Project measure / variable:   JaxCC1   immob_duration_TS

ID, description, units MPD:89135   immob_duration_TS   duration of immobility, 5 min test   [s]  
Data set, strains JaxCC1   CC   14 strains     sex: both     age: 10-12wks
Procedure tail suspension test
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  STRAIN COMPARISON PLOT
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JaxCC1 - duration of immobility, 5 min test



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested13 strains12 strains
Mean of the strain means138.9   s 141.9   s
Median of the strain means158.8   s 159.8   s
SD of the strain means± 50.94 ± 64.81
Coefficient of variation (CV)0.3667 0.4568
Min–max range of strain means68.2   –   197.7   s 32.565   –   217.8   s
Mean sample size per strain7.2   mice 6.8   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 611.1807 611.1807 0.5361 0.4653
strain 10 501762.9336 50176.2934 44.0111 < 0.0001
sex:strain 10 13822.0083 1382.2008 1.2124 0.2882
Residuals 138 157331.2575 1140.0816


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
CC002/UncJ f 193.6 22.893   8 8.094 0.1183 168.1, 237.1 1.07
CC002/UncJ m 215.2 13.912   7 5.2582 0.0647 192.0, 235.4 1.13
CC004/TauUncJ m 140.5 9.75   4 4.875 0.0694 131.6, 153.2 -0.02
CC006/TauUncJ f 173.3 11.337   4 5.6685 0.0654 161.3, 187.6 0.67
CC006/TauUncJ m 169.1 19.649   8 6.9469 0.1162 139.4, 194.8 0.42
CC009/UncJ f 73.51 30.843   8 10.905 0.4196 20.12, 117.9 -1.28
CC009/UncJ m 32.565 14.16   4 7.0801 0.4348 13.246, 46.479 -1.69
CC010/GeniUncJ f 79.32 18.037   5 8.0662 0.2274 48.447, 95.69 -1.17
CC013/GeniUncJ f 125.3 10.747   5 4.8064 0.0858 111.8, 140.0 -0.27
CC018/UncJ f 180.4 43.993   8 15.554 0.2438 123.6, 244.0 0.81
CC018/UncJ m 174.1 32.364   8 11.442 0.1859 121.7, 209.8 0.5
CC019/TauUncJ f 68.2 26.3   8 9.2983 0.3856 30.764, 100.5 -1.39
CC019/TauUncJ m 54.1 33.11   8 11.706 0.612 15.615, 97.93 -1.35
CC024/GeniUncJ f 126.1 55.47   7 20.965 0.4398 46.412, 187.0 -0.25
CC024/GeniUncJ m 105.9 37.362   3 21.571 0.3529 83.21, 149.0 -0.56
CC026/GeniUncJ f 158.8 20.013   8 7.0756 0.126 129.1, 189.3 0.39
CC026/GeniUncJ m 150.4 38.013   8 13.44 0.2528 113.3, 213.6 0.13
CC032/GeniUncJ f 191.9 22.211   8 7.8528 0.1157 154.7, 225.8 1.04
CC032/GeniUncJ m 188.9 65.15   8 23.034 0.3449 32.999, 237.1 0.73
CC040/TauUncJ f 166.9 16.503   8 5.8346 0.0989 135.6, 190.9 0.55
CC040/TauUncJ m 196.4 29.57   7 11.176 0.1505 158.1, 242.2 0.84
CC041/TauUncJ f 197.7 58.37   8 20.635 0.2952 63.4, 246.5 1.15
CC041/TauUncJ m 217.8 18.035   8 6.3763 0.0828 195.9, 245.2 1.17
CC051/TauUncJ f 70.9 22.774   8 8.0517 0.3212 25.325, 98.56 -1.34
CC051/TauUncJ m 57.74 25.398   8 8.9794 0.4399 26.593, 93.59 -1.3


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
CC002/UncJ f 193.575 11.9378 217.1796 169.9704
CC002/UncJ m 215.1714 12.762 240.4058 189.9371
CC006/TauUncJ f 173.3 16.8825 206.6819 139.9181
CC006/TauUncJ m 169.0875 11.9378 192.6921 145.4829
CC009/UncJ f 73.5075 11.9378 97.1121 49.9029
CC009/UncJ m 32.5653 16.8825 65.9472 -0.8167
CC018/UncJ f 180.425 11.9378 204.0296 156.8204
CC018/UncJ m 174.1 11.9378 197.7046 150.4954
CC019/TauUncJ f 68.2036 11.9378 91.8082 44.599
CC019/TauUncJ m 54.0991 11.9378 77.7037 30.4945
CC024/GeniUncJ f 126.1103 12.762 151.3446 100.8759
CC024/GeniUncJ m 105.8767 19.4943 144.4228 67.3305
CC026/GeniUncJ f 158.8125 11.9378 182.4171 135.2079
CC026/GeniUncJ m 150.3625 11.9378 173.9671 126.7579
CC032/GeniUncJ f 191.9 11.9378 215.5046 168.2954
CC032/GeniUncJ m 188.9124 11.9378 212.517 165.3078
CC040/TauUncJ f 166.9375 11.9378 190.5421 143.3329
CC040/TauUncJ m 196.4429 12.762 221.6772 171.2085
CC041/TauUncJ f 197.725 11.9378 221.3296 174.1204
CC041/TauUncJ m 217.825 11.9378 241.4296 194.2204
CC051/TauUncJ f 70.9031 11.9378 94.5077 47.2985
CC051/TauUncJ m 57.7396 11.9378 81.3442 34.135


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
CC002/UncJ both 204.3732 8.7375 221.65 187.0964
CC006/TauUncJ both 171.1937 10.3384 191.6359 150.7516
CC009/UncJ both 53.0364 10.3384 73.4785 32.5942
CC018/UncJ both 177.2625 8.4413 193.9535 160.5715
CC019/TauUncJ both 61.1514 8.4413 77.8423 44.4604
CC024/GeniUncJ both 115.9935 11.6501 139.0292 92.9578
CC026/GeniUncJ both 154.5875 8.4413 171.2785 137.8965
CC032/GeniUncJ both 190.4062 8.4413 207.0971 173.7152
CC040/TauUncJ both 181.6902 8.7375 198.967 164.4134
CC041/TauUncJ both 207.775 8.4413 224.466 191.084
CC051/TauUncJ both 64.3214 8.4413 81.0123 47.6304




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA