Project measure / variable:   JaxCC1   immob_latency_TS

ID, description, units MPD:89134   immob_latency_TS   latency to immobility, 5 min test   [s]  
Data set, strains JaxCC1   CC   14 strains     sex: both     age: 10-12wks
Procedure tail suspension test
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  STRAIN COMPARISON PLOT
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JaxCC1 - latency to immobility, 5 min test



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested13 strains12 strains
Mean of the strain means65.05   s 78.26   s
Median of the strain means61.6   s 60.43   s
SD of the strain means± 26.915 ± 44.699
Coefficient of variation (CV)0.4137 0.5712
Min–max range of strain means24.75   –   120.4   s 33.875   –   187.9   s
Mean sample size per strain7.2   mice 6.8   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 2179.7044 2179.7044 1.2475 0.266
strain 10 192159.0461 19215.9046 10.9974 < 0.0001
sex:strain 10 27969.3659 2796.9366 1.6007 0.1124
Residuals 138 241129.5774 1747.3158


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
CC002/UncJ f 45.75 30.349   8 10.73 0.6634 20.0, 111.0 -0.72
CC002/UncJ m 56.86 8.2952   7 3.1353 0.1459 46.0, 69.0 -0.48
CC004/TauUncJ m 105.8 28.265   4 14.133 0.2673 84.0, 147.0 0.62
CC006/TauUncJ f 65.0 24.886   4 12.443 0.3829 42.0, 88.0 0.0
CC006/TauUncJ m 45.125 21.504   8 7.6027 0.4765 18.0, 80.0 -0.74
CC009/UncJ f 76.0 54.73   8 19.35 0.7201 24.0, 196.0 0.41
CC009/UncJ m 127.8 48.044   4 24.022 0.3761 76.0, 182.0 1.11
CC010/GeniUncJ f 61.6 25.442   5 11.378 0.413 31.0, 94.0 -0.13
CC013/GeniUncJ f 47.6 17.155   5 7.672 0.3604 25.0, 70.0 -0.65
CC018/UncJ f 75.0 37.493   8 13.256 0.4999 37.0, 146.0 0.37
CC018/UncJ m 64.0 31.834   8 11.255 0.4974 13.0, 109.0 -0.32
CC019/TauUncJ f 91.12 46.658   8 16.496 0.512 24.0, 140.0 0.97
CC019/TauUncJ m 71.62 50.11   8 17.715 0.6996 10.0, 176.0 -0.15
CC024/GeniUncJ f 45.571 25.909   7 9.7928 0.5685 20.0, 97.0 -0.72
CC024/GeniUncJ m 49.667 5.8595   3 3.383 0.118 43.0, 54.0 -0.64
CC026/GeniUncJ f 56.5 28.42   8 10.048 0.503 22.0, 98.0 -0.32
CC026/GeniUncJ m 44.875 19.773   8 6.9909 0.4406 10.0, 76.0 -0.75
CC032/GeniUncJ f 37.0 21.327   8 7.5404 0.5764 13.0, 65.0 -1.04
CC032/GeniUncJ m 53.12 19.511   8 6.8983 0.3673 13.0, 79.0 -0.56
CC040/TauUncJ f 99.38 46.043   8 16.279 0.4633 22.0, 187.0 1.28
CC040/TauUncJ m 98.43 71.71   7 27.104 0.7285 21.0, 186.0 0.45
CC041/TauUncJ f 24.75 9.6622   8 3.4161 0.3904 10.0, 34.0 -1.5
CC041/TauUncJ m 33.875 20.209   8 7.145 0.5966 15.0, 68.0 -0.99
CC051/TauUncJ f 120.4 91.24   8 32.26 0.758 30.0, 322.0 2.06
CC051/TauUncJ m 187.9 60.61   8 21.429 0.3226 119.0, 280.0 2.45


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
CC002/UncJ f 45.75 14.7789 74.9723 16.5277
CC002/UncJ m 56.8571 15.7993 88.0971 25.6172
CC006/TauUncJ f 65.0 20.9005 106.3265 23.6735
CC006/TauUncJ m 45.125 14.7789 74.3473 15.9027
CC009/UncJ f 76.0 14.7789 105.2223 46.7777
CC009/UncJ m 127.75 20.9005 169.0765 86.4235
CC018/UncJ f 75.0 14.7789 104.2223 45.7777
CC018/UncJ m 64.0 14.7789 93.2223 34.7777
CC019/TauUncJ f 91.125 14.7789 120.3473 61.9027
CC019/TauUncJ m 71.625 14.7789 100.8473 42.4027
CC024/GeniUncJ f 45.5714 15.7993 76.8114 14.3315
CC024/GeniUncJ m 49.6667 24.1338 97.3864 1.9469
CC026/GeniUncJ f 56.5 14.7789 85.7223 27.2777
CC026/GeniUncJ m 44.875 14.7789 74.0973 15.6527
CC032/GeniUncJ f 37.0 14.7789 66.2223 7.7777
CC032/GeniUncJ m 53.125 14.7789 82.3473 23.9027
CC040/TauUncJ f 99.375 14.7789 128.5973 70.1527
CC040/TauUncJ m 98.4286 15.7993 129.6685 67.1886
CC041/TauUncJ f 24.75 14.7789 53.9723 -4.4723
CC041/TauUncJ m 33.875 14.7789 63.0973 4.6527
CC051/TauUncJ f 120.375 14.7789 149.5973 91.1527
CC051/TauUncJ m 187.875 14.7789 217.0973 158.6527


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
CC002/UncJ both 51.3036 10.817 72.6921 29.9151
CC006/TauUncJ both 55.0625 12.7989 80.3697 29.7553
CC009/UncJ both 101.875 12.7989 127.1822 76.5678
CC018/UncJ both 69.5 10.4502 90.1633 48.8367
CC019/TauUncJ both 81.375 10.4502 102.0383 60.7117
CC024/GeniUncJ both 47.619 14.4227 76.1371 19.101
CC026/GeniUncJ both 50.6875 10.4502 71.3508 30.0242
CC032/GeniUncJ both 45.0625 10.4502 65.7258 24.3992
CC040/TauUncJ both 98.9018 10.817 120.2903 77.5133
CC041/TauUncJ both 29.3125 10.4502 49.9758 8.6492
CC051/TauUncJ both 154.125 10.4502 174.7883 133.4617




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA