Project measure / variable:   JaxCC1   ASR_74

ID, description, units MPD:89062   ASR_74   average acoustic startle response (ASR), adjusted for background noise   [amplitude]  74 dB sound pressure level  
Data set, strains JaxCC1   CC   18 strains     sex: both     age: 9-11wks
Procedure acoustic startle test
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  STRAIN COMPARISON PLOT
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JaxCC1 - average acoustic startle response (ASR), adjusted for background noise 74 dB sound pressure level



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested18 strains17 strains
Mean of the strain means622.8   amplitude 755.3   amplitude
Median of the strain means593.0   amplitude 806.9   amplitude
SD of the strain means± 430.1 ± 534.7
Coefficient of variation (CV)0.6906 0.7079
Min–max range of strain means55.6   –   1528.0   amplitude 44.429   –   1710.0   amplitude
Mean sample size per strain7.0   mice 7.5   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 716871.7318 716871.7318 10.9409 0.0011
strain 16 53682712.1269 3355169.5079 51.2065 < 0.0001
sex:strain 16 3242341.4088 202646.3381 3.0928 0.0001
Residuals 214 14021792.4184 65522.3945


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
CC002/UncJ f 1172.0 367.7   8 130.0 0.3138 534.7, 1581.0 1.28
CC002/UncJ m 1119.0 477.1   7 180.3 0.4264 434.0, 1890.0 0.68
CC003/UncJ f 1065.0 168.7   5 75.44 0.1584 892.7, 1333.0 1.03
CC003/UncJ m 1188.0 422.7   4 211.3 0.3558 581.0, 1508.0 0.81
CC004/TauUncJ f 1528.0 444.8   8 157.3 0.2912 627.3, 2031.0 2.1
CC004/TauUncJ m 1710.0 517.7   8 183.0 0.3027 769.0, 2331.0 1.79
CC006/TauUncJ f 126.6 101.2   4 50.6 0.7995 28.667, 242.5 -1.15
CC006/TauUncJ m 138.6 141.2   8 49.907 1.0187 40.167, 366.2 -1.15
CC009/UncJ f 741.3 321.0   8 113.5 0.433 297.8, 1198.0 0.28
CC009/UncJ m 546.0 364.3   8 128.8 0.6673 95.33, 1148.0 -0.39
CC010/GeniUncJ f 337.0 168.7   5 75.46 0.5006 178.2, 593.3 -0.66
CC013/GeniUncJ f 55.6 24.018   8 8.4915 0.432 21.333, 101.8 -1.32
CC013/GeniUncJ m 58.62 12.687   4 6.3436 0.2164 44.833, 73.33 -1.3
CC017/UncJ f 727.0 88.04   6 35.941 0.1211 616.8, 842.5 0.24
CC017/UncJ m 818.5 170.1   5 76.07 0.2078 631.5, 1058.0 0.12
CC018/UncJ f 709.2 87.11   8 30.797 0.1228 575.3, 807.3 0.2
CC018/UncJ m 1316.0 313.4   8 110.8 0.2382 882.8, 1773.0 1.05
CC019/TauUncJ f 546.9 151.6   8 53.61 0.2773 275.2, 672.2 -0.18
CC019/TauUncJ m 306.7 153.0   8 54.11 0.499 42.333, 537.2 -0.84
CC024/GeniUncJ f 974.3 219.9   7 83.11 0.2257 643.8, 1212.0 0.82
CC024/GeniUncJ m 1316.0 186.6   8 65.99 0.1418 1034.0, 1528.0 1.05
CC025/GeniUncJ f 88.87 52.62   6 21.481 0.5921 34.333, 187.2 -1.24
CC025/GeniUncJ m 99.24 56.52   10 17.875 0.5696 22.0, 193.7 -1.23
CC026/GeniUncJ f 510.1 101.1   8 35.746 0.1982 345.8, 678.7 -0.26
CC026/GeniUncJ m 482.4 154.4   8 54.6 0.3201 236.0, 655.8 -0.51
CC032/GeniUncJ f 402.5 162.4   8 57.42 0.4035 193.7, 568.0 -0.51
CC032/GeniUncJ m 503.9 238.6   8 84.36 0.4736 153.5, 779.7 -0.47
CC040/TauUncJ f 71.46 68.19   8 24.109 0.9543 23.833, 235.0 -1.28
CC040/TauUncJ m 44.429 12.015   7 4.5414 0.2704 30.167, 61.83 -1.33
CC041/TauUncJ f 639.0 156.7   8 55.39 0.2452 384.2, 856.2 0.04
CC041/TauUncJ m 806.9 354.2   8 125.2 0.439 305.8, 1440.0 0.1
CC051/TauUncJ f 1164.0 272.3   8 96.28 0.234 882.8, 1783.0 1.26
CC051/TauUncJ m 1458.0 382.3   10 120.9 0.2622 999.3, 2267.0 1.31
CC068/TauUncJ f 351.6 187.6   5 83.9 0.5336 45.667, 545.3 -0.63
CC068/TauUncJ m 927.8 205.9   8 72.79 0.2219 518.5, 1188.0 0.32


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
CC002/UncJ f 1171.8125 90.5003 1350.1986 993.4264
CC002/UncJ m 1118.8571 96.7489 1309.5599 928.1544
CC003/UncJ f 1065.14 114.4748 1290.7826 839.4974
CC003/UncJ m 1188.0 127.9867 1440.2761 935.7239
CC004/TauUncJ f 1527.6625 90.5003 1706.0486 1349.2764
CC004/TauUncJ m 1710.125 90.5003 1888.5111 1531.7389
CC006/TauUncJ f 126.5843 127.9867 378.8603 -125.6918
CC006/TauUncJ m 138.5666 90.5003 316.9527 -39.8195
CC009/UncJ f 741.2875 90.5003 919.6736 562.9014
CC009/UncJ m 545.9825 90.5003 724.3686 367.5964
CC013/GeniUncJ f 55.5996 90.5003 233.9857 -122.7865
CC013/GeniUncJ m 58.6233 127.9867 310.8993 -193.6528
CC017/UncJ f 727.0333 104.5007 933.0159 521.0508
CC017/UncJ m 818.46 114.4748 1044.1026 592.8174
CC018/UncJ f 709.1875 90.5003 887.5736 530.8014
CC018/UncJ m 1315.725 90.5003 1494.1111 1137.3389
CC019/TauUncJ f 546.8625 90.5003 725.2486 368.4764
CC019/TauUncJ m 306.6916 90.5003 485.0777 128.3055
CC024/GeniUncJ f 974.2857 96.7489 1164.9885 783.5829
CC024/GeniUncJ m 1316.25 90.5003 1494.6361 1137.8639
CC025/GeniUncJ f 88.8672 104.5007 294.8497 -117.1154
CC025/GeniUncJ m 99.2427 80.9459 258.7961 -60.3107
CC026/GeniUncJ f 510.125 90.5003 688.5111 331.7389
CC026/GeniUncJ m 482.4 90.5003 660.7861 304.0139
CC032/GeniUncJ f 402.55 90.5003 580.9361 224.1639
CC032/GeniUncJ m 503.85 90.5003 682.2361 325.4639
CC040/TauUncJ f 71.4582 90.5003 249.8444 -106.9279
CC040/TauUncJ m 44.4287 96.7489 235.1315 -146.2741
CC041/TauUncJ f 638.975 90.5003 817.3611 460.5889
CC041/TauUncJ m 806.8875 90.5003 985.2736 628.5014
CC051/TauUncJ f 1163.6 90.5003 1341.9861 985.2139
CC051/TauUncJ m 1457.83 80.9459 1617.3834 1298.2766
CC068/TauUncJ f 351.5934 114.4748 577.236 125.9508
CC068/TauUncJ m 927.775 90.5003 1106.1611 749.3889


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
CC002/UncJ both 1145.3348 66.2394 1275.9001 1014.7696
CC003/UncJ both 1126.57 85.8561 1295.8019 957.3381
CC004/TauUncJ both 1618.8938 63.9934 1745.0318 1492.7557
CC006/TauUncJ both 132.5754 78.3755 287.0623 -21.9115
CC009/UncJ both 643.635 63.9934 769.773 517.497
CC013/GeniUncJ both 57.1114 78.3755 211.5983 -97.3755
CC017/UncJ both 772.7467 77.4998 925.5074 619.9859
CC018/UncJ both 1012.4562 63.9934 1138.5943 886.3182
CC019/TauUncJ both 426.7771 63.9934 552.9151 300.639
CC024/GeniUncJ both 1145.2679 66.2394 1275.8331 1014.7026
CC025/GeniUncJ both 94.0549 66.0921 224.3297 -36.2199
CC026/GeniUncJ both 496.2625 63.9934 622.4005 370.1245
CC032/GeniUncJ both 453.2 63.9934 579.338 327.062
CC040/TauUncJ both 57.9435 66.2394 188.5087 -72.6218
CC041/TauUncJ both 722.9312 63.9934 849.0693 596.7932
CC051/TauUncJ both 1310.715 60.7094 1430.38 1191.05
CC068/TauUncJ both 639.6842 72.9637 783.5037 495.8647




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA