Project measure / variable:   JaxCC1   chloride

ID, description, units MPD:89181   chloride   chloride (plasma Cl)   [mmol/L]  
Data set, strains JaxCC1   CC   18 strains     sex: both     age: 17-19wks
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  STRAIN COMPARISON PLOT
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JaxCC1 - chloride (plasma Cl)



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested18 strains17 strains
Mean of the strain means113.3   mmol/L 112.0   mmol/L
Median of the strain means113.6   mmol/L 112.8   mmol/L
SD of the strain means± 1.894 ± 2.0762
Coefficient of variation (CV)0.0167 0.0185
Min–max range of strain means110.4   –   116.6   mmol/L 109.2   –   115.2   mmol/L
Mean sample size per strain6.1   mice 6.2   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 72.6298 72.6298 21.1637 < 0.0001
strain 16 719.9053 44.9941 13.1109 < 0.0001
sex:strain 16 68.6724 4.292 1.2507 0.2344
Residuals 176 603.9987 3.4318


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
CC002/UncJ f 115.4 2.574   8 0.91005 0.0223 111.1, 119.3 1.09
CC002/UncJ m 115.2 0.66758   6 0.27254 0.0058 114.4, 115.9 1.55
CC003/UncJ f 111.6 1.3304   5 0.59498 0.0119 110.0, 112.7 -0.92
CC003/UncJ m 109.4 1.2842   4 0.6421 0.0117 108.1, 111.1 -1.24
CC004/TauUncJ f 116.6 1.6898   8 0.59745 0.0145 113.3, 118.2 1.72
CC004/TauUncJ m 112.8 1.7734   8 0.627 0.0157 109.4, 115.2 0.4
CC006/TauUncJ f 113.0 1.8824   3 1.0868 0.0167 111.8, 115.2 -0.18
CC006/TauUncJ m 109.9 2.195   7 0.82964 0.02 105.7, 112.4 -1.0
CC009/UncJ f 112.4 1.9603   6 0.80028 0.0174 110.2, 115.4 -0.5
CC009/UncJ m 110.0 2.1003   8 0.74258 0.0191 107.5, 112.6 -0.95
CC010/GeniUncJ f 115.5 0.85049   4 0.42525 0.0074 114.3, 116.2 1.14
CC013/GeniUncJ f 114.7 1.7662   7 0.66757 0.0154 112.4, 118.1 0.72
CC013/GeniUncJ m 113.9 3.4641   3 2.0 0.0304 109.9, 115.9 0.93
CC017/UncJ f 114.8 1.1781   5 0.52688 0.0103 113.2, 115.9 0.77
CC017/UncJ m 113.9 0.32094   5 0.14353 0.0028 113.6, 114.3 0.93
CC018/UncJ f 110.6 2.1158   7 0.7997 0.0191 107.3, 112.6 -1.45
CC018/UncJ m 109.6 3.0911   5 1.3824 0.0282 105.2, 112.4 -1.14
CC019/TauUncJ f 111.6 1.4922   6 0.60919 0.0134 109.9, 113.2 -0.92
CC019/TauUncJ m 110.4 1.7302   8 0.61172 0.0157 108.3, 113.1 -0.76
CC024/GeniUncJ f 113.2 1.3653   6 0.55737 0.0121 111.8, 115.1 -0.08
CC024/GeniUncJ m 113.6 2.0114   7 0.76024 0.0177 110.6, 116.5 0.78
CC025/GeniUncJ f 114.2 2.4556   4 1.2278 0.0215 110.8, 116.7 0.45
CC025/GeniUncJ m 114.2 1.8424   10 0.58261 0.0161 112.1, 118.3 1.07
CC026/GeniUncJ f 114.0 2.1259   7 0.80352 0.0187 109.9, 116.2 0.35
CC026/GeniUncJ m 113.5 1.6965   7 0.64121 0.0149 110.6, 116.1 0.73
CC032/GeniUncJ f 114.0 1.2922   6 0.52752 0.0113 112.5, 116.3 0.35
CC032/GeniUncJ m 112.9 1.4222   6 0.58061 0.0126 110.8, 115.1 0.44
CC040/TauUncJ f 111.2 1.506   7 0.56922 0.0135 108.8, 113.4 -1.13
CC040/TauUncJ m 109.6 1.0595   4 0.52974 0.0097 108.9, 111.2 -1.14
CC041/TauUncJ f 111.5 2.0603   7 0.77871 0.0185 109.1, 114.8 -0.97
CC041/TauUncJ m 111.7 1.5107   8 0.5341 0.0135 109.5, 113.3 -0.13
CC051/TauUncJ f 110.4 0.93465   8 0.33045 0.0085 109.3, 112.2 -1.55
CC051/TauUncJ m 109.2 1.9135   6 0.7812 0.0175 106.1, 110.9 -1.34
CC068/TauUncJ f 115.5 1.5209   5 0.68015 0.0132 113.5, 117.4 1.14
CC068/TauUncJ m 113.8 4.0154   3 2.3183 0.0353 109.2, 116.3 0.88


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
CC002/UncJ f 115.3625 0.655 116.6551 114.0699
CC002/UncJ m 115.1833 0.7563 116.6759 113.6908
CC003/UncJ f 111.6 0.8285 113.235 109.965
CC003/UncJ m 109.375 0.9263 111.203 107.547
CC004/TauUncJ f 116.5875 0.655 117.8801 115.2949
CC004/TauUncJ m 112.825 0.655 114.1176 111.5324
CC006/TauUncJ f 113.0333 1.0695 115.1441 110.9225
CC006/TauUncJ m 109.9143 0.7002 111.2961 108.5324
CC009/UncJ f 112.4333 0.7563 113.9259 110.9408
CC009/UncJ m 110.0 0.655 111.2926 108.7074
CC013/GeniUncJ f 114.6571 0.7002 116.039 113.2753
CC013/GeniUncJ m 113.9 1.0695 116.0108 111.7892
CC017/UncJ f 114.84 0.8285 116.475 113.205
CC017/UncJ m 113.94 0.8285 115.575 112.305
CC018/UncJ f 110.6 0.7002 111.9818 109.2182
CC018/UncJ m 109.6 0.8285 111.235 107.965
CC019/TauUncJ f 111.5667 0.7563 113.0592 110.0741
CC019/TauUncJ m 110.375 0.655 111.6676 109.0824
CC024/GeniUncJ f 113.2 0.7563 114.6926 111.7074
CC024/GeniUncJ m 113.5714 0.7002 114.9533 112.1896
CC025/GeniUncJ f 114.15 0.9263 115.978 112.322
CC025/GeniUncJ m 114.19 0.5858 115.3461 113.0339
CC026/GeniUncJ f 113.9571 0.7002 115.339 112.5753
CC026/GeniUncJ m 113.5143 0.7002 114.8961 112.1324
CC032/GeniUncJ f 114.0167 0.7563 115.5092 112.5241
CC032/GeniUncJ m 112.8667 0.7563 114.3592 111.3741
CC040/TauUncJ f 111.1857 0.7002 112.5676 109.8039
CC040/TauUncJ m 109.625 0.9263 111.453 107.797
CC041/TauUncJ f 111.4857 0.7002 112.8676 110.1039
CC041/TauUncJ m 111.725 0.655 113.0176 110.4324
CC051/TauUncJ f 110.375 0.655 111.6676 109.0824
CC051/TauUncJ m 109.2167 0.7563 110.7092 107.7241
CC068/TauUncJ f 115.46 0.8285 117.095 113.825
CC068/TauUncJ m 113.8333 1.0695 115.9441 111.7225


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
CC002/UncJ both 115.2729 0.5002 116.2601 114.2857
CC003/UncJ both 110.4875 0.6214 111.7138 109.2612
CC004/TauUncJ both 114.7062 0.4631 115.6203 113.7922
CC006/TauUncJ both 111.4738 0.6392 112.7352 110.2124
CC009/UncJ both 111.2167 0.5002 112.2039 110.2294
CC013/GeniUncJ both 114.2786 0.6392 115.54 113.0171
CC017/UncJ both 114.39 0.5858 115.5461 113.2339
CC018/UncJ both 110.1 0.5424 111.1704 109.0296
CC019/TauUncJ both 110.9708 0.5002 111.9581 109.9836
CC024/GeniUncJ both 113.3857 0.5153 114.4027 112.3687
CC025/GeniUncJ both 114.17 0.548 115.2515 113.0885
CC026/GeniUncJ both 113.7357 0.4951 114.7128 112.7586
CC032/GeniUncJ both 113.4417 0.5348 114.4971 112.3863
CC040/TauUncJ both 110.4054 0.5806 111.5511 109.2596
CC041/TauUncJ both 111.6054 0.4794 112.5514 110.6593
CC051/TauUncJ both 109.7958 0.5002 110.7831 108.8086
CC068/TauUncJ both 114.6467 0.6764 115.9816 113.3117




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA