Project measure / variable:   JaxCC1   PPI_global

ID, description, units MPD:89076   PPI_global   average percent prepulse inhibition (PPI) evoked by global prepulse stimulus (74, 78, 82 dB), adjusted for background noise   [%]  
Data set, strains JaxCC1   CC   18 strains     sex: both     age: 9-11wks
Procedure acoustic startle test
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  STRAIN COMPARISON PLOT
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JaxCC1 - average percent prepulse inhibition (PPI) evoked by global prepulse stimulus (74, 78, 82 dB), adjusted for background noise



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested18 strains17 strains
Mean of the strain means0.0912   % 0.33881   %
Median of the strain means0.15831   % 0.16906   %
SD of the strain means± 0.4975 ± 0.52065
Coefficient of variation (CV)5.4548 1.5367
Min–max range of strain means-1.8231   –   0.47247   % -0.14706   –   1.7082   %
Mean sample size per strain7.0   mice 7.5   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 1.9028 1.9028 2.8739 0.0915
strain 16 6.5327 0.4083 0.6167 0.8688
sex:strain 16 38.0427 2.3777 3.5912 < 0.0001
Residuals 214 141.6858 0.6621


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
CC002/UncJ f 0.11687 0.40504   8 0.1432 3.4659 -0.77961, 0.45073 0.05
CC002/UncJ m 0.09069 0.11026   7 0.04167 1.2157 -0.04314, 0.27626 -0.48
CC003/UncJ f 0.28914 0.21636   5 0.09676 0.7483 0.05298, 0.63523 0.4
CC003/UncJ m 0.0914 0.22829   4 0.11415 2.4978 -0.14677, 0.37779 -0.48
CC004/TauUncJ f 0.0151 0.116   8 0.04101 7.6835 -0.23294, 0.15793 -0.15
CC004/TauUncJ m 0.24565 0.16521   8 0.05841 0.6726 0.07481, 0.57004 -0.18
CC006/TauUncJ f -1.8231 2.2207   4 1.1104 -1.2181 -5.0, 0.11628 -3.85
CC006/TauUncJ m 1.6294 2.2671   8 0.80156 1.3914 -0.16216, 6.8611 2.48
CC009/UncJ f 0.15502 0.04789   8 0.01693 0.309 0.10092, 0.23616 0.13
CC009/UncJ m 0.20521 0.27627   8 0.09768 1.3463 -0.19822, 0.74866 -0.26
CC010/GeniUncJ f 0.33409 0.11443   5 0.05117 0.3425 0.1991, 0.51641 0.49
CC013/GeniUncJ f 0.12857 2.9063   8 1.0275 22.6045 -6.5, 3.8194 0.08
CC013/GeniUncJ m 1.7082 2.1487   4 1.0744 1.2579 0.35606, 4.9167 2.63
CC017/UncJ f 0.20616 0.18802   6 0.07676 0.912 -0.08651, 0.47086 0.23
CC017/UncJ m 0.35725 0.0963   5 0.04307 0.2696 0.2771, 0.51074 0.04
CC018/UncJ f 0.12866 0.15286   8 0.05405 1.1881 -0.03231, 0.38648 0.08
CC018/UncJ m 0.10472 0.21423   8 0.07574 2.0457 -0.33984, 0.3076 -0.45
CC019/TauUncJ f 0.26917 0.22455   8 0.07939 0.8343 -0.09906, 0.63905 0.36
CC019/TauUncJ m 0.25154 0.24139   8 0.08534 0.9596 -0.12172, 0.53313 -0.17
CC024/GeniUncJ f 0.12966 0.09638   7 0.03643 0.7433 0.03447, 0.25706 0.08
CC024/GeniUncJ m 0.16301 0.09101   8 0.03218 0.5583 0.06179, 0.29085 -0.34
CC025/GeniUncJ f -0.07916 0.86569   6 0.35342 -10.9366 -1.735, 0.5941 -0.34
CC025/GeniUncJ m 0.07766 0.48213   10 0.15246 6.2086 -0.95614, 0.45144 -0.5
CC026/GeniUncJ f 0.1616 0.19078   8 0.06745 1.1805 -0.14985, 0.48835 0.14
CC026/GeniUncJ m 0.16906 0.11798   8 0.04171 0.6978 -0.01119, 0.31628 -0.33
CC032/GeniUncJ f 0.11339 0.18998   8 0.06717 1.6754 -0.08587, 0.34795 0.04
CC032/GeniUncJ m -0.05243 0.20746   8 0.07335 -3.9567 -0.41013, 0.18626 -0.75
CC040/TauUncJ f 0.38806 0.3038   8 0.10741 0.7829 0.02151, 0.72097 0.6
CC040/TauUncJ m -0.14706 0.97032   7 0.36675 -6.5982 -1.8974, 0.67328 -0.93
CC041/TauUncJ f 0.47247 0.10656   8 0.03767 0.2255 0.36758, 0.62646 0.77
CC041/TauUncJ m 0.47989 0.12343   8 0.04364 0.2572 0.35135, 0.68075 0.27
CC051/TauUncJ f 0.2334 0.08361   8 0.02956 0.3582 0.06344, 0.34227 0.29
CC051/TauUncJ m 0.14398 0.17346   10 0.05485 1.2047 -0.1182, 0.39294 -0.37
CC068/TauUncJ f 0.40255 0.29251   5 0.13081 0.7266 0.04143, 0.8146 0.63
CC068/TauUncJ m 0.24165 0.10047   8 0.03552 0.4158 0.08534, 0.37333 -0.19


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
CC002/UncJ f 0.1169 0.2877 0.6839 -0.4502
CC002/UncJ m 0.0907 0.3075 0.6969 -0.5155
CC003/UncJ f 0.2891 0.3639 1.0064 -0.4281
CC003/UncJ m 0.0914 0.4068 0.8933 -0.7105
CC004/TauUncJ f 0.0151 0.2877 0.5821 -0.552
CC004/TauUncJ m 0.2456 0.2877 0.8127 -0.3214
CC006/TauUncJ f -1.8231 0.4068 -1.0211 -2.625
CC006/TauUncJ m 1.6294 0.2877 2.1964 1.0623
CC009/UncJ f 0.155 0.2877 0.7221 -0.412
CC009/UncJ m 0.2052 0.2877 0.7723 -0.3618
CC013/GeniUncJ f 0.1286 0.2877 0.6956 -0.4385
CC013/GeniUncJ m 1.7082 0.4068 2.5101 0.9063
CC017/UncJ f 0.2062 0.3322 0.8609 -0.4486
CC017/UncJ m 0.3572 0.3639 1.0745 -0.36
CC018/UncJ f 0.1287 0.2877 0.6957 -0.4384
CC018/UncJ m 0.1047 0.2877 0.6718 -0.4623
CC019/TauUncJ f 0.2692 0.2877 0.8362 -0.2979
CC019/TauUncJ m 0.2515 0.2877 0.8186 -0.3155
CC024/GeniUncJ f 0.1297 0.3075 0.7359 -0.4765
CC024/GeniUncJ m 0.163 0.2877 0.7301 -0.404
CC025/GeniUncJ f -0.0792 0.3322 0.5756 -0.7339
CC025/GeniUncJ m 0.0777 0.2573 0.5848 -0.4295
CC026/GeniUncJ f 0.1616 0.2877 0.7287 -0.4054
CC026/GeniUncJ m 0.1691 0.2877 0.7361 -0.398
CC032/GeniUncJ f 0.1134 0.2877 0.6804 -0.4537
CC032/GeniUncJ m -0.0524 0.2877 0.5146 -0.6195
CC040/TauUncJ f 0.3881 0.2877 0.9551 -0.179
CC040/TauUncJ m -0.1471 0.3075 0.4591 -0.7533
CC041/TauUncJ f 0.4725 0.2877 1.0395 -0.0946
CC041/TauUncJ m 0.4799 0.2877 1.0469 -0.0872
CC051/TauUncJ f 0.2334 0.2877 0.8005 -0.3336
CC051/TauUncJ m 0.144 0.2573 0.6512 -0.3632
CC068/TauUncJ f 0.4025 0.3639 1.1198 -0.3147
CC068/TauUncJ m 0.2416 0.2877 0.8087 -0.3254


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
CC002/UncJ both 0.1038 0.2106 0.5188 -0.3113
CC003/UncJ both 0.1903 0.2729 0.7282 -0.3477
CC004/TauUncJ both 0.1304 0.2034 0.5313 -0.2706
CC006/TauUncJ both -0.0968 0.2491 0.3942 -0.5879
CC009/UncJ both 0.1801 0.2034 0.5811 -0.2209
CC013/GeniUncJ both 0.9184 0.2491 1.4095 0.4273
CC017/UncJ both 0.2817 0.2464 0.7673 -0.2039
CC018/UncJ both 0.1167 0.2034 0.5177 -0.2843
CC019/TauUncJ both 0.2604 0.2034 0.6613 -0.1406
CC024/GeniUncJ both 0.1463 0.2106 0.5614 -0.2687
CC025/GeniUncJ both -0.0008 0.2101 0.4134 -0.4149
CC026/GeniUncJ both 0.1653 0.2034 0.5663 -0.2356
CC032/GeniUncJ both 0.0305 0.2034 0.4314 -0.3705
CC040/TauUncJ both 0.1205 0.2106 0.5355 -0.2945
CC041/TauUncJ both 0.4762 0.2034 0.8771 0.0752
CC051/TauUncJ both 0.1887 0.193 0.5691 -0.1917
CC068/TauUncJ both 0.3221 0.2319 0.7793 -0.1351




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA