Project measure / variable:   JaxCC1   ASR_BN

ID, description, units MPD:89061   ASR_BN   average acoustic startle response (ASR) evoked by background noise   [amplitude]  
Data set, strains JaxCC1   CC   18 strains     sex: both     age: 9-11wks
Procedure acoustic startle test
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  STRAIN COMPARISON PLOT
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JaxCC1 - average acoustic startle response (ASR) evoked by background noise



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested18 strains17 strains
Mean of the strain means16.407   amplitude 19.282   amplitude
Median of the strain means14.052   amplitude 17.976   amplitude
SD of the strain means± 6.3809 ± 6.2967
Coefficient of variation (CV)0.3889 0.3266
Min–max range of strain means10.309   –   33.625   amplitude 11.812   –   33.917   amplitude
Mean sample size per strain7.0   mice 7.5   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 428.0324 428.0324 7.0278 0.0086
strain 16 7166.705 447.9191 7.3543 < 0.0001
sex:strain 16 944.0424 59.0026 0.9687 0.4921
Residuals 214 13033.8774 60.906


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
CC002/UncJ f 28.521 11.864   8 4.1944 0.416 15.5, 48.167 1.9
CC002/UncJ m 26.881 7.4136   7 2.8021 0.2758 19.0, 37.5 1.21
CC003/UncJ f 16.433 9.8548   5 4.4072 0.5997 6.6667, 31.833 0.0
CC003/UncJ m 18.375 7.4702   4 3.7351 0.4065 7.5, 24.5 -0.14
CC004/TauUncJ f 16.187 3.4919   8 1.2346 0.2157 12.333, 22.833 -0.03
CC004/TauUncJ m 17.354 4.5123   8 1.5953 0.26 13.167, 26.0 -0.31
CC006/TauUncJ f 33.625 7.8258   4 3.9129 0.2327 22.167, 39.833 2.7
CC006/TauUncJ m 30.021 11.495   8 4.064 0.3829 17.167, 48.0 1.71
CC009/UncJ f 13.542 3.0195   8 1.0675 0.223 9.1667, 18.167 -0.45
CC009/UncJ m 23.75 7.3109   8 2.5848 0.3078 15.667, 39.833 0.71
CC010/GeniUncJ f 12.267 2.8494   5 1.2743 0.2323 10.0, 16.333 -0.65
CC013/GeniUncJ f 24.625 13.99   8 4.9461 0.5681 10.0, 49.667 1.29
CC013/GeniUncJ m 33.917 22.414   4 11.207 0.6608 14.167, 66.0 2.32
CC017/UncJ f 19.139 9.195   6 3.7538 0.4804 10.0, 33.333 0.43
CC017/UncJ m 13.233 2.4168   5 1.0808 0.1826 10.0, 15.833 -0.96
CC018/UncJ f 13.979 8.3179   8 2.9408 0.595 7.5, 33.667 -0.38
CC018/UncJ m 14.375 4.3858   8 1.5506 0.3051 5.8333, 19.833 -0.78
CC019/TauUncJ f 14.125 5.3183   8 1.8803 0.3765 6.6667, 22.167 -0.36
CC019/TauUncJ m 19.417 6.5968   8 2.3323 0.3397 8.3333, 29.167 0.02
CC024/GeniUncJ f 10.309 3.8627   7 1.46 0.3747 5.8333, 16.5 -0.96
CC024/GeniUncJ m 11.812 4.2253   8 1.4939 0.3577 6.6667, 17.167 -1.19
CC025/GeniUncJ f 16.305 4.0017   6 1.6337 0.2454 10.667, 22.833 -0.02
CC025/GeniUncJ m 18.517 16.239   10 5.1354 0.877 6.6667, 62.0 -0.12
CC026/GeniUncJ f 11.604 2.1379   8 0.75587 0.1842 8.3333, 14.0 -0.75
CC026/GeniUncJ m 14.375 4.5684   8 1.6152 0.3178 9.1667, 23.833 -0.78
CC032/GeniUncJ f 16.167 7.6981   8 2.7217 0.4762 9.1667, 33.333 -0.04
CC032/GeniUncJ m 23.313 8.1316   8 2.8749 0.3488 12.5, 37.667 0.64
CC040/TauUncJ f 12.313 4.8881   8 1.7282 0.397 7.5, 22.167 -0.64
CC040/TauUncJ m 17.976 7.0206   7 2.6535 0.3906 6.6667, 27.833 -0.21
CC041/TauUncJ f 13.542 3.885   8 1.3735 0.2869 9.1667, 20.333 -0.45
CC041/TauUncJ m 13.5 2.8758   8 1.0167 0.213 8.3333, 18.167 -0.92
CC051/TauUncJ f 11.813 5.3114   8 1.8779 0.4496 5.0, 22.167 -0.72
CC051/TauUncJ m 16.317 4.8096   10 1.5209 0.2948 10.0, 24.667 -0.47
CC068/TauUncJ f 10.833 3.5843   5 1.6029 0.3309 6.6667, 15.0 -0.87
CC068/TauUncJ m 14.667 4.4132   8 1.5603 0.3009 7.5, 20.5 -0.73


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
CC002/UncJ f 28.521 2.7592 33.9597 23.0823
CC002/UncJ m 26.8809 2.9497 32.6951 21.0666
CC003/UncJ f 16.4333 3.4902 23.3128 9.5539
CC003/UncJ m 18.375 3.9021 26.0665 10.6835
CC004/TauUncJ f 16.1874 2.7592 21.6261 10.7487
CC004/TauUncJ m 17.3543 2.7592 22.793 11.9155
CC006/TauUncJ f 33.625 3.9021 41.3165 25.9335
CC006/TauUncJ m 30.0208 2.7592 35.4595 24.582
CC009/UncJ f 13.5417 2.7592 18.9804 8.103
CC009/UncJ m 23.75 2.7592 29.1887 18.3113
CC013/GeniUncJ f 24.625 2.7592 30.0637 19.1863
CC013/GeniUncJ m 33.9168 3.9021 41.6083 26.2252
CC017/UncJ f 19.139 3.1861 25.4191 12.8589
CC017/UncJ m 13.2332 3.4902 20.1127 6.3537
CC018/UncJ f 13.9793 2.7592 19.418 8.5406
CC018/UncJ m 14.3749 2.7592 19.8136 8.9362
CC019/TauUncJ f 14.1251 2.7592 19.5638 8.6864
CC019/TauUncJ m 19.4167 2.7592 24.8554 13.978
CC024/GeniUncJ f 10.3095 2.9497 16.1237 4.4952
CC024/GeniUncJ m 11.8124 2.7592 17.2511 6.3737
CC025/GeniUncJ f 16.3055 3.1861 22.5856 10.0254
CC025/GeniUncJ m 18.5167 2.4679 23.3812 13.6521
CC026/GeniUncJ f 11.6041 2.7592 17.0428 6.1654
CC026/GeniUncJ m 14.3748 2.7592 19.8135 8.9361
CC032/GeniUncJ f 16.1666 2.7592 21.6053 10.7279
CC032/GeniUncJ m 23.3126 2.7592 28.7513 17.8739
CC040/TauUncJ f 12.3125 2.7592 17.7512 6.8738
CC040/TauUncJ m 17.976 2.9497 23.7902 12.1617
CC041/TauUncJ f 13.5417 2.7592 18.9804 8.103
CC041/TauUncJ m 13.5 2.7592 18.9387 8.0613
CC051/TauUncJ f 11.8125 2.7592 17.2512 6.3738
CC051/TauUncJ m 16.3167 2.4679 21.1812 11.4522
CC068/TauUncJ f 10.8333 3.4902 17.7128 3.9539
CC068/TauUncJ m 14.6666 2.7592 20.1053 9.2279


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
CC002/UncJ both 27.7009 2.0195 31.6817 23.7202
CC003/UncJ both 17.4042 2.6176 22.5638 12.2446
CC004/TauUncJ both 16.7708 1.9511 20.6166 12.9251
CC006/TauUncJ both 31.8229 2.3895 36.5329 27.1128
CC009/UncJ both 18.6458 1.9511 22.4916 14.8001
CC013/GeniUncJ both 29.2709 2.3895 33.9809 24.5608
CC017/UncJ both 16.1861 2.3628 20.8435 11.5287
CC018/UncJ both 14.1771 1.9511 18.0229 10.3314
CC019/TauUncJ both 16.7709 1.9511 20.6166 12.9251
CC024/GeniUncJ both 11.0609 2.0195 15.0417 7.0802
CC025/GeniUncJ both 17.4111 2.015 21.383 13.4392
CC026/GeniUncJ both 12.9895 1.9511 16.8352 9.1437
CC032/GeniUncJ both 19.7396 1.9511 23.5854 15.8939
CC040/TauUncJ both 15.1442 2.0195 19.125 11.1635
CC041/TauUncJ both 13.5209 1.9511 17.3666 9.6751
CC051/TauUncJ both 14.0646 1.8509 17.713 10.4162
CC068/TauUncJ both 12.75 2.2245 17.1348 8.3652




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA