Phenotype measure:   JaxCC1   ST

ID, description, units MPD:89121   ST   duration of ST interval   [ms]
Data set, strains JaxCC1   CC   18 strains     sex: both     age: 10-12wks
Procedure ECG
Ontology mappings

  STRAIN COMPARISON PLOT
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JaxCC1 - duration of ST interval



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested18 strains17 strains
Mean of the strain means28.598   ms 28.987   ms
Median of the strain means28.718   ms 29.075   ms
SD of the strain means± 1.1589 ± 1.335
Coefficient of variation (CV)0.0405 0.0461
Min–max range of strain means26.571   –   30.838   ms 25.812   –   31.412   ms
Mean sample size per strain6.5   mice 7.2   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 8.9594 8.9594 2.1127 0.1476
strain 16 312.6875 19.543 4.6084 < 0.0001
sex:strain 16 62.1486 3.8843 0.9159 0.5518
Residuals 201 852.3856 4.2407


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
Strain Sex Mean SD N mice SEM CV Min, Max Z score
CC002/UncJ f 27.675 2.1252   8 0.75137 0.0768 24.9, 31.1 -0.8
CC002/UncJ m 27.214 1.8022   7 0.68119 0.0662 23.4, 28.6 -1.33
CC003/UncJ f 29.2 1.0416   5 0.46583 0.0357 28.4, 31.0 0.52
CC003/UncJ m 29.075 1.5966   4 0.79831 0.0549 27.1, 30.9 0.07
CC004/TauUncJ f 28.92 2.3231   5 1.0389 0.0803 26.2, 31.3 0.28
CC004/TauUncJ m 28.25 2.3964   8 0.84726 0.0848 24.3, 32.8 -0.55
CC006/TauUncJ f 29.225 3.3669   4 1.6834 0.1152 26.8, 34.2 0.54
CC006/TauUncJ m 29.163 1.4706   8 0.51994 0.0504 26.9, 30.9 0.13
CC009/UncJ f 30.838 0.98407   8 0.34792 0.0319 29.3, 32.0 1.93
CC009/UncJ m 31.075 1.2372   8 0.43742 0.0398 29.2, 32.4 1.56
CC010/GeniUncJ f 29.62 1.4061   5 0.62881 0.0475 28.2, 31.2 0.88
CC013/GeniUncJ f 29.125 1.505   8 0.53209 0.0517 27.3, 32.2 0.45
CC013/GeniUncJ m 30.1 1.2124   3 0.7 0.0403 28.8, 31.2 0.83
CC017/UncJ f 28.58 3.1823   5 1.4232 0.1113 24.9, 32.8 -0.02
CC017/UncJ m 29.55 1.1269   4 0.56347 0.0381 28.7, 31.2 0.42
CC018/UncJ f 28.857 1.5285   7 0.5777 0.053 26.5, 31.1 0.22
CC018/UncJ m 29.475 2.1704   8 0.76736 0.0736 27.3, 33.7 0.37
CC019/TauUncJ f 27.887 3.3774   8 1.1941 0.1211 22.3, 33.0 -0.61
CC019/TauUncJ m 25.812 3.1133   8 1.1007 0.1206 21.4, 30.0 -2.38
CC024/GeniUncJ f 30.586 1.8578   7 0.70218 0.0607 28.0, 33.2 1.72
CC024/GeniUncJ m 31.412 1.5487   8 0.54754 0.0493 29.6, 33.9 1.82
CC025/GeniUncJ f 28.26 1.4153   5 0.63293 0.0501 27.1, 30.6 -0.29
CC025/GeniUncJ m 28.41 3.0201   10 0.95504 0.1063 23.7, 33.4 -0.43
CC026/GeniUncJ f 27.171 1.7774   7 0.67178 0.0654 24.8, 30.1 -1.23
CC026/GeniUncJ m 29.288 2.1444   8 0.75816 0.0732 26.1, 32.7 0.23
CC032/GeniUncJ f 26.571 1.5724   7 0.5943 0.0592 23.8, 28.4 -1.75
CC032/GeniUncJ m 28.914 1.6817   7 0.63562 0.0582 26.3, 31.2 -0.05
CC040/TauUncJ f 28.0 2.3857   8 0.84346 0.0852 25.0, 32.2 -0.52
CC040/TauUncJ m 28.886 2.309   7 0.87272 0.0799 25.5, 32.3 -0.08
CC041/TauUncJ f 29.3 1.399   8 0.49461 0.0477 26.7, 30.9 0.61
CC041/TauUncJ m 29.875 1.7194   8 0.60791 0.0576 27.0, 32.6 0.67
CC051/TauUncJ f 26.914 1.9265   7 0.72815 0.0716 23.9, 30.4 -1.45
CC051/TauUncJ m 28.078 2.2004   9 0.73348 0.0784 24.1, 30.9 -0.68
CC068/TauUncJ f 28.04 0.87063   5 0.38936 0.031 26.7, 28.9 -0.48
CC068/TauUncJ m 28.2 1.7833   8 0.63048 0.0632 25.1, 30.7 -0.59


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
CC002/UncJ f 27.675 0.7281 29.1106 26.2394
CC002/UncJ m 27.2143 0.7783 28.7491 25.6795
CC003/UncJ f 29.2 0.9209 31.016 27.384
CC003/UncJ m 29.075 1.0297 31.1053 27.0447
CC004/TauUncJ f 28.92 0.9209 30.736 27.104
CC004/TauUncJ m 28.25 0.7281 29.6856 26.8144
CC006/TauUncJ f 29.225 1.0297 31.2553 27.1947
CC006/TauUncJ m 29.1625 0.7281 30.5981 27.7269
CC009/UncJ f 30.8375 0.7281 32.2731 29.4019
CC009/UncJ m 31.075 0.7281 32.5106 29.6394
CC013/GeniUncJ f 29.125 0.7281 30.5606 27.6894
CC013/GeniUncJ m 30.1 1.1889 32.4444 27.7556
CC017/UncJ f 28.58 0.9209 30.396 26.764
CC017/UncJ m 29.55 1.0297 31.5803 27.5197
CC018/UncJ f 28.8571 0.7783 30.3919 27.3224
CC018/UncJ m 29.475 0.7281 30.9106 28.0394
CC019/TauUncJ f 27.8875 0.7281 29.3231 26.4519
CC019/TauUncJ m 25.8125 0.7281 27.2481 24.3769
CC024/GeniUncJ f 30.5857 0.7783 32.1205 29.0509
CC024/GeniUncJ m 31.4125 0.7281 32.8481 29.9769
CC025/GeniUncJ f 28.26 0.9209 30.076 26.444
CC025/GeniUncJ m 28.41 0.6512 29.6941 27.1259
CC026/GeniUncJ f 27.1714 0.7783 28.7062 25.6367
CC026/GeniUncJ m 29.2875 0.7281 30.7231 27.8519
CC032/GeniUncJ f 26.5714 0.7783 28.1062 25.0367
CC032/GeniUncJ m 28.9143 0.7783 30.4491 27.3795
CC040/TauUncJ f 28.0 0.7281 29.4356 26.5644
CC040/TauUncJ m 28.8857 0.7783 30.4205 27.3509
CC041/TauUncJ f 29.3 0.7281 30.7356 27.8644
CC041/TauUncJ m 29.875 0.7281 31.3106 28.4394
CC051/TauUncJ f 26.9143 0.7783 28.4491 25.3795
CC051/TauUncJ m 28.0778 0.6864 29.4313 26.7242
CC068/TauUncJ f 28.04 0.9209 29.856 26.224
CC068/TauUncJ m 28.2 0.7281 29.6356 26.7644


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
CC002/UncJ both 27.4446 0.5329 28.4954 26.3939
CC003/UncJ both 29.1375 0.6907 30.4995 27.7755
CC004/TauUncJ both 28.585 0.587 29.7425 27.4275
CC006/TauUncJ both 29.1938 0.6305 30.4371 27.9504
CC009/UncJ both 30.9563 0.5148 31.9714 29.9411
CC013/GeniUncJ both 29.6125 0.6971 30.987 28.238
CC017/UncJ both 29.065 0.6907 30.427 27.703
CC018/UncJ both 29.1661 0.5329 30.2169 28.1153
CC019/TauUncJ both 26.85 0.5148 27.8652 25.8348
CC024/GeniUncJ both 30.9991 0.5329 32.0499 29.9483
CC025/GeniUncJ both 28.335 0.564 29.447 27.223
CC026/GeniUncJ both 28.2295 0.5329 29.2802 27.1787
CC032/GeniUncJ both 27.7429 0.5504 28.8281 26.6576
CC040/TauUncJ both 28.4429 0.5329 29.4936 27.3921
CC041/TauUncJ both 29.5875 0.5148 30.6027 28.5723
CC051/TauUncJ both 27.496 0.5189 28.5192 26.4729
CC068/TauUncJ both 28.12 0.587 29.2775 26.9625




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA