Phenotype measure:   JaxCC1   body_length

ID, description, units MPD:89174   body_length   body length   [cm]
Data set, strains JaxCC1   CC   18 strains     sex: both     age: 13-15wks
Procedure body size and weight
Ontology mappings

  STRAIN COMPARISON PLOT
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JaxCC1 - body length



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested18 strains17 strains
Mean of the strain means8.1549   cm 8.444   cm
Median of the strain means8.1212   cm 8.4   cm
SD of the strain means± 0.38226 ± 0.36628
Coefficient of variation (CV)0.0469 0.0434
Min–max range of strain means7.4286   –   8.86   cm 7.6375   –   9.0375   cm
Mean sample size per strain6.8   mice 7.3   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 3.6369 3.6369 72.6503 < 0.0001
strain 16 29.6646 1.854 37.036 < 0.0001
sex:strain 16 1.9441 0.1215 2.4271 0.0023
Residuals 208 10.4125 0.0501


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
Strain Sex Mean SD N mice SEM CV Min, Max Z score
CC002/UncJ f 7.9875 0.22321   8 0.07892 0.0279 7.6, 8.3 -0.44
CC002/UncJ m 8.1286 0.33523   7 0.12671 0.0412 7.7, 8.8 -0.86
CC003/UncJ f 8.86 0.19494   5 0.08718 0.022 8.7, 9.2 1.84
CC003/UncJ m 8.8 0.08165   4 0.04082 0.0093 8.7, 8.9 0.97
CC004/TauUncJ f 8.1625 0.25036   8 0.08851 0.0307 7.7, 8.5 0.02
CC004/TauUncJ m 8.2375 0.1598   8 0.0565 0.0194 8.0, 8.4 -0.56
CC006/TauUncJ f 8.275 0.20616   4 0.10308 0.0249 8.1, 8.5 0.31
CC006/TauUncJ m 8.3125 0.21671   8 0.07662 0.0261 8.0, 8.7 -0.36
CC009/UncJ f 8.4625 0.19226   8 0.06797 0.0227 8.1, 8.7 0.8
CC009/UncJ m 9.0375 0.13025   8 0.04605 0.0144 8.8, 9.2 1.62
CC010/GeniUncJ f 7.76 0.08944   5 0.04 0.0115 7.6, 7.8 -1.03
CC013/GeniUncJ f 8.0 0.27255   8 0.09636 0.0341 7.7, 8.5 -0.41
CC013/GeniUncJ m 8.625 0.22174   4 0.11087 0.0257 8.3, 8.8 0.49
CC017/UncJ f 7.7333 0.28048   6 0.1145 0.0363 7.3, 8.0 -1.1
CC017/UncJ m 8.16 0.11402   5 0.05099 0.014 8.0, 8.3 -0.78
CC018/UncJ f 8.2714 0.22887   7 0.0865 0.0277 7.9, 8.6 0.3
CC018/UncJ m 8.7429 0.12724   7 0.04809 0.0146 8.5, 8.9 0.82
CC019/TauUncJ f 7.4286 0.33523   7 0.12671 0.0451 6.8, 7.8 -1.9
CC019/TauUncJ m 7.6375 0.17678   8 0.0625 0.0231 7.4, 7.9 -2.2
CC024/GeniUncJ f 8.6429 0.23705   7 0.08959 0.0274 8.3, 8.8 1.28
CC024/GeniUncJ m 8.925 0.23146   8 0.08183 0.0259 8.5, 9.1 1.31
CC025/GeniUncJ f 7.7 0.30822   5 0.13784 0.04 7.3, 8.0 -1.19
CC025/GeniUncJ m 8.04 0.22211   10 0.07024 0.0276 7.5, 8.3 -1.1
CC026/GeniUncJ f 8.025 0.23146   8 0.08183 0.0288 7.5, 8.2 -0.34
CC026/GeniUncJ m 8.4 0.09258   8 0.03273 0.011 8.3, 8.5 -0.12
CC032/GeniUncJ f 7.925 0.29641   8 0.1048 0.0374 7.4, 8.2 -0.6
CC032/GeniUncJ m 8.3125 0.33139   8 0.11717 0.0399 7.8, 8.7 -0.36
CC040/TauUncJ f 8.5 0.22039   8 0.07792 0.0259 8.1, 8.7 0.9
CC040/TauUncJ m 8.5143 0.21157   7 0.07997 0.0248 8.3, 8.8 0.19
CC041/TauUncJ f 8.7 0.18516   8 0.06547 0.0213 8.4, 8.9 1.43
CC041/TauUncJ m 8.8875 0.0991   8 0.03504 0.0112 8.8, 9.0 1.21
CC051/TauUncJ f 8.275 0.18323   8 0.06478 0.0221 8.0, 8.5 0.31
CC051/TauUncJ m 8.525 0.1488   8 0.05261 0.0175 8.4, 8.7 0.22
CC068/TauUncJ f 8.08 0.26833   5 0.12 0.0332 7.8, 8.4 -0.2
CC068/TauUncJ m 8.2625 0.23867   8 0.08438 0.0289 8.0, 8.7 -0.5


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
CC002/UncJ f 7.9875 0.0791 8.1434 7.8316
CC002/UncJ m 8.1286 0.0846 8.2953 7.9619
CC003/UncJ f 8.86 0.1001 9.0573 8.6627
CC003/UncJ m 8.8 0.1119 9.0205 8.5795
CC004/TauUncJ f 8.1625 0.0791 8.3184 8.0066
CC004/TauUncJ m 8.2375 0.0791 8.3934 8.0816
CC006/TauUncJ f 8.275 0.1119 8.4955 8.0545
CC006/TauUncJ m 8.3125 0.0791 8.4684 8.1566
CC009/UncJ f 8.4625 0.0791 8.6184 8.3066
CC009/UncJ m 9.0375 0.0791 9.1934 8.8816
CC013/GeniUncJ f 8.0 0.0791 8.1559 7.8441
CC013/GeniUncJ m 8.625 0.1119 8.8455 8.4045
CC017/UncJ f 7.7333 0.0913 7.9134 7.5533
CC017/UncJ m 8.16 0.1001 8.3573 7.9627
CC018/UncJ f 8.2714 0.0846 8.4381 8.1047
CC018/UncJ m 8.7429 0.0846 8.9096 8.5761
CC019/TauUncJ f 7.4286 0.0846 7.5953 7.2619
CC019/TauUncJ m 7.6375 0.0791 7.7934 7.4816
CC024/GeniUncJ f 8.6429 0.0846 8.8096 8.4761
CC024/GeniUncJ m 8.925 0.0791 9.0809 8.7691
CC025/GeniUncJ f 7.7 0.1001 7.8973 7.5027
CC025/GeniUncJ m 8.04 0.0708 8.1795 7.9005
CC026/GeniUncJ f 8.025 0.0791 8.1809 7.8691
CC026/GeniUncJ m 8.4 0.0791 8.5559 8.2441
CC032/GeniUncJ f 7.925 0.0791 8.0809 7.7691
CC032/GeniUncJ m 8.3125 0.0791 8.4684 8.1566
CC040/TauUncJ f 8.5 0.0791 8.6559 8.3441
CC040/TauUncJ m 8.5143 0.0846 8.681 8.3476
CC041/TauUncJ f 8.7 0.0791 8.8559 8.5441
CC041/TauUncJ m 8.8875 0.0791 9.0434 8.7316
CC051/TauUncJ f 8.275 0.0791 8.4309 8.1191
CC051/TauUncJ m 8.525 0.0791 8.6809 8.3691
CC068/TauUncJ f 8.08 0.1001 8.2773 7.8827
CC068/TauUncJ m 8.2625 0.0791 8.4184 8.1066


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
CC002/UncJ both 8.058 0.0579 8.1722 7.9439
CC003/UncJ both 8.83 0.075 8.9779 8.6821
CC004/TauUncJ both 8.2 0.0559 8.3103 8.0897
CC006/TauUncJ both 8.2937 0.0685 8.4288 8.1587
CC009/UncJ both 8.75 0.0559 8.8603 8.6397
CC013/GeniUncJ both 8.3125 0.0685 8.4476 8.1774
CC017/UncJ both 7.9467 0.0677 8.0802 7.8131
CC018/UncJ both 8.5071 0.0598 8.625 8.3893
CC019/TauUncJ both 7.533 0.0579 7.6472 7.4189
CC024/GeniUncJ both 8.7839 0.0579 8.8981 8.6698
CC025/GeniUncJ both 7.87 0.0613 7.9908 7.7492
CC026/GeniUncJ both 8.2125 0.0559 8.3228 8.1022
CC032/GeniUncJ both 8.1187 0.0559 8.229 8.0085
CC040/TauUncJ both 8.5071 0.0579 8.6213 8.393
CC041/TauUncJ both 8.7937 0.0559 8.904 8.6835
CC051/TauUncJ both 8.4 0.0559 8.5103 8.2897
CC068/TauUncJ both 8.1712 0.0638 8.297 8.0455




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA