Phenotype measure:   Neuner1   epm_open_ent_6mo

ID, description, units MPD:65958   epm_open_ent_6mo   percentage of entries into open arms in elevated plus maze, 6 min test   [%]  6 mo
Data set, strains Neuner1   F1 AD-BXD   55 strains     sex: both     age: 23-57wks
Procedure elevated plus maze
Ontology mappings

  STRAIN COMPARISON PLOT
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Neuner1 - percentage of entries into open arms in elevated plus maze, 6 min test 6 mo



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested54 strains33 strains
Mean of the strain means27.865   % 26.848   %
Median of the strain means28.434   % 26.0   %
SD of the strain means± 9.4662 ± 7.4292
Coefficient of variation (CV)0.3397 0.2767
Min–max range of strain means3.0   –   50.0   % 11.167   –   47.0   %
Mean sample size per strain6.5   mice 4.6   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 0.0036 0.0036 0.0 0.9967
strain 28 15279.0188 545.6792 2.5836 < 0.0001
sex:strain 28 5654.2724 201.9383 0.9561 0.5326
Residuals 287 60616.7457 211.2082


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
(B6.5XFAD x B6)F1-ADtg f 32.0 12.974   7 4.9038 0.4054 17.0, 50.0 0.44
(B6.5XFAD x B6)F1-ADtg m 26.833 14.77   6 6.03 0.5505 6.0, 50.0 0.0
(B6.5XFAD x B6)F1-Ntg f 17.909 14.896   11 4.4913 0.8318 -1.05
(B6.5XFAD x B6)F1-Ntg m 32.75 14.431   4 7.2154 0.4406 17.0, 52.0 0.79
(B6.5XFAD x BXD100)F1-ADtg f 34.333 12.209   6 4.9844 0.3556 20.0, 50.0 0.68
(B6.5XFAD x BXD100)F1-ADtg m 35.25 13.047   8 4.6127 0.3701 20.0, 57.0 1.13
(B6.5XFAD x BXD100)F1-Ntg f 31.667 18.228   6 7.4416 0.5756 10.0, 63.0 0.4
(B6.5XFAD x BXD100)F1-Ntg m 25.0 8.775   5 3.9243 0.351 18.0, 40.0 -0.25
(B6.5XFAD x BXD14)F1-ADtg f 37.111 10.845   9 3.615 0.2922 20.0, 56.0 0.98
(B6.5XFAD x BXD14)F1-Ntg f 20.25 14.728   4 7.364 0.7273 -0.8
(B6.5XFAD x BXD16)F1-ADtg f 28.0 20.949   8 7.4066 0.7482 0.01
(B6.5XFAD x BXD22)F1-ADtg f 32.0 6.1644   5 2.7568 0.1926 25.0, 41.0 0.44
(B6.5XFAD x BXD22)F1-Ntg f 12.25 3.594   4 1.797 0.2934 9.0, 17.0 -1.65
(B6.5XFAD x BXD2)F1-ADtg f 36.5 9.3656   8 3.3112 0.2566 17.0, 45.0 0.91
(B6.5XFAD x BXD2)F1-Ntg f 29.286 10.095   7 3.8155 0.3447 15.0, 44.0 0.15
(B6.5XFAD x BXD32)F1-ADtg f 31.375 14.995   8 5.3014 0.4779 0.37
(B6.5XFAD x BXD32)F1-ADtg m 37.5 20.521   6 8.3775 0.5472 1.43
(B6.5XFAD x BXD32)F1-Ntg f 21.0 8.641   4 4.3205 0.4115 13.0, 33.0 -0.73
(B6.5XFAD x BXD32)F1-Ntg m 32.25 11.295   4 5.6476 0.3502 22.0, 47.0 0.73
(B6.5XFAD x BXD34)F1-ADtg f 28.778 18.767   9 6.2556 0.6521 0.1
(B6.5XFAD x BXD34)F1-Ntg f 20.455 10.549   11 3.1805 0.5157 -0.78
(B6.5XFAD x BXD42)F1-ADtg f 35.222 11.211   9 3.7371 0.3183 20.0, 50.0 0.78
(B6.5XFAD x BXD42)F1-Ntg f 24.0 17.635   5 7.8867 0.7348 -0.41
(B6.5XFAD x BXD44)F1-ADtg f 28.091 10.653   11 3.2121 0.3792 6.0, 40.0 0.02
(B6.5XFAD x BXD44)F1-ADtg m 18.833 14.359   6 5.8618 0.7624 -1.08
(B6.5XFAD x BXD44)F1-Ntg f 27.0 1.4142   2   1.0 0.0524 26.0, 28.0 -0.09
(B6.5XFAD x BXD44)F1-Ntg m 18.0 5.6569   2   4.0 0.3143 14.0, 22.0 -1.19
(B6.5XFAD x BXD51)F1-ADtg f 41.333 29.462   9 9.8206 0.7128 1.42
(B6.5XFAD x BXD51)F1-Ntg f 26.714 11.056   7 4.1788 0.4139 14.0, 44.0 -0.12
(B6.5XFAD x BXD55)F1-ADtg f 34.0 13.82   7 5.2236 0.4065 8.0, 50.0 0.65
(B6.5XFAD x BXD55)F1-Ntg f 21.333 16.609   6 6.7807 0.7786 -0.69
(B6.5XFAD x BXD56)F1-ADtg f 17.5 24.749   2   17.5 1.4142 -1.09
(B6.5XFAD x BXD56)F1-ADtg m 36.0 15.1   3 8.7178 0.4194 20.0, 50.0 1.23
(B6.5XFAD x BXD56)F1-Ntg f 24.8 19.766   5 8.8397 0.797 6.0, 50.0 -0.32
(B6.5XFAD x BXD56)F1-Ntg m 25.0 0.0   1   0.0 0.0 25.0, 25.0 -0.25
(B6.5XFAD x BXD60)F1-ADtg f 41.2 19.627   5 8.7772 0.4764 25.0, 75.0 1.41
(B6.5XFAD x BXD60)F1-ADtg m 29.2 17.838   5 7.9775 0.6109 13.0, 55.0 0.32
(B6.5XFAD x BXD60)F1-Ntg f 36.75 15.392   4 7.696 0.4188 18.0, 54.0 0.94
(B6.5XFAD x BXD61)F1-ADtg f 41.333 18.511   6 7.5572 0.4479 22.0, 67.0 1.42
(B6.5XFAD x BXD61)F1-ADtg m 28.75 16.701   4 8.3504 0.5809 11.0, 43.0 0.26
(B6.5XFAD x BXD61)F1-Ntg f 14.667 14.503   3 8.3732 0.9888 -1.39
(B6.5XFAD x BXD61)F1-Ntg m 28.25 5.6789   4 2.8395 0.201 20.0, 33.0 0.19
(B6.5XFAD x BXD62)F1-ADtg f 27.0 0.0   1   0.0 0.0 27.0, 27.0 -0.09
(B6.5XFAD x BXD62)F1-ADtg m 35.25 44.252   4 22.126 1.2554 1.13
(B6.5XFAD x BXD62)F1-Ntg f 29.667 10.408   3 6.0093 0.3508 18.0, 38.0 0.19
(B6.5XFAD x BXD62)F1-Ntg m 31.0 25.02   4 12.51 0.8071 14.0, 67.0 0.56
(B6.5XFAD x BXD65)F1-ADtg f 31.4 15.45   10 4.8858 0.492 15.0, 67.0 0.37
(B6.5XFAD x BXD65)F1-ADtg m 17.25 15.196   4 7.598 0.8809 -1.29
(B6.5XFAD x BXD65)F1-Ntg f 29.333 12.48   9 4.16 0.4255 0.16
(B6.5XFAD x BXD65)F1-Ntg m 18.333 11.725   6 4.7866 0.6395 -1.15
(B6.5XFAD x BXD66)F1-ADtg f 33.667 22.121   3 12.771 0.6571 13.0, 57.0 0.61
(B6.5XFAD x BXD66)F1-ADtg m 25.667 16.363   9 5.4544 0.6375 -0.16
(B6.5XFAD x BXD66)F1-Ntg f 50.0 0.0   1   0.0 0.0 50.0, 50.0 2.34
(B6.5XFAD x BXD66)F1-Ntg m 20.6 3.7148   5 1.6613 0.1803 18.0, 27.0 -0.84
(B6.5XFAD x BXD68)F1-ADtg f 30.111 11.472   9 3.8241 0.381 17.0, 53.0 0.24
(B6.5XFAD x BXD68)F1-ADtg m 26.0 14.162   8 5.0071 0.5447 9.0, 44.0 -0.11
(B6.5XFAD x BXD68)F1-Ntg f 27.105 15.663   19 3.5933 0.5778 -0.08
(B6.5XFAD x BXD68)F1-Ntg m 25.25 19.294   4 9.6469 0.7641 -0.22
(B6.5XFAD x BXD69)F1-ADtg f 25.5 17.886   6 7.3018 0.7014 -0.25
(B6.5XFAD x BXD69)F1-ADtg m 31.75 13.647   4 6.8237 0.4298 17.0, 50.0 0.66
(B6.5XFAD x BXD69)F1-Ntg f 29.0 15.556   2   11.0 0.5364 18.0, 40.0 0.12
(B6.5XFAD x BXD69)F1-Ntg m 18.5 8.544   4 4.272 0.4618 7.0, 25.0 -1.12
(B6.5XFAD x BXD70)F1-ADtg f 40.0 0.0   1   0.0 0.0 40.0, 40.0 1.28
(B6.5XFAD x BXD70)F1-Ntg f 14.0 0.0   1   0.0 0.0 14.0, 14.0 -1.46
(B6.5XFAD x BXD75)F1-ADtg f 27.25 12.349   8 4.3661 0.4532 -0.07
(B6.5XFAD x BXD75)F1-ADtg m 36.167 17.713   6 7.2315 0.4898 16.0, 56.0 1.25
(B6.5XFAD x BXD75)F1-Ntg f 21.778 13.746   9 4.5819 0.6312 -0.64
(B6.5XFAD x BXD75)F1-Ntg m 25.0 11.314   2   8.0 0.4525 17.0, 33.0 -0.25
(B6.5XFAD x BXD77)F1-ADtg f 49.0 15.556   2   11.0 0.3175 38.0, 60.0 2.23
(B6.5XFAD x BXD77)F1-ADtg m 47.0 4.2426   2   3.0 0.0903 44.0, 50.0 2.71
(B6.5XFAD x BXD77)F1-Ntg f 29.8 11.054   5 4.9437 0.371 13.0, 38.0 0.2
(B6.5XFAD x BXD77)F1-Ntg m 23.4 13.428   5 6.005 0.5738 11.0, 42.0 -0.46
(B6.5XFAD x BXD81)F1-ADtg f 20.0 15.232   12 4.397 0.7616 -0.83
(B6.5XFAD x BXD81)F1-Ntg f 27.375 12.66   8 4.4759 0.4625 17.0, 50.0 -0.05
(B6.5XFAD x BXD87)F1-ADtg f 35.333 11.773   12 3.3986 0.3332 20.0, 63.0 0.79
(B6.5XFAD x BXD87)F1-ADtg m 30.4 11.415   5 5.1049 0.3755 17.0, 42.0 0.48
(B6.5XFAD x BXD87)F1-Ntg f 11.667 12.91   6 5.2705 1.1066 -1.71
(B6.5XFAD x BXD87)F1-Ntg m 22.75 20.581   4 10.291 0.9047 -0.55
(B6.5XFAD x BXD89)F1-ADtg m 27.0 0.0   1   0.0 0.0 27.0, 27.0 0.02
(B6.5XFAD x BXD89)F1-Ntg f 3.0 4.2426   2   3.0 1.4142 -2.63
(B6.5XFAD x BXD89)F1-Ntg m 21.5 2.1213   2   1.5 0.0987 20.0, 23.0 -0.72
(B6.5XFAD x BXD99)F1-ADtg f 17.0 16.872   4 8.436 0.9925 -1.15
(B6.5XFAD x BXD99)F1-Ntg f 38.0 0.0   1   0.0 0.0 38.0, 38.0 1.07
(B6.5XFAD x D2)F1-ADtg f 17.5 14.208   16 3.552 0.8119 -1.09
(B6.5XFAD x D2)F1-ADtg m 18.375 11.783   8 4.1659 0.6413 -1.14
(B6.5XFAD x D2)F1-Ntg f 13.385 15.788   13 4.3788 1.1796 -1.53
(B6.5XFAD x D2)F1-Ntg m 11.167 12.828   6 5.2372 1.1488 -2.11


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
(B6.5XFAD x B6)F1-ADtg f 32.0 5.493 42.8116 21.1884
(B6.5XFAD x B6)F1-ADtg m 26.8333 5.9331 38.5112 15.1555
(B6.5XFAD x B6)F1-Ntg f 17.9091 4.3819 26.5338 9.2844
(B6.5XFAD x B6)F1-Ntg m 32.75 7.2665 47.0524 18.4476
(B6.5XFAD x BXD100)F1-ADtg f 34.3333 5.9331 46.0112 22.6555
(B6.5XFAD x BXD100)F1-ADtg m 35.25 5.1382 45.3633 25.1367
(B6.5XFAD x BXD100)F1-Ntg f 31.6667 5.9331 43.3445 19.9888
(B6.5XFAD x BXD100)F1-Ntg m 25.0 6.4994 37.7925 12.2075
(B6.5XFAD x BXD32)F1-ADtg f 31.375 5.1382 41.4883 21.2617
(B6.5XFAD x BXD32)F1-ADtg m 37.5 5.9331 49.1779 25.8221
(B6.5XFAD x BXD32)F1-Ntg f 21.0 7.2665 35.3024 6.6976
(B6.5XFAD x BXD32)F1-Ntg m 32.25 7.2665 46.5524 17.9476
(B6.5XFAD x BXD44)F1-ADtg f 28.0909 4.3819 36.7156 19.4662
(B6.5XFAD x BXD44)F1-ADtg m 18.8333 5.9331 30.5112 7.1555
(B6.5XFAD x BXD44)F1-Ntg f 27.0 10.2764 47.2266 6.7734
(B6.5XFAD x BXD44)F1-Ntg m 18.0 10.2764 38.2266 -2.2266
(B6.5XFAD x BXD56)F1-ADtg f 17.5 10.2764 37.7266 -2.7266
(B6.5XFAD x BXD56)F1-ADtg m 36.0 8.3906 52.515 19.485
(B6.5XFAD x BXD60)F1-ADtg f 41.2 6.4994 53.9925 28.4075
(B6.5XFAD x BXD60)F1-ADtg m 29.2 6.4994 41.9925 16.4075
(B6.5XFAD x BXD61)F1-ADtg f 41.3333 5.9331 53.0112 29.6555
(B6.5XFAD x BXD61)F1-ADtg m 28.75 7.2665 43.0524 14.4476
(B6.5XFAD x BXD61)F1-Ntg f 14.6667 8.3906 31.1816 -1.8483
(B6.5XFAD x BXD61)F1-Ntg m 28.25 7.2665 42.5524 13.9476
(B6.5XFAD x BXD62)F1-Ntg f 29.6667 8.3906 46.1816 13.1517
(B6.5XFAD x BXD62)F1-Ntg m 31.0 7.2665 45.3024 16.6976
(B6.5XFAD x BXD65)F1-ADtg f 31.4 4.5957 40.4456 22.3544
(B6.5XFAD x BXD65)F1-ADtg m 17.25 7.2665 31.5524 2.9476
(B6.5XFAD x BXD65)F1-Ntg f 29.3333 4.8443 38.8683 19.7984
(B6.5XFAD x BXD65)F1-Ntg m 18.3333 5.9331 30.0112 6.6555
(B6.5XFAD x BXD66)F1-ADtg f 33.6667 8.3906 50.1816 17.1517
(B6.5XFAD x BXD66)F1-ADtg m 25.6667 4.8443 35.2016 16.1317
(B6.5XFAD x BXD68)F1-ADtg f 30.1111 4.8443 39.646 20.5762
(B6.5XFAD x BXD68)F1-ADtg m 26.0 5.1382 36.1133 15.8867
(B6.5XFAD x BXD68)F1-Ntg f 27.1053 3.3341 33.6677 20.5429
(B6.5XFAD x BXD68)F1-Ntg m 25.25 7.2665 39.5524 10.9476
(B6.5XFAD x BXD69)F1-ADtg f 25.5 5.9331 37.1779 13.8221
(B6.5XFAD x BXD69)F1-ADtg m 31.75 7.2665 46.0524 17.4476
(B6.5XFAD x BXD69)F1-Ntg f 29.0 10.2764 49.2266 8.7734
(B6.5XFAD x BXD69)F1-Ntg m 18.5 7.2665 32.8024 4.1976
(B6.5XFAD x BXD75)F1-ADtg f 27.25 5.1382 37.3633 17.1367
(B6.5XFAD x BXD75)F1-ADtg m 36.1667 5.9331 47.8445 24.4888
(B6.5XFAD x BXD75)F1-Ntg f 21.7778 4.8443 31.3127 12.2428
(B6.5XFAD x BXD75)F1-Ntg m 25.0 10.2764 45.2266 4.7734
(B6.5XFAD x BXD77)F1-ADtg f 49.0 10.2764 69.2266 28.7734
(B6.5XFAD x BXD77)F1-ADtg m 47.0 10.2764 67.2266 26.7734
(B6.5XFAD x BXD77)F1-Ntg f 29.8 6.4994 42.5925 17.0075
(B6.5XFAD x BXD77)F1-Ntg m 23.4 6.4994 36.1925 10.6075
(B6.5XFAD x BXD87)F1-ADtg f 35.3333 4.1953 43.5908 27.0758
(B6.5XFAD x BXD87)F1-ADtg m 30.4 6.4994 43.1925 17.6075
(B6.5XFAD x BXD87)F1-Ntg f 11.6667 5.9331 23.3445 -0.0112
(B6.5XFAD x BXD87)F1-Ntg m 22.75 7.2665 37.0524 8.4476
(B6.5XFAD x BXD89)F1-Ntg f 3.0 10.2764 23.2266 -17.2266
(B6.5XFAD x BXD89)F1-Ntg m 21.5 10.2764 41.7266 1.2734
(B6.5XFAD x D2)F1-ADtg f 17.5 3.6333 24.6512 10.3488
(B6.5XFAD x D2)F1-ADtg m 18.375 5.1382 28.4883 8.2617
(B6.5XFAD x D2)F1-Ntg f 13.3846 4.0307 21.3182 5.4511
(B6.5XFAD x D2)F1-Ntg m 11.1667 5.9331 22.8445 -0.5112


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
(B6.5XFAD x B6)F1-ADtg both 29.4167 4.0427 37.3738 21.4595
(B6.5XFAD x B6)F1-Ntg both 25.3295 4.2427 33.6803 16.9787
(B6.5XFAD x BXD100)F1-ADtg both 34.7917 3.9244 42.5158 27.0675
(B6.5XFAD x BXD100)F1-Ntg both 28.3333 4.4001 36.9939 19.6728
(B6.5XFAD x BXD32)F1-ADtg both 34.4375 3.9244 42.1617 26.7133
(B6.5XFAD x BXD32)F1-Ntg both 26.625 5.1382 36.7383 16.5117
(B6.5XFAD x BXD44)F1-ADtg both 23.4621 3.6879 30.7209 16.2034
(B6.5XFAD x BXD44)F1-Ntg both 22.5 7.2665 36.8024 8.1976
(B6.5XFAD x BXD56)F1-ADtg both 26.75 6.6334 39.8062 13.6938
(B6.5XFAD x BXD60)F1-ADtg both 35.2 4.5957 44.2456 26.1544
(B6.5XFAD x BXD61)F1-ADtg both 35.0417 4.6905 44.2738 25.8095
(B6.5XFAD x BXD61)F1-Ntg both 21.4583 5.5499 32.382 10.5347
(B6.5XFAD x BXD62)F1-Ntg both 30.3333 5.5499 41.257 19.4097
(B6.5XFAD x BXD65)F1-ADtg both 24.325 4.2989 32.7864 15.8636
(B6.5XFAD x BXD65)F1-Ntg both 23.8333 3.8298 31.3714 16.2953
(B6.5XFAD x BXD66)F1-ADtg both 29.6667 4.8443 39.2016 20.1317
(B6.5XFAD x BXD68)F1-ADtg both 28.0556 3.5309 35.0053 21.1058
(B6.5XFAD x BXD68)F1-Ntg both 26.1776 3.9974 34.0457 18.3096
(B6.5XFAD x BXD69)F1-ADtg both 28.625 4.6905 37.8572 19.3928
(B6.5XFAD x BXD69)F1-Ntg both 23.75 6.293 36.1362 11.3638
(B6.5XFAD x BXD75)F1-ADtg both 31.7083 3.9244 39.4325 23.9842
(B6.5XFAD x BXD75)F1-Ntg both 23.3889 5.6805 34.5696 12.2082
(B6.5XFAD x BXD77)F1-ADtg both 48.0 7.2665 62.3024 33.6976
(B6.5XFAD x BXD77)F1-Ntg both 26.6 4.5957 35.6456 17.5544
(B6.5XFAD x BXD87)F1-ADtg both 32.8667 3.8679 40.4797 25.2536
(B6.5XFAD x BXD87)F1-Ntg both 17.2083 4.6905 26.4405 7.9762
(B6.5XFAD x BXD89)F1-Ntg both 12.25 7.2665 26.5524 -2.0524
(B6.5XFAD x D2)F1-ADtg both 17.9375 3.1465 24.1306 11.7444
(B6.5XFAD x D2)F1-Ntg both 12.2756 3.5864 19.3346 5.2167




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA