Phenotype measure:   JaxCC1   pNN50

ID, description, units MPD:89128   pNN50   proportion of number of pairs of successive beat-to-beat intervals that exceed 50 ms (6>ms)   [%]
Data set, strains JaxCC1   CC   18 strains     sex: both     age: 10-12wks
Procedure ECG
Ontology mappings

  STRAIN COMPARISON PLOT
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JaxCC1 - proportion of number of pairs of successive beat-to-beat intervals that exceed 50 ms (6>ms)



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested16 strains17 strains
Mean of the strain means10.063   % 9.2751   %
Median of the strain means6.65   % 8.3975   %
SD of the strain means± 8.0104 ± 6.9322
Coefficient of variation (CV)0.7961 0.7474
Min–max range of strain means2.33   –   28.725   % 2.44   –   32.977   %
Mean sample size per strain2.0   mice 2.8   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 130.3575 130.3575 1.191 0.282
strain 9 721.426 80.1584 0.7323 0.6768
sex:strain 9 715.6297 79.5144 0.7265 0.6819
Residuals 38 4159.3088 109.4555


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
CC002/UncJ f 6.63 1.9375   2   1.37 0.2922 5.26, 8.0 -0.43
CC002/UncJ m 6.0267 6.5933   3 3.8067 1.094 2.22, 13.64 -0.47
CC003/UncJ f 18.3 24.673   3 14.245 1.3483 1.85, 46.67 1.03
CC003/UncJ m 17.41 15.783   2   11.16 0.9065 6.25, 28.57 1.17
CC004/TauUncJ f 28.725 24.911   2   17.615 0.8672 11.11, 46.34 2.33
CC004/TauUncJ m 8.756 3.4052   5 1.5228 0.3889 5.0, 13.95 -0.07
CC006/TauUncJ f 16.175 16.596   2   11.735 1.026 4.44, 27.91 0.76
CC006/TauUncJ m 8.3975 5.5322   4 2.7661 0.6588 5.26, 16.67 -0.13
CC009/UncJ f 3.77 0.0   1   0.0 0.0 3.77, 3.77 -0.79
CC009/UncJ m 5.88 0.0   1   0.0 0.0 5.88, 5.88 -0.49
CC010/GeniUncJ f 2.33 0.0   1   0.0 0.0 2.33, 2.33 -0.97
CC013/GeniUncJ f 2.595 0.0495   2   0.035 0.0191 2.56, 2.63 -0.93
CC013/GeniUncJ m 10.325 3.7265   2   2.635 0.3609 7.69, 12.96 0.15
CC017/UncJ f 10.275 10.789   4 5.3943 1.05 3.23, 26.32 0.03
CC017/UncJ m 8.43 8.8528   4 4.4264 1.0502 1.85, 20.83 -0.12
CC018/UncJ f 3.75 0.59397   2   0.42 0.1584 3.33, 4.17 -0.79
CC018/UncJ m 8.84 4.6386   2   3.28 0.5247 5.56, 12.12 -0.06
CC019/TauUncJ f 6.67 0.0   1   0.0 0.0 6.67, 6.67 -0.42
CC019/TauUncJ m 3.25 1.3011   2   0.92 0.4003 2.33, 4.17 -0.87
CC024/GeniUncJ f 5.695 6.0882   2   4.305 1.069 1.39, 10.0 -0.55
CC024/GeniUncJ m 8.685 10.268   4 5.1341 1.1823 2.04, 24.0 -0.09
CC025/GeniUncJ m 32.977 29.443   6 12.02 0.8928 5.41, 83.87 3.42
CC026/GeniUncJ f 17.38 20.421   2   14.44 1.175 2.94, 31.82 0.91
CC026/GeniUncJ m 9.73 5.3581   5 2.3962 0.5507 2.56, 15.38 0.07
CC032/GeniUncJ f 21.43 0.0   1   0.0 0.0 21.43, 21.43 1.42
CC032/GeniUncJ m 5.71 0.0   1   0.0 0.0 5.71, 5.71 -0.51
CC040/TauUncJ f 4.65 0.0   1   0.0 0.0 4.65, 4.65 -0.68
CC040/TauUncJ m 5.88 0.0   1   0.0 0.0 5.88, 5.88 -0.49
CC041/TauUncJ m 8.33 0.0   1   0.0 0.0 8.33, 8.33 -0.14
CC051/TauUncJ f 10.277 2.4659   3 1.4237 0.24 8.11, 12.96 0.03
CC051/TauUncJ m 6.61 5.0165   3 2.8963 0.7589 2.5, 12.2 -0.38
CC068/TauUncJ f 2.35 0.44576   3 0.25736 0.1897 1.89, 2.78 -0.96
CC068/TauUncJ m 2.44 0.0   1   0.0 0.0 2.44, 2.44 -0.99


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
CC002/UncJ f 6.63 7.3978 21.6061 -8.3461
CC002/UncJ m 6.0267 6.0403 18.2546 -6.2013
CC003/UncJ f 18.3 6.0403 30.5279 6.0721
CC003/UncJ m 17.41 7.3978 32.3861 2.4339
CC004/TauUncJ f 28.725 7.3978 43.7011 13.7489
CC004/TauUncJ m 8.756 4.6788 18.2277 -0.7157
CC006/TauUncJ f 16.175 7.3978 31.1511 1.1989
CC006/TauUncJ m 8.3975 5.231 18.9872 -2.1922
CC013/GeniUncJ f 2.595 7.3978 17.5711 -12.3811
CC013/GeniUncJ m 10.325 7.3978 25.3011 -4.6511
CC017/UncJ f 10.275 5.231 20.8647 -0.3147
CC017/UncJ m 8.43 5.231 19.0197 -2.1597
CC018/UncJ f 3.75 7.3978 18.7261 -11.2261
CC018/UncJ m 8.84 7.3978 23.8161 -6.1361
CC024/GeniUncJ f 5.695 7.3978 20.6711 -9.2811
CC024/GeniUncJ m 8.685 5.231 19.2747 -1.9047
CC026/GeniUncJ f 17.38 7.3978 32.3561 2.4039
CC026/GeniUncJ m 9.73 4.6788 19.2017 0.2583
CC051/TauUncJ f 10.2767 6.0403 22.5046 -1.9513
CC051/TauUncJ m 6.61 6.0403 18.8379 -5.6179


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
CC002/UncJ both 6.3283 4.7753 15.9954 -3.3387
CC003/UncJ both 17.855 4.7753 27.522 8.188
CC004/TauUncJ both 18.7405 4.3766 27.6005 9.8805
CC006/TauUncJ both 12.2863 4.5302 21.4572 3.1153
CC013/GeniUncJ both 6.46 5.231 17.0497 -4.1297
CC017/UncJ both 9.3525 3.6989 16.8406 1.8644
CC018/UncJ both 6.295 5.231 16.8847 -4.2947
CC024/GeniUncJ both 7.19 4.5302 16.361 -1.981
CC026/GeniUncJ both 13.555 4.3766 22.415 4.695
CC051/TauUncJ both 8.4433 4.2711 17.0898 -0.2031




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA