Project measure / variable:   JaxCC1   ASR_78

ID, description, units MPD:89063   ASR_78   average acoustic startle response (ASR), adjusted for background noise   [amplitude]  78 dB sound pressure level  
Data set, strains JaxCC1   CC   18 strains     sex: both     age: 9-11wks
Procedure acoustic startle test
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  STRAIN COMPARISON PLOT
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JaxCC1 - average acoustic startle response (ASR), adjusted for background noise 78 dB sound pressure level



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested18 strains17 strains
Mean of the strain means473.0   amplitude 615.0   amplitude
Median of the strain means377.8   amplitude 571.4   amplitude
SD of the strain means± 360.8 ± 452.4
Coefficient of variation (CV)0.7628 0.7356
Min–max range of strain means48.772   –   1421.0   amplitude 45.785   –   1370.0   amplitude
Mean sample size per strain7.0   mice 7.5   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 1021492.3594 1021492.3594 15.0409 0.0001
strain 16 38874090.3223 2429630.6451 35.7749 < 0.0001
sex:strain 16 2929775.5942 183110.9746 2.6962 0.0006
Residuals 214 14533686.2618 67914.4218


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
CC002/UncJ f 805.1 268.0   8 94.73 0.3328 394.0, 1292.0 0.92
CC002/UncJ m 997.6 459.7   7 173.7 0.4608 423.0, 1692.0 0.85
CC003/UncJ f 550.3 232.2   5 103.9 0.422 344.3, 949.7 0.21
CC003/UncJ m 633.0 280.9   4 140.4 0.4437 298.7, 968.3 0.04
CC004/TauUncJ f 1421.0 435.4   8 153.9 0.3063 696.5, 1895.0 2.63
CC004/TauUncJ m 1370.0 610.3   8 215.8 0.4453 123.5, 2054.0 1.67
CC006/TauUncJ f 98.43 63.57   4 31.786 0.6458 32.5, 163.7 -1.04
CC006/TauUncJ m 168.5 192.7   8 68.12 1.1433 35.0, 568.8 -0.99
CC009/UncJ f 650.1 258.8   8 91.51 0.3981 282.3, 960.2 0.49
CC009/UncJ m 459.2 328.6   8 116.2 0.7157 131.8, 1135.0 -0.34
CC010/GeniUncJ f 221.1 103.2   5 46.164 0.4668 100.2, 345.7 -0.7
CC013/GeniUncJ f 48.772 12.941   8 4.5752 0.2653 34.167, 64.17 -1.18
CC013/GeniUncJ m 51.71 16.363   4 8.1814 0.3164 33.333, 73.17 -1.25
CC017/UncJ f 540.5 135.2   6 55.19 0.2501 371.2, 706.3 0.19
CC017/UncJ m 595.9 121.1   5 54.18 0.2033 450.2, 776.5 -0.04
CC018/UncJ f 640.4 148.4   8 52.47 0.2318 363.0, 780.3 0.46
CC018/UncJ m 1193.0 601.9   8 212.8 0.5044 425.0, 2202.0 1.28
CC019/TauUncJ f 379.4 136.1   8 48.109 0.3586 164.3, 518.5 -0.26
CC019/TauUncJ m 237.5 144.7   8 51.15 0.6091 44.833, 421.8 -0.83
CC024/GeniUncJ f 844.1 167.9   7 63.45 0.1989 677.0, 1109.0 1.03
CC024/GeniUncJ m 1169.0 181.8   8 64.27 0.1556 886.2, 1441.0 1.22
CC025/GeniUncJ f 86.81 35.202   6 14.371 0.4055 48.833, 145.7 -1.07
CC025/GeniUncJ m 71.29 38.608   10 12.209 0.5416 18.0, 132.7 -1.2
CC026/GeniUncJ f 363.6 124.8   8 44.124 0.3432 241.7, 606.2 -0.3
CC026/GeniUncJ m 396.6 103.4   8 36.541 0.2606 200.8, 515.0 -0.48
CC032/GeniUncJ f 376.2 145.5   8 51.42 0.3866 152.2, 581.8 -0.27
CC032/GeniUncJ m 571.4 249.4   8 88.17 0.4365 210.8, 813.8 -0.1
CC040/TauUncJ f 51.67 17.017   8 6.0166 0.3294 18.833, 71.67 -1.17
CC040/TauUncJ m 45.785 27.643   7 10.448 0.6038 20.667, 97.83 -1.26
CC041/TauUncJ f 294.9 93.74   8 33.144 0.3179 142.3, 397.8 -0.49
CC041/TauUncJ m 376.3 280.0   8 98.98 0.744 64.17, 884.7 -0.53
CC051/TauUncJ f 891.4 285.6   8 101.0 0.3204 587.7, 1414.0 1.16
CC051/TauUncJ m 1296.0 342.1   10 108.2 0.2639 904.2, 2060.0 1.51
CC068/TauUncJ f 251.0 200.0   5 89.43 0.7968 20.5, 523.2 -0.62
CC068/TauUncJ m 822.3 157.5   8 55.68 0.1915 578.5, 974.2 0.46


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
CC002/UncJ f 805.1375 92.1374 986.7506 623.5244
CC002/UncJ m 997.5571 98.499 1191.7097 803.4046
CC003/UncJ f 550.28 116.5456 780.0044 320.5556
CC003/UncJ m 632.95 130.302 889.7897 376.1103
CC004/TauUncJ f 1421.275 92.1374 1602.8881 1239.6619
CC004/TauUncJ m 1370.3125 92.1374 1551.9256 1188.6994
CC006/TauUncJ f 98.4325 130.302 355.2722 -158.4072
CC006/TauUncJ m 168.5163 92.1374 350.1293 -13.0968
CC009/UncJ f 650.075 92.1374 831.6881 468.4619
CC009/UncJ m 459.1875 92.1374 640.8006 277.5744
CC013/GeniUncJ f 48.772 92.1374 230.3851 -132.8411
CC013/GeniUncJ m 51.709 130.302 308.5487 -205.1307
CC017/UncJ f 540.5 106.3911 750.2087 330.7913
CC017/UncJ m 595.92 116.5456 825.6444 366.1956
CC018/UncJ f 640.35 92.1374 821.9631 458.7369
CC018/UncJ m 1193.175 92.1374 1374.7881 1011.5619
CC019/TauUncJ f 379.4125 92.1374 561.0256 197.7994
CC019/TauUncJ m 237.5166 92.1374 419.1297 55.9035
CC024/GeniUncJ f 844.1286 98.499 1038.2811 649.976
CC024/GeniUncJ m 1168.625 92.1374 1350.2381 987.0119
CC025/GeniUncJ f 86.8055 106.3911 296.5142 -122.9032
CC025/GeniUncJ m 71.287 82.4102 233.7267 -91.1527
CC026/GeniUncJ f 363.6125 92.1374 545.2256 181.9994
CC026/GeniUncJ m 396.575 92.1374 578.1881 214.9619
CC032/GeniUncJ f 376.25 92.1374 557.8631 194.6369
CC032/GeniUncJ m 571.35 92.1374 752.9631 389.7369
CC040/TauUncJ f 51.667 92.1374 233.2801 -129.9461
CC040/TauUncJ m 45.7847 98.499 239.9373 -148.3678
CC041/TauUncJ f 294.85 92.1374 476.4631 113.2369
CC041/TauUncJ m 376.3213 92.1374 557.9343 194.7082
CC051/TauUncJ f 891.4 92.1374 1073.0131 709.7869
CC051/TauUncJ m 1296.32 82.4102 1458.7597 1133.8803
CC068/TauUncJ f 250.98 116.5456 480.7044 21.2556
CC068/TauUncJ m 822.3 92.1374 1003.9131 640.6869


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
CC002/UncJ both 901.3473 67.4377 1034.2745 768.4202
CC003/UncJ both 591.615 87.4092 763.9083 419.3217
CC004/TauUncJ both 1395.7938 65.151 1524.2136 1267.3739
CC006/TauUncJ both 133.4744 79.7933 290.7559 -23.8072
CC009/UncJ both 554.6313 65.151 683.0511 426.2114
CC013/GeniUncJ both 50.2405 79.7933 207.522 -107.041
CC017/UncJ both 568.21 78.9018 723.7342 412.6858
CC018/UncJ both 916.7625 65.151 1045.1823 788.3427
CC019/TauUncJ both 308.4646 65.151 436.8844 180.0447
CC024/GeniUncJ both 1006.3768 67.4377 1139.304 873.4496
CC025/GeniUncJ both 79.0463 67.2877 211.6777 -53.5852
CC026/GeniUncJ both 380.0938 65.151 508.5136 251.6739
CC032/GeniUncJ both 473.8 65.151 602.2198 345.3802
CC040/TauUncJ both 48.7259 67.4377 181.653 -84.2013
CC041/TauUncJ both 335.5856 65.151 464.0055 207.1658
CC051/TauUncJ both 1093.86 61.8077 1215.6898 972.0302
CC068/TauUncJ both 536.64 74.2836 683.0612 390.2188




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA