Project measure / variable:   JaxCC1   ASR_82

ID, description, units MPD:89064   ASR_82   average acoustic startle response (ASR), adjusted for background noise   [amplitude]  82 dB sound pressure level  
Data set, strains JaxCC1   CC   18 strains     sex: both     age: 9-11wks
Procedure acoustic startle test
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  STRAIN COMPARISON PLOT
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JaxCC1 - average acoustic startle response (ASR), adjusted for background noise 82 dB sound pressure level



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested18 strains17 strains
Mean of the strain means364.6   amplitude 460.1   amplitude
Median of the strain means325.4   amplitude 380.1   amplitude
SD of the strain means± 283.9 ± 352.0
Coefficient of variation (CV)0.7788 0.7652
Min–max range of strain means34.876   –   1082.0   amplitude 29.643   –   1046.0   amplitude
Mean sample size per strain7.0   mice 7.5   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 487031.1497 487031.1497 10.5973 0.0013
strain 16 23992339.4534 1499521.2158 32.628 < 0.0001
sex:strain 16 1602517.6292 100157.3518 2.1793 0.0067
Residuals 214 9835045.7414 45958.1577


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
CC002/UncJ f 569.8 188.4   8 66.62 0.3307 267.7, 820.5 0.72
CC002/UncJ m 714.5 370.7   7 140.1 0.5188 342.5, 1295.0 0.72
CC003/UncJ f 379.3 203.3   5 90.92 0.5359 128.3, 661.7 0.05
CC003/UncJ m 380.1 160.3   4 80.17 0.4218 218.0, 582.8 -0.23
CC004/TauUncJ f 1082.0 399.8   8 141.3 0.3696 495.7, 1479.0 2.53
CC004/TauUncJ m 953.3 506.9   8 179.2 0.5317 115.5, 1622.0 1.4
CC006/TauUncJ f 107.7 76.34   4 38.172 0.7091 40.667, 199.3 -0.9
CC006/TauUncJ m 95.33 102.5   8 36.24 1.0752 22.667, 324.7 -1.04
CC009/UncJ f 490.4 199.5   8 70.55 0.4069 196.2, 742.3 0.44
CC009/UncJ m 353.6 258.3   8 91.34 0.7305 74.0, 809.8 -0.3
CC010/GeniUncJ f 210.9 114.9   5 51.39 0.545 114.7, 352.3 -0.54
CC013/GeniUncJ f 76.19 131.9   8 46.628 1.7309 19.667, 402.2 -1.02
CC013/GeniUncJ m 37.167 17.582   4 8.7911 0.4731 21.833, 62.5 -1.2
CC017/UncJ f 382.2 108.1   6 44.112 0.2827 256.5, 516.8 0.06
CC017/UncJ m 490.2 175.8   5 78.64 0.3587 352.5, 791.2 0.09
CC018/UncJ f 552.6 193.2   8 68.31 0.3496 184.7, 770.5 0.66
CC018/UncJ m 921.9 319.1   8 112.8 0.3461 478.5, 1554.0 1.31
CC019/TauUncJ f 271.5 116.7   8 41.249 0.4297 87.17, 439.3 -0.33
CC019/TauUncJ m 179.6 82.86   8 29.294 0.4614 57.67, 306.0 -0.8
CC024/GeniUncJ f 768.9 181.5   7 68.59 0.236 532.3, 1097.0 1.42
CC024/GeniUncJ m 1046.0 232.3   8 82.14 0.2221 644.7, 1399.0 1.66
CC025/GeniUncJ f 52.05 18.733   6 7.6478 0.3599 21.5, 72.33 -1.1
CC025/GeniUncJ m 56.97 22.368   10 7.0735 0.3927 14.167, 87.83 -1.15
CC026/GeniUncJ f 260.0 122.0   8 43.145 0.4694 99.33, 417.5 -0.37
CC026/GeniUncJ m 301.8 96.42   8 34.089 0.3195 179.2, 492.2 -0.45
CC032/GeniUncJ f 386.9 197.5   8 69.84 0.5106 100.7, 642.0 0.08
CC032/GeniUncJ m 579.9 299.8   8 106.0 0.517 120.3, 1011.0 0.34
CC040/TauUncJ f 34.876 11.414   8 4.0356 0.3273 19.667, 56.17 -1.16
CC040/TauUncJ m 29.643 9.0471   7 3.4195 0.3052 21.333, 47.167 -1.22
CC041/TauUncJ f 107.3 36.55   8 12.922 0.3405 62.67, 176.7 -0.91
CC041/TauUncJ m 193.3 262.1   8 92.67 1.3559 34.167, 686.8 -0.76
CC051/TauUncJ f 667.6 284.7   8 100.7 0.4265 324.5, 1138.0 1.07
CC051/TauUncJ m 955.6 210.7   10 66.64 0.2205 714.7, 1343.0 1.41
CC068/TauUncJ f 161.7 103.1   5 46.097 0.6376 22.833, 301.0 -0.71
CC068/TauUncJ m 532.1 164.2   8 58.07 0.3086 324.7, 729.8 0.2


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
CC002/UncJ f 569.8 75.7943 719.1989 420.4011
CC002/UncJ m 714.4857 81.0275 874.1999 554.7716
CC003/UncJ f 379.34 95.873 568.3163 190.3637
CC003/UncJ m 380.125 107.1893 591.407 168.843
CC004/TauUncJ f 1081.7 75.7943 1231.0989 932.3011
CC004/TauUncJ m 953.3375 75.7943 1102.7364 803.9386
CC006/TauUncJ f 107.6668 107.1893 318.9487 -103.6152
CC006/TauUncJ m 95.3343 75.7943 244.7332 -54.0647
CC009/UncJ f 490.375 75.7943 639.7739 340.9761
CC009/UncJ m 353.65 75.7943 503.0489 204.2511
CC013/GeniUncJ f 76.1916 75.7943 225.5905 -73.2073
CC013/GeniUncJ m 37.1668 107.1893 248.4487 -174.1152
CC017/UncJ f 382.1833 87.5197 554.6943 209.6723
CC017/UncJ m 490.22 95.873 679.1963 301.2437
CC018/UncJ f 552.6375 75.7943 702.0364 403.2386
CC018/UncJ m 921.8625 75.7943 1071.2614 772.4636
CC019/TauUncJ f 271.5213 75.7943 420.9202 122.1223
CC019/TauUncJ m 179.5713 75.7943 328.9702 30.1723
CC024/GeniUncJ f 768.9429 81.0275 928.657 609.2287
CC024/GeniUncJ m 1046.1125 75.7943 1195.5114 896.7136
CC025/GeniUncJ f 52.055 87.5197 224.566 -120.456
CC025/GeniUncJ m 56.9667 67.7924 190.5932 -76.6598
CC026/GeniUncJ f 259.9663 75.7943 409.3652 110.5673
CC026/GeniUncJ m 301.7875 75.7943 451.1864 152.3886
CC032/GeniUncJ f 386.9125 75.7943 536.3114 237.5136
CC032/GeniUncJ m 579.875 75.7943 729.2739 430.4761
CC040/TauUncJ f 34.8755 75.7943 184.2744 -114.5234
CC040/TauUncJ m 29.6427 81.0275 189.3569 -130.0714
CC041/TauUncJ f 107.33 75.7943 256.7289 -42.0689
CC041/TauUncJ m 193.3085 75.7943 342.7074 43.9096
CC051/TauUncJ f 667.6125 75.7943 817.0114 518.2136
CC051/TauUncJ m 955.61 67.7924 1089.2365 821.9835
CC068/TauUncJ f 161.6666 95.873 350.6429 -27.3097
CC068/TauUncJ m 532.1375 75.7943 681.5364 382.7386


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
CC002/UncJ both 642.1429 55.4757 751.4917 532.794
CC003/UncJ both 379.7325 71.9047 521.4648 238.0002
CC004/TauUncJ both 1017.5188 53.5946 1123.1597 911.8778
CC006/TauUncJ both 101.5005 65.6398 230.8838 -27.8828
CC009/UncJ both 422.0125 53.5946 527.6535 316.3715
CC013/GeniUncJ both 56.6792 65.6398 186.0624 -72.7041
CC017/UncJ both 436.2017 64.9063 564.1393 308.2641
CC018/UncJ both 737.25 53.5946 842.891 631.609
CC019/TauUncJ both 225.5463 53.5946 331.1872 119.9053
CC024/GeniUncJ both 907.5277 55.4757 1016.8765 798.1789
CC025/GeniUncJ both 54.5108 55.3523 163.6164 -54.5947
CC026/GeniUncJ both 280.8769 53.5946 386.5179 175.2359
CC032/GeniUncJ both 483.3938 53.5946 589.0347 377.7528
CC040/TauUncJ both 32.2591 55.4757 141.6079 -77.0897
CC041/TauUncJ both 150.3193 53.5946 255.9602 44.6783
CC051/TauUncJ both 811.6113 50.8443 911.8311 711.3914
CC068/TauUncJ both 346.9021 61.1073 467.3513 226.4528




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA