Project measure / variable:   JaxCC1   PPI_global

ID, description, units MPD:89076   PPI_global   average percent prepulse inhibition (PPI) evoked by global prepulse stimulus (74, 78, 82 dB), adjusted for background noise   [%]  
Data set, strains JaxCC1   CC   18 strains     sex: both     age: 9-11wks
Procedure acoustic startle test
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  STRAIN COMPARISON PLOT
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JaxCC1 - average percent prepulse inhibition (PPI) evoked by global prepulse stimulus (74, 78, 82 dB), adjusted for background noise

CC013/GeniUncJCC041/TauUncJCC010/GeniUncJCC068/TauUncJCC017/UncJCC019/TauUncJCC003/UncJCC051/TauUncJCC009/UncJCC026/GeniUncJCC024/GeniUncJCC004/TauUncJCC040/TauUncJCC018/UncJCC002/UncJCC032/GeniUncJCC025/GeniUncJCC006/TauUncJ % -6-4-20246femalemale


  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested18 strains17 strains
Mean of the strain means0.0912   % 0.33881   %
Median of the strain means0.15831   % 0.16906   %
SD of the strain means± 0.4975 ± 0.52065
Coefficient of variation (CV)5.4548 1.5367
Min–max range of strain means-1.8231   –   0.47247   % -0.14706   –   1.7082   %
Mean sample size per strain7.0   mice 7.5   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 1.9028 1.9028 2.8739 0.0915
strain 16 6.5327 0.4083 0.6167 0.8688
sex:strain 16 38.0427 2.3777 3.5912 < 0.0001
Residuals 214 141.6858 0.6621


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page: 1 - 10 / 35 (35)
Strain
Sex
Mean
SD
N mice
SEM
CV
Min, Max
Z score
CC002/UncJ f 0.11687 0.40504   8 0.1432 3.4659 -0.77961, 0.45073 0.05
CC002/UncJ m 0.09069 0.11026   7 0.04167 1.2157 -0.04314, 0.27626 -0.48
CC003/UncJ f 0.28914 0.21636   5 0.09676 0.7483 0.05298, 0.63523 0.4
CC003/UncJ m 0.0914 0.22829   4 0.11415 2.4978 -0.14677, 0.37779 -0.48
CC004/TauUncJ f 0.0151 0.116   8 0.04101 7.6835 -0.23294, 0.15793 -0.15
CC004/TauUncJ m 0.24565 0.16521   8 0.05841 0.6726 0.07481, 0.57004 -0.18
CC006/TauUncJ f -1.8231 2.2207   4 1.1104 -1.2181 -5.0, 0.11628 -3.85
CC006/TauUncJ m 1.6294 2.2671   8 0.80156 1.3914 -0.16216, 6.8611 2.48
CC009/UncJ f 0.15502 0.04789   8 0.01693 0.309 0.10092, 0.23616 0.13
CC009/UncJ m 0.20521 0.27627   8 0.09768 1.3463 -0.19822, 0.74866 -0.26
CC010/GeniUncJ f 0.33409 0.11443   5 0.05117 0.3425 0.1991, 0.51641 0.49
CC013/GeniUncJ f 0.12857 2.9063   8 1.0275 22.6045 -6.5, 3.8194 0.08
CC013/GeniUncJ m 1.7082 2.1487   4 1.0744 1.2579 0.35606, 4.9167 2.63
CC017/UncJ f 0.20616 0.18802   6 0.07676 0.912 -0.08651, 0.47086 0.23
CC017/UncJ m 0.35725 0.0963   5 0.04307 0.2696 0.2771, 0.51074 0.04
CC018/UncJ f 0.12866 0.15286   8 0.05405 1.1881 -0.03231, 0.38648 0.08
CC018/UncJ m 0.10472 0.21423   8 0.07574 2.0457 -0.33984, 0.3076 -0.45
CC019/TauUncJ f 0.26917 0.22455   8 0.07939 0.8343 -0.09906, 0.63905 0.36
CC019/TauUncJ m 0.25154 0.24139   8 0.08534 0.9596 -0.12172, 0.53313 -0.17
CC024/GeniUncJ f 0.12966 0.09638   7 0.03643 0.7433 0.03447, 0.25706 0.08
CC024/GeniUncJ m 0.16301 0.09101   8 0.03218 0.5583 0.06179, 0.29085 -0.34
CC025/GeniUncJ f -0.07916 0.86569   6 0.35342 -10.9366 -1.735, 0.5941 -0.34
CC025/GeniUncJ m 0.07766 0.48213   10 0.15246 6.2086 -0.95614, 0.45144 -0.5
CC026/GeniUncJ f 0.1616 0.19078   8 0.06745 1.1805 -0.14985, 0.48835 0.14
CC026/GeniUncJ m 0.16906 0.11798   8 0.04171 0.6978 -0.01119, 0.31628 -0.33
CC032/GeniUncJ f 0.11339 0.18998   8 0.06717 1.6754 -0.08587, 0.34795 0.04
CC032/GeniUncJ m -0.05243 0.20746   8 0.07335 -3.9567 -0.41013, 0.18626 -0.75
CC040/TauUncJ f 0.38806 0.3038   8 0.10741 0.7829 0.02151, 0.72097 0.6
CC040/TauUncJ m -0.14706 0.97032   7 0.36675 -6.5982 -1.8974, 0.67328 -0.93
CC041/TauUncJ f 0.47247 0.10656   8 0.03767 0.2255 0.36758, 0.62646 0.77
CC041/TauUncJ m 0.47989 0.12343   8 0.04364 0.2572 0.35135, 0.68075 0.27
CC051/TauUncJ f 0.2334 0.08361   8 0.02956 0.3582 0.06344, 0.34227 0.29
CC051/TauUncJ m 0.14398 0.17346   10 0.05485 1.2047 -0.1182, 0.39294 -0.37
CC068/TauUncJ f 0.40255 0.29251   5 0.13081 0.7266 0.04143, 0.8146 0.63
CC068/TauUncJ m 0.24165 0.10047   8 0.03552 0.4158 0.08534, 0.37333 -0.19


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
CC002/UncJ f 0.1169 0.2877 0.6839 -0.4502
CC002/UncJ m 0.0907 0.3075 0.6969 -0.5155
CC003/UncJ f 0.2891 0.3639 1.0064 -0.4281
CC003/UncJ m 0.0914 0.4068 0.8933 -0.7105
CC004/TauUncJ f 0.0151 0.2877 0.5821 -0.552
CC004/TauUncJ m 0.2456 0.2877 0.8127 -0.3214
CC006/TauUncJ f -1.8231 0.4068 -1.0211 -2.625
CC006/TauUncJ m 1.6294 0.2877 2.1964 1.0623
CC009/UncJ f 0.155 0.2877 0.7221 -0.412
CC009/UncJ m 0.2052 0.2877 0.7723 -0.3618
CC013/GeniUncJ f 0.1286 0.2877 0.6956 -0.4385
CC013/GeniUncJ m 1.7082 0.4068 2.5101 0.9063
CC017/UncJ f 0.2062 0.3322 0.8609 -0.4486
CC017/UncJ m 0.3572 0.3639 1.0745 -0.36
CC018/UncJ f 0.1287 0.2877 0.6957 -0.4384
CC018/UncJ m 0.1047 0.2877 0.6718 -0.4623
CC019/TauUncJ f 0.2692 0.2877 0.8362 -0.2979
CC019/TauUncJ m 0.2515 0.2877 0.8186 -0.3155
CC024/GeniUncJ f 0.1297 0.3075 0.7359 -0.4765
CC024/GeniUncJ m 0.163 0.2877 0.7301 -0.404
CC025/GeniUncJ f -0.0792 0.3322 0.5756 -0.7339
CC025/GeniUncJ m 0.0777 0.2573 0.5848 -0.4295
CC026/GeniUncJ f 0.1616 0.2877 0.7287 -0.4054
CC026/GeniUncJ m 0.1691 0.2877 0.7361 -0.398
CC032/GeniUncJ f 0.1134 0.2877 0.6804 -0.4537
CC032/GeniUncJ m -0.0524 0.2877 0.5146 -0.6195
CC040/TauUncJ f 0.3881 0.2877 0.9551 -0.179
CC040/TauUncJ m -0.1471 0.3075 0.4591 -0.7533
CC041/TauUncJ f 0.4725 0.2877 1.0395 -0.0946
CC041/TauUncJ m 0.4799 0.2877 1.0469 -0.0872
CC051/TauUncJ f 0.2334 0.2877 0.8005 -0.3336
CC051/TauUncJ m 0.144 0.2573 0.6512 -0.3632
CC068/TauUncJ f 0.4025 0.3639 1.1198 -0.3147
CC068/TauUncJ m 0.2416 0.2877 0.8087 -0.3254


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
CC002/UncJ both 0.1038 0.2106 0.5188 -0.3113
CC003/UncJ both 0.1903 0.2729 0.7282 -0.3477
CC004/TauUncJ both 0.1304 0.2034 0.5313 -0.2706
CC006/TauUncJ both -0.0968 0.2491 0.3942 -0.5879
CC009/UncJ both 0.1801 0.2034 0.5811 -0.2209
CC013/GeniUncJ both 0.9184 0.2491 1.4095 0.4273
CC017/UncJ both 0.2817 0.2464 0.7673 -0.2039
CC018/UncJ both 0.1167 0.2034 0.5177 -0.2843
CC019/TauUncJ both 0.2604 0.2034 0.6613 -0.1406
CC024/GeniUncJ both 0.1463 0.2106 0.5614 -0.2687
CC025/GeniUncJ both -0.0008 0.2101 0.4134 -0.4149
CC026/GeniUncJ both 0.1653 0.2034 0.5663 -0.2356
CC032/GeniUncJ both 0.0305 0.2034 0.4314 -0.3705
CC040/TauUncJ both 0.1205 0.2106 0.5355 -0.2945
CC041/TauUncJ both 0.4762 0.2034 0.8771 0.0752
CC051/TauUncJ both 0.1887 0.193 0.5691 -0.1917
CC068/TauUncJ both 0.3221 0.2319 0.7793 -0.1351




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA