/GeniUncJ f 5.3286 0.4584 6.2338 4.4234
CC013/GeniUncJ m 5.4667 0.7003 6.8494 4.0839
CC017/UncJ f 6.44 0.5424 7.5111 5.3689
CC017/UncJ m 5.76 0.5424 6.8311 4.6889
CC018/UncJ f 6.8143 0.4584 7.7195 5.9091
CC018/UncJ m 8.425 0.6065 9.6225 7.2275
CC019/TauUncJ f 6.2833 0.4952 7.2611 5.3056
CC019/TauUncJ m 6.0571 0.4584 6.9624 5.1519
CC024/GeniUncJ f 5.3333 0.4952 6.3111 4.3556
CC024/GeniUncJ m 4.4857 0.4584 5.3909 3.5805
CC025/GeniUncJ f 5.3 0.6065 6.4975 4.1025
CC025/GeniUncJ m 6.05 0.4952 7.0278 5.0722
CC026/GeniUncJ f 5.5286 0.4584 6.4338 4.6234
CC026/GeniUncJ m 5.7286 0.4584 6.6338 4.8234
CC032/GeniUncJ f 6.0167 0.4952 6.9944 5.0389
CC032/GeniUncJ m 7.3 0.4952 8.2778 6.3222
CC040/TauUncJ f 6.5857 0.4584 7.4909 5.6805
CC040/TauUncJ m 5.925 0.6065 7.1225 4.7275
CC041/TauUncJ f 6.9857 0.4584 7.8909 6.0805
CC041/TauUncJ m 5.75 0.4288 6.5968 4.9032
CC051/TauUncJ f 4.7125 0.4288 5.5593 3.8657
CC051/TauUncJ m 4.6167 0.4952 5.5944 3.6389
CC068/TauUncJ f 5.26 0.5424 6.3311 4.1889
CC068/TauUncJ m 5.7667 0.7003 7.1494 4.3839


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
CC002/UncJ both 4.9557 0.3551 5.6569 4.2545
CC003/UncJ both 7.3775 0.4068 8.1808 6.5742
CC004/TauUncJ both 5.35 0.3374 6.0162 4.6838
CC006/TauUncJ both 5.4143 0.4863 6.3744 4.4542
CC009/UncJ both 8.3292 0.3275 8.9759 7.6824
CC013/GeniUncJ both 5.3976 0.4185 6.224 4.5713
CC017/UncJ both 6.1 0.3836 6.8574 5.3426
CC018/UncJ both 7.6196 0.3801 8.3702 6.8691
CC019/TauUncJ both 6.1702 0.3374 6.8365 5.504
CC024/GeniUncJ both 4.9095 0.3374 5.5757 4.2433
CC025/GeniUncJ both 5.675 0.3915 6.448 4.902
CC026/GeniUncJ both 5.6286 0.3242 6.2687 4.9885
CC032/GeniUncJ both 6.6583 0.3501 7.3497 5.967
CC040/TauUncJ both 6.2554 0.3801 7.0059 5.5048
CC041/TauUncJ both 6.3679 0.3139 6.9876 5.7481
CC051/TauUncJ both 4.6646 0.3275 5.3113 4.0179
CC068/TauUncJ both 5.5133 0.4429 6.3879 4.6388




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA