Phenotype measure:   Neuner1   epm_open_time_6mo

ID, description, units MPD:65960   epm_open_time_6mo   percentage of time spent in open arms of elevated plus maze, 6 min test   [%]  6 mo
Data set, strains Neuner1   F1 AD-BXD   55 strains     sex: both     age: 23-57wks
Procedure elevated plus maze
Ontology mappings

  STRAIN COMPARISON PLOT
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Neuner1 - percentage of time spent in open arms of elevated plus maze, 6 min test 6 mo



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested54 strains33 strains
Mean of the strain means12.404   % 13.243   %
Median of the strain means11.873   % 10.375   %
SD of the strain means± 6.5745 ± 8.2381
Coefficient of variation (CV)0.5301 0.6221
Min–max range of strain means0.5   –   26.778   % 3.8333   –   38.333   %
Mean sample size per strain6.5   mice 4.6   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 86.0827 86.0827 0.6214 0.4312
strain 28 8521.2319 304.3297 2.1969 0.0007
sex:strain 28 4680.1902 167.1497 1.2066 0.2227
Residuals 287 39758.0487 138.5298


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
(B6.5XFAD x B6)F1-ADtg f 24.143 32.163   7 12.157 1.3322 2.0, 94.0 1.79
(B6.5XFAD x B6)F1-ADtg m 20.167 20.43   6 8.3403 1.013 4.0, 60.0 0.84
(B6.5XFAD x B6)F1-Ntg f 7.9091 11.588   11 3.494 1.4652 -0.68
(B6.5XFAD x B6)F1-Ntg m 16.25 9.3229   4 4.6615 0.5737 10.0, 30.0 0.36
(B6.5XFAD x BXD100)F1-ADtg f 14.167 12.576   6 5.1343 0.8877 1.0, 28.0 0.27
(B6.5XFAD x BXD100)F1-ADtg m 22.625 21.948   8 7.7596 0.9701 4.0, 65.0 1.14
(B6.5XFAD x BXD100)F1-Ntg f 9.8333 7.9603   6 3.2498 0.8095 2.0, 23.0 -0.39
(B6.5XFAD x BXD100)F1-Ntg m 6.6 4.8785   5 2.1817 0.7392 2.0, 14.0 -0.81
(B6.5XFAD x BXD14)F1-ADtg f 26.222 18.295   9 6.0982 0.6977 6.0, 60.0 2.1
(B6.5XFAD x BXD14)F1-Ntg f 7.5 6.1373   4 3.0687 0.8183 -0.75
(B6.5XFAD x BXD16)F1-ADtg f 15.125 16.234   8 5.7397 1.0733 0.41
(B6.5XFAD x BXD22)F1-ADtg f 16.4 17.286   5 7.7305 1.054 4.0, 43.0 0.61
(B6.5XFAD x BXD22)F1-Ntg f 3.5 3.6968   4 1.8484 1.0562 1.0, 9.0 -1.35
(B6.5XFAD x BXD2)F1-ADtg f 19.0 13.213   8 4.6713 0.6954 6.0, 46.0 1.0
(B6.5XFAD x BXD2)F1-Ntg f 11.286 4.3095   7 1.6288 0.3819 8.0, 20.0 -0.17
(B6.5XFAD x BXD32)F1-ADtg f 14.625 8.4505   8 2.9877 0.5778 0.34
(B6.5XFAD x BXD32)F1-ADtg m 19.0 11.225   6 4.5826 0.5908 0.7
(B6.5XFAD x BXD32)F1-Ntg f 6.5 2.6458   4 1.3229 0.407 3.0, 9.0 -0.9
(B6.5XFAD x BXD32)F1-Ntg m 13.0 8.756   4 4.378 0.6735 2.0, 21.0 -0.03
(B6.5XFAD x BXD34)F1-ADtg f 26.778 37.712   9 12.571 1.4083 2.19
(B6.5XFAD x BXD34)F1-Ntg f 9.4545 7.0195   11 2.1164 0.7424 -0.45
(B6.5XFAD x BXD42)F1-ADtg f 20.111 11.921   9 3.9737 0.5928 7.0, 34.0 1.17
(B6.5XFAD x BXD42)F1-Ntg f 11.8 10.918   5 4.8826 0.9252 -0.09
(B6.5XFAD x BXD44)F1-ADtg f 8.7273 4.7348   11 1.4276 0.5425 1.0, 16.0 -0.56
(B6.5XFAD x BXD44)F1-ADtg m 5.5 3.0822   6 1.2583 0.5604 -0.94
(B6.5XFAD x BXD44)F1-Ntg f 9.5 7.7782   2   5.5 0.8188 4.0, 15.0 -0.44
(B6.5XFAD x BXD44)F1-Ntg m 7.5 9.1924   2   6.5 1.2257 1.0, 14.0 -0.7
(B6.5XFAD x BXD51)F1-ADtg f 20.778 19.575   9 6.5251 0.9421 1.27
(B6.5XFAD x BXD51)F1-Ntg f 10.714 6.8972   7 2.6069 0.6437 1.0, 22.0 -0.26
(B6.5XFAD x BXD55)F1-ADtg f 21.571 14.397   7 5.4417 0.6674 5.0, 47.0 1.39
(B6.5XFAD x BXD55)F1-Ntg f 7.3333 7.6855   6 3.1376 1.048 -0.77
(B6.5XFAD x BXD56)F1-ADtg f 11.0 15.556   2   11.0 1.4142 -0.21
(B6.5XFAD x BXD56)F1-ADtg m 38.333 29.569   3 17.072 0.7714 6.0, 64.0 3.05
(B6.5XFAD x BXD56)F1-Ntg f 4.4 3.9749   5 1.7776 0.9034 1.0, 11.0 -1.22
(B6.5XFAD x BXD56)F1-Ntg m 27.0 0.0   1   0.0 0.0 27.0, 27.0 1.67
(B6.5XFAD x BXD60)F1-ADtg f 24.2 25.312   5 11.32 1.046 9.0, 69.0 1.79
(B6.5XFAD x BXD60)F1-ADtg m 8.2 7.0852   5 3.1686 0.864 1.0, 18.0 -0.61
(B6.5XFAD x BXD60)F1-Ntg f 15.25 12.971   4 6.4856 0.8506 3.0, 33.0 0.43
(B6.5XFAD x BXD61)F1-ADtg f 13.167 11.771   6 4.8057 0.894 2.0, 34.0 0.12
(B6.5XFAD x BXD61)F1-ADtg m 12.25 13.72   4 6.8602 1.12 2.0, 31.0 -0.12
(B6.5XFAD x BXD61)F1-Ntg f 2.3333 2.5166   3 1.453 1.0785 -1.53
(B6.5XFAD x BXD61)F1-Ntg m 11.0 7.1647   4 3.5824 0.6513 1.0, 18.0 -0.27
(B6.5XFAD x BXD62)F1-ADtg f 18.0 0.0   1   0.0 0.0 18.0, 18.0 0.85
(B6.5XFAD x BXD62)F1-ADtg m 27.75 43.706   4 21.853 1.575 1.76
(B6.5XFAD x BXD62)F1-Ntg f 9.0 9.5394   3 5.5076 1.0599 3.0, 20.0 -0.52
(B6.5XFAD x BXD62)F1-Ntg m 10.25 15.305   4 7.6526 1.4932 -0.36
(B6.5XFAD x BXD65)F1-ADtg f 12.0 8.4853   10 2.6833 0.7071 3.0, 28.0 -0.06
(B6.5XFAD x BXD65)F1-ADtg m 4.25 5.3151   4 2.6575 1.2506 -1.09
(B6.5XFAD x BXD65)F1-Ntg f 9.8889 8.767   9 2.9223 0.8866 -0.38
(B6.5XFAD x BXD65)F1-Ntg m 7.6667 8.2865   6 3.383 1.0809 -0.68
(B6.5XFAD x BXD66)F1-ADtg f 16.667 10.263   3 5.9255 0.6158 8.0, 28.0 0.65
(B6.5XFAD x BXD66)F1-ADtg m 9.8889 7.5406   9 2.5135 0.7625 -0.41
(B6.5XFAD x BXD66)F1-Ntg f 16.0 0.0   1   0.0 0.0 16.0, 16.0 0.55
(B6.5XFAD x BXD66)F1-Ntg m 8.4 4.2778   5 1.9131 0.5093 3.0, 14.0 -0.59
(B6.5XFAD x BXD68)F1-ADtg f 16.111 9.4133   9 3.1378 0.5843 3.0, 29.0 0.56
(B6.5XFAD x BXD68)F1-ADtg m 12.625 9.913   8 3.5048 0.7852 3.0, 28.0 -0.08
(B6.5XFAD x BXD68)F1-Ntg f 11.947 12.371   19 2.8382 1.0355 -0.07
(B6.5XFAD x BXD68)F1-Ntg m 10.0 7.3485   4 3.6742 0.7348 -0.39
(B6.5XFAD x BXD69)F1-ADtg f 12.0 10.08   6 4.115 0.84 -0.06
(B6.5XFAD x BXD69)F1-ADtg m 13.0 6.1644   4 3.0822 0.4742 4.0, 18.0 -0.03
(B6.5XFAD x BXD69)F1-Ntg f 15.5 16.263   2   11.5 1.0493 4.0, 27.0 0.47
(B6.5XFAD x BXD69)F1-Ntg m 6.5 4.4347   4 2.2174 0.6823 2.0, 12.0 -0.82
(B6.5XFAD x BXD70)F1-ADtg f 5.0 0.0   1   0.0 0.0 5.0, 5.0 -1.13
(B6.5XFAD x BXD70)F1-Ntg f 3.0 0.0   1   0.0 0.0 3.0, 3.0 -1.43
(B6.5XFAD x BXD75)F1-ADtg f 11.0 9.8851   8 3.4949 0.8986 -0.21
(B6.5XFAD x BXD75)F1-ADtg m 30.167 20.508   6 8.3722 0.6798 4.0, 57.0 2.05
(B6.5XFAD x BXD75)F1-Ntg f 9.1111 6.3727   9 2.1242 0.6994 -0.5
(B6.5XFAD x BXD75)F1-Ntg m 12.0 11.314   2   8.0 0.9428 4.0, 20.0 -0.15
(B6.5XFAD x BXD77)F1-ADtg f 25.5 19.092   2   13.5 0.7487 12.0, 39.0 1.99
(B6.5XFAD x BXD77)F1-ADtg m 18.5 14.849   2   10.5 0.8027 8.0, 29.0 0.64
(B6.5XFAD x BXD77)F1-Ntg f 12.0 6.1644   5 2.7568 0.5137 2.0, 17.0 -0.06
(B6.5XFAD x BXD77)F1-Ntg m 6.4 4.4497   5 1.99 0.6953 1.0, 11.0 -0.83
(B6.5XFAD x BXD81)F1-ADtg f 13.25 15.493   12 4.4723 1.1693 0.13
(B6.5XFAD x BXD81)F1-Ntg f 6.375 4.0686   8 1.4385 0.6382 -0.92
(B6.5XFAD x BXD87)F1-ADtg f 17.583 13.827   12 3.9914 0.7863 2.0, 53.0 0.79
(B6.5XFAD x BXD87)F1-ADtg m 9.0 5.5227   5 2.4698 0.6136 2.0, 16.0 -0.52
(B6.5XFAD x BXD87)F1-Ntg f 3.3333 4.4572   6 1.8196 1.3372 -1.38
(B6.5XFAD x BXD87)F1-Ntg m 4.5 3.873   4 1.9365 0.8607 -1.06
(B6.5XFAD x BXD89)F1-ADtg m 16.0 0.0   1   0.0 0.0 16.0, 16.0 0.33
(B6.5XFAD x BXD89)F1-Ntg f 0.5 0.70711   2   0.5 1.4142 -1.81
(B6.5XFAD x BXD89)F1-Ntg m 8.5 2.1213   2   1.5 0.2496 7.0, 10.0 -0.58
(B6.5XFAD x BXD99)F1-ADtg f 3.0 3.8297   4 1.9149 1.2766 -1.43
(B6.5XFAD x BXD99)F1-Ntg f 18.0 0.0   1   0.0 0.0 18.0, 18.0 0.85
(B6.5XFAD x D2)F1-ADtg f 6.3125 8.5846   16 2.1462 1.3599 -0.93
(B6.5XFAD x D2)F1-ADtg m 10.375 9.1798   8 3.2455 0.8848 -0.35
(B6.5XFAD x D2)F1-Ntg f 5.3846 6.6776   13 1.852 1.2401 -1.07
(B6.5XFAD x D2)F1-Ntg m 3.8333 5.4559   6 2.2274 1.4233 -1.14


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
(B6.5XFAD x B6)F1-ADtg f 24.1429 4.4486 32.8989 15.3869
(B6.5XFAD x B6)F1-ADtg m 20.1667 4.805 29.6242 10.7091
(B6.5XFAD x B6)F1-Ntg f 7.9091 3.5487 14.894 0.9242
(B6.5XFAD x B6)F1-Ntg m 16.25 5.8849 27.8331 4.6669
(B6.5XFAD x BXD100)F1-ADtg f 14.1667 4.805 23.6242 4.7091
(B6.5XFAD x BXD100)F1-ADtg m 22.625 4.1613 30.8155 14.4345
(B6.5XFAD x BXD100)F1-Ntg f 9.8333 4.805 19.2909 0.3758
(B6.5XFAD x BXD100)F1-Ntg m 6.6 5.2636 16.9602 -3.7602
(B6.5XFAD x BXD32)F1-ADtg f 14.625 4.1613 22.8155 6.4345
(B6.5XFAD x BXD32)F1-ADtg m 19.0 4.805 28.4576 9.5424
(B6.5XFAD x BXD32)F1-Ntg f 6.5 5.8849 18.0831 -5.0831
(B6.5XFAD x BXD32)F1-Ntg m 13.0 5.8849 24.5831 1.4169
(B6.5XFAD x BXD44)F1-ADtg f 8.7273 3.5487 15.7121 1.7424
(B6.5XFAD x BXD44)F1-ADtg m 5.5 4.805 14.9576 -3.9576
(B6.5XFAD x BXD44)F1-Ntg f 9.5 8.3226 25.881 -6.881
(B6.5XFAD x BXD44)F1-Ntg m 7.5 8.3226 23.881 -8.881
(B6.5XFAD x BXD56)F1-ADtg f 11.0 8.3226 27.381 -5.381
(B6.5XFAD x BXD56)F1-ADtg m 38.3333 6.7953 51.7083 24.9583
(B6.5XFAD x BXD60)F1-ADtg f 24.2 5.2636 34.5602 13.8398
(B6.5XFAD x BXD60)F1-ADtg m 8.2 5.2636 18.5602 -2.1602
(B6.5XFAD x BXD61)F1-ADtg f 13.1667 4.805 22.6242 3.7091
(B6.5XFAD x BXD61)F1-ADtg m 12.25 5.8849 23.8331 0.6669
(B6.5XFAD x BXD61)F1-Ntg f 2.3333 6.7953 15.7083 -11.0417
(B6.5XFAD x BXD61)F1-Ntg m 11.0 5.8849 22.5831 -0.5831
(B6.5XFAD x BXD62)F1-Ntg f 9.0 6.7953 22.375 -4.375
(B6.5XFAD x BXD62)F1-Ntg m 10.25 5.8849 21.8331 -1.3331
(B6.5XFAD x BXD65)F1-ADtg f 12.0 3.722 19.3258 4.6742
(B6.5XFAD x BXD65)F1-ADtg m 4.25 5.8849 15.8331 -7.3331
(B6.5XFAD x BXD65)F1-Ntg f 9.8889 3.9233 17.611 2.1668
(B6.5XFAD x BXD65)F1-Ntg m 7.6667 4.805 17.1242 -1.7909
(B6.5XFAD x BXD66)F1-ADtg f 16.6667 6.7953 30.0417 3.2917
(B6.5XFAD x BXD66)F1-ADtg m 9.8889 3.9233 17.611 2.1668
(B6.5XFAD x BXD68)F1-ADtg f 16.1111 3.9233 23.8332 8.389
(B6.5XFAD x BXD68)F1-ADtg m 12.625 4.1613 20.8155 4.4345
(B6.5XFAD x BXD68)F1-Ntg f 11.9474 2.7002 17.2621 6.6327
(B6.5XFAD x BXD68)F1-Ntg m 10.0 5.8849 21.5831 -1.5831
(B6.5XFAD x BXD69)F1-ADtg f 12.0 4.805 21.4576 2.5424
(B6.5XFAD x BXD69)F1-ADtg m 13.0 5.8849 24.5831 1.4169
(B6.5XFAD x BXD69)F1-Ntg f 15.5 8.3226 31.881 -0.881
(B6.5XFAD x BXD69)F1-Ntg m 6.5 5.8849 18.0831 -5.0831
(B6.5XFAD x BXD75)F1-ADtg f 11.0 4.1613 19.1905 2.8095
(B6.5XFAD x BXD75)F1-ADtg m 30.1667 4.805 39.6242 20.7091
(B6.5XFAD x BXD75)F1-Ntg f 9.1111 3.9233 16.8332 1.389
(B6.5XFAD x BXD75)F1-Ntg m 12.0 8.3226 28.381 -4.381
(B6.5XFAD x BXD77)F1-ADtg f 25.5 8.3226 41.881 9.119
(B6.5XFAD x BXD77)F1-ADtg m 18.5 8.3226 34.881 2.119
(B6.5XFAD x BXD77)F1-Ntg f 12.0 5.2636 22.3602 1.6398
(B6.5XFAD x BXD77)F1-Ntg m 6.4 5.2636 16.7602 -3.9602
(B6.5XFAD x BXD87)F1-ADtg f 17.5833 3.3977 24.2708 10.8958
(B6.5XFAD x BXD87)F1-ADtg m 9.0 5.2636 19.3602 -1.3602
(B6.5XFAD x BXD87)F1-Ntg f 3.3333 4.805 12.7909 -6.1242
(B6.5XFAD x BXD87)F1-Ntg m 4.5 5.8849 16.0831 -7.0831
(B6.5XFAD x BXD89)F1-Ntg f 0.5 8.3226 16.881 -15.881
(B6.5XFAD x BXD89)F1-Ntg m 8.5 8.3226 24.881 -7.881
(B6.5XFAD x D2)F1-ADtg f 6.3125 2.9425 12.1041 0.5209
(B6.5XFAD x D2)F1-ADtg m 10.375 4.1613 18.5655 2.1845
(B6.5XFAD x D2)F1-Ntg f 5.3846 3.2644 11.8098 -1.0405
(B6.5XFAD x D2)F1-Ntg m 3.8333 4.805 13.2909 -5.6242


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
(B6.5XFAD x B6)F1-ADtg both 22.1548 3.2741 28.599 15.7105
(B6.5XFAD x B6)F1-Ntg both 12.0795 3.4361 18.8426 5.3165
(B6.5XFAD x BXD100)F1-ADtg both 18.3958 3.1782 24.6514 12.1402
(B6.5XFAD x BXD100)F1-Ntg both 8.2167 3.5635 15.2306 1.2027
(B6.5XFAD x BXD32)F1-ADtg both 16.8125 3.1782 23.0681 10.5569
(B6.5XFAD x BXD32)F1-Ntg both 9.75 4.1613 17.9405 1.5595
(B6.5XFAD x BXD44)F1-ADtg both 7.1136 2.9867 12.9923 1.235
(B6.5XFAD x BXD44)F1-Ntg both 8.5 5.8849 20.0831 -3.0831
(B6.5XFAD x BXD56)F1-ADtg both 24.6667 5.3722 35.2405 14.0928
(B6.5XFAD x BXD60)F1-ADtg both 16.2 3.722 23.5258 8.8742
(B6.5XFAD x BXD61)F1-ADtg both 12.7083 3.7987 20.1852 5.2315
(B6.5XFAD x BXD61)F1-Ntg both 6.6667 4.4947 15.5134 -2.1801
(B6.5XFAD x BXD62)F1-Ntg both 9.625 4.4947 18.4717 0.7783
(B6.5XFAD x BXD65)F1-ADtg both 8.125 3.4816 14.9777 1.2723
(B6.5XFAD x BXD65)F1-Ntg both 8.7778 3.1016 14.8826 2.6729
(B6.5XFAD x BXD66)F1-ADtg both 13.2778 3.9233 20.9998 5.5557
(B6.5XFAD x BXD68)F1-ADtg both 14.3681 2.8596 19.9964 8.7397
(B6.5XFAD x BXD68)F1-Ntg both 10.9737 3.2374 17.3458 4.6016
(B6.5XFAD x BXD69)F1-ADtg both 12.5 3.7987 19.9769 5.0231
(B6.5XFAD x BXD69)F1-Ntg both 11.0 5.0965 21.0313 0.9687
(B6.5XFAD x BXD75)F1-ADtg both 20.5833 3.1782 26.8389 14.3277
(B6.5XFAD x BXD75)F1-Ntg both 10.5556 4.6005 19.6105 1.5006
(B6.5XFAD x BXD77)F1-ADtg both 22.0 5.8849 33.5831 10.4169
(B6.5XFAD x BXD77)F1-Ntg both 9.2 3.722 16.5258 1.8742
(B6.5XFAD x BXD87)F1-ADtg both 13.2917 3.1325 19.4572 7.1261
(B6.5XFAD x BXD87)F1-Ntg both 3.9167 3.7987 11.3935 -3.5602
(B6.5XFAD x BXD89)F1-Ntg both 4.5 5.8849 16.0831 -7.0831
(B6.5XFAD x D2)F1-ADtg both 8.3438 2.5483 13.3594 3.3281
(B6.5XFAD x D2)F1-Ntg both 4.609 2.9045 10.3258 -1.1078




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA