Phenotype measure:   Neuner1   epm_arm_ent_6mo

ID, description, units MPD:65956   epm_arm_ent_6mo   number of arm entries in elevated plus maze, 6 min test   [n]  6 mo
Data set, strains Neuner1   F1 AD-BXD   55 strains     sex: both     age: 23-57wks
Procedure elevated plus maze
Ontology mappings

  STRAIN COMPARISON PLOT
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Neuner1 - number of arm entries in elevated plus maze, 6 min test 6 mo



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested54 strains33 strains
Mean of the strain means12.542   n 11.724   n
Median of the strain means12.477   n 11.75   n
SD of the strain means± 3.1577 ± 2.7361
Coefficient of variation (CV)0.2518 0.2334
Min–max range of strain means5.0   –   19.143   n 6.0   –   16.5   n
Mean sample size per strain6.5   mice 4.6   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 7.946 7.946 0.2734 0.6015
strain 28 1282.7036 45.8108 1.576 0.0358
sex:strain 28 671.7841 23.9923 0.8254 0.722
Residuals 287 8342.32 29.0673


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
(B6.5XFAD x B6)F1-ADtg f 9.5714 5.5032   7 2.08 0.575 2.0, 17.0 -0.94
(B6.5XFAD x B6)F1-ADtg m 15.333 3.0768   6 1.2561 0.2007 12.0, 20.0 1.32
(B6.5XFAD x B6)F1-Ntg f 11.182 6.21   11 1.8724 0.5554 2.0, 26.0 -0.43
(B6.5XFAD x B6)F1-Ntg m 16.25 3.9476   4 1.9738 0.2429 13.0, 21.0 1.65
(B6.5XFAD x BXD100)F1-ADtg f 12.167 6.7057   6 2.7376 0.5512 6.0, 21.0 -0.12
(B6.5XFAD x BXD100)F1-ADtg m 10.25 4.4641   8 1.5783 0.4355 5.0, 16.0 -0.54
(B6.5XFAD x BXD100)F1-Ntg f 10.833 2.3166   6 0.94575 0.2138 8.0, 15.0 -0.54
(B6.5XFAD x BXD100)F1-Ntg m 11.2 4.4944   5 2.01 0.4013 5.0, 16.0 -0.19
(B6.5XFAD x BXD14)F1-ADtg f 16.556 3.7786   9 1.2595 0.2282 12.0, 24.0 1.27
(B6.5XFAD x BXD14)F1-Ntg f 14.0 6.4807   4 3.2404 0.4629 6.0, 21.0 0.46
(B6.5XFAD x BXD16)F1-ADtg f 8.875 5.8417   8 2.0653 0.6582 2.0, 20.0 -1.16
(B6.5XFAD x BXD22)F1-ADtg f 15.8 11.411   5 5.1029 0.7222 7.0, 34.0 1.03
(B6.5XFAD x BXD22)F1-Ntg f 11.75 4.3493   4 2.1747 0.3702 8.0, 18.0 -0.25
(B6.5XFAD x BXD2)F1-ADtg f 15.75 3.8822   8 1.3726 0.2465 9.0, 20.0 1.02
(B6.5XFAD x BXD2)F1-Ntg f 17.0 4.6188   7 1.7457 0.2717 9.0, 22.0 1.41
(B6.5XFAD x BXD32)F1-ADtg f 14.625 6.9885   8 2.4708 0.4778 2.0, 25.0 0.66
(B6.5XFAD x BXD32)F1-ADtg m 14.667 3.3267   6 1.3581 0.2268 10.0, 20.0 1.08
(B6.5XFAD x BXD32)F1-Ntg f 13.5 1.9149   4 0.95743 0.1418 12.0, 16.0 0.3
(B6.5XFAD x BXD32)F1-Ntg m 13.25 3.5   4 1.75 0.2642 9.0, 17.0 0.56
(B6.5XFAD x BXD34)F1-ADtg f 7.8889 5.3255   9 1.7752 0.6751 2.0, 16.0 -1.47
(B6.5XFAD x BXD34)F1-Ntg f 12.455 4.5687   11 1.3775 0.3668 6.0, 20.0 -0.03
(B6.5XFAD x BXD42)F1-ADtg f 17.556 5.9184   9 1.9728 0.3371 8.0, 26.0 1.59
(B6.5XFAD x BXD42)F1-Ntg f 13.4 6.4653   5 2.8914 0.4825 6.0, 20.0 0.27
(B6.5XFAD x BXD44)F1-ADtg f 12.091 4.8261   11 1.4551 0.3991 5.0, 21.0 -0.14
(B6.5XFAD x BXD44)F1-ADtg m 8.0 3.4059   6 1.3904 0.4257 4.0, 12.0 -1.36
(B6.5XFAD x BXD44)F1-Ntg f 18.5 0.70711   2   0.5 0.0382 18.0, 19.0 1.89
(B6.5XFAD x BXD44)F1-Ntg m 12.5 7.7782   2   5.5 0.6223 7.0, 18.0 0.28
(B6.5XFAD x BXD51)F1-ADtg f 11.0 2.8284   9 0.94281 0.2571 5.0, 14.0 -0.49
(B6.5XFAD x BXD51)F1-Ntg f 13.286 4.5722   7 1.7281 0.3441 7.0, 20.0 0.24
(B6.5XFAD x BXD55)F1-ADtg f 19.143 5.757   7 2.1759 0.3007 10.0, 27.0 2.09
(B6.5XFAD x BXD55)F1-Ntg f 12.333 5.8538   6 2.3898 0.4746 3.0, 21.0 -0.07
(B6.5XFAD x BXD56)F1-ADtg f 11.5 7.7782   2   5.5 0.6764 6.0, 17.0 -0.33
(B6.5XFAD x BXD56)F1-ADtg m 7.3333 3.0551   3 1.7638 0.4166 4.0, 10.0 -1.6
(B6.5XFAD x BXD56)F1-Ntg f 9.6 4.5607   5 2.0396 0.4751 4.0, 16.0 -0.93
(B6.5XFAD x BXD56)F1-Ntg m 8.0 0.0   1   0.0 0.0 8.0, 8.0 -1.36
(B6.5XFAD x BXD60)F1-ADtg f 10.8 4.0866   5 1.8276 0.3784 5.0, 16.0 -0.55
(B6.5XFAD x BXD60)F1-ADtg m 9.6 5.3198   5 2.3791 0.5541 4.0, 18.0 -0.78
(B6.5XFAD x BXD60)F1-Ntg f 16.25 9.2871   4 4.6435 0.5715 7.0, 28.0 1.17
(B6.5XFAD x BXD61)F1-ADtg f 9.6667 4.4121   6 1.8012 0.4564 6.0, 18.0 -0.91
(B6.5XFAD x BXD61)F1-ADtg m 12.0 2.4495   4 1.2247 0.2041 9.0, 14.0 0.1
(B6.5XFAD x BXD61)F1-Ntg f 8.0 4.5826   3 2.6458 0.5728 4.0, 13.0 -1.44
(B6.5XFAD x BXD61)F1-Ntg m 13.5 9.4692   4 4.7346 0.7014 5.0, 27.0 0.65
(B6.5XFAD x BXD62)F1-ADtg f 15.0 0.0   1   0.0 0.0 15.0, 15.0 0.78
(B6.5XFAD x BXD62)F1-ADtg m 8.25 5.6789   4 2.8395 0.6884 4.0, 16.0 -1.27
(B6.5XFAD x BXD62)F1-Ntg f 7.3333 4.0415   3 2.3333 0.5511 3.0, 11.0 -1.65
(B6.5XFAD x BXD62)F1-Ntg m 6.0 2.0   4 1.0 0.3333 3.0, 7.0 -2.09
(B6.5XFAD x BXD65)F1-ADtg f 16.8 10.261   10 3.2448 0.6108 3.0, 38.0 1.35
(B6.5XFAD x BXD65)F1-ADtg m 12.5 3.1091   4 1.5546 0.2487 9.0, 16.0 0.28
(B6.5XFAD x BXD65)F1-Ntg f 14.778 8.9969   9 2.999 0.6088 3.0, 27.0 0.71
(B6.5XFAD x BXD65)F1-Ntg m 13.667 4.2269   6 1.7256 0.3093 8.0, 20.0 0.71
(B6.5XFAD x BXD66)F1-ADtg f 15.333 1.1547   3 0.66667 0.0753 14.0, 16.0 0.88
(B6.5XFAD x BXD66)F1-ADtg m 11.111 4.5674   9 1.5225 0.4111 1.0, 16.0 -0.22
(B6.5XFAD x BXD66)F1-Ntg f 16.0 0.0   1   0.0 0.0 16.0, 16.0 1.1
(B6.5XFAD x BXD66)F1-Ntg m 11.4 2.0736   5 0.92736 0.1819 10.0, 15.0 -0.12
(B6.5XFAD x BXD68)F1-ADtg f 11.778 3.0732   9 1.0244 0.2609 6.0, 16.0 -0.24
(B6.5XFAD x BXD68)F1-ADtg m 14.0 4.3095   8 1.5236 0.3078 9.0, 19.0 0.83
(B6.5XFAD x BXD68)F1-Ntg f 12.421 5.7862   19 1.3274 0.4658 1.0, 20.0 -0.04
(B6.5XFAD x BXD68)F1-Ntg m 10.0 6.6332   4 3.3166 0.6633 1.0, 17.0 -0.63
(B6.5XFAD x BXD69)F1-ADtg f 12.5 3.5071   6 1.4318 0.2806 7.0, 16.0 -0.01
(B6.5XFAD x BXD69)F1-ADtg m 15.25 3.594   4 1.797 0.2357 10.0, 18.0 1.29
(B6.5XFAD x BXD69)F1-Ntg f 13.0 2.8284   2   2.0 0.2176 11.0, 15.0 0.15
(B6.5XFAD x BXD69)F1-Ntg m 11.75 2.8723   4 1.4361 0.2444 8.0, 15.0 0.01
(B6.5XFAD x BXD70)F1-ADtg f 5.0 0.0   1   0.0 0.0 5.0, 5.0 -2.39
(B6.5XFAD x BXD70)F1-Ntg f 7.0 0.0   1   0.0 0.0 7.0, 7.0 -1.75
(B6.5XFAD x BXD75)F1-ADtg f 12.5 3.4641   8 1.2247 0.2771 8.0, 18.0 -0.01
(B6.5XFAD x BXD75)F1-ADtg m 10.5 7.3417   6 2.9972 0.6992 5.0, 25.0 -0.45
(B6.5XFAD x BXD75)F1-Ntg f 13.778 7.4293   9 2.4764 0.5392 1.0, 21.0 0.39
(B6.5XFAD x BXD75)F1-Ntg m 16.5 6.364   2   4.5 0.3857 12.0, 21.0 1.75
(B6.5XFAD x BXD77)F1-ADtg f 13.0 4.2426   2   3.0 0.3264 10.0, 16.0 0.15
(B6.5XFAD x BXD77)F1-ADtg m 14.0 2.8284   2   2.0 0.202 12.0, 16.0 0.83
(B6.5XFAD x BXD77)F1-Ntg f 14.2 3.6332   5 1.6248 0.2559 8.0, 17.0 0.53
(B6.5XFAD x BXD77)F1-Ntg m 12.8 5.0695   5 2.2672 0.3961 7.0, 18.0 0.39
(B6.5XFAD x BXD81)F1-ADtg f 14.75 8.2366   12 2.3777 0.5584 5.0, 28.0 0.7
(B6.5XFAD x BXD81)F1-Ntg f 12.5 7.0508   8 2.4928 0.5641 4.0, 24.0 -0.01
(B6.5XFAD x BXD87)F1-ADtg f 11.833 6.1324   12 1.7703 0.5182 3.0, 21.0 -0.22
(B6.5XFAD x BXD87)F1-ADtg m 8.4 2.881   5 1.2884 0.343 5.0, 12.0 -1.21
(B6.5XFAD x BXD87)F1-Ntg f 6.3333 3.8816   6 1.5846 0.6129 2.0, 12.0 -1.97
(B6.5XFAD x BXD87)F1-Ntg m 10.0 6.9761   4 3.4881 0.6976 2.0, 19.0 -0.63
(B6.5XFAD x BXD89)F1-ADtg m 15.0 0.0   1   0.0 0.0 15.0, 15.0 1.2
(B6.5XFAD x BXD89)F1-Ntg f 10.5 7.7782   2   5.5 0.7408 5.0, 16.0 -0.65
(B6.5XFAD x BXD89)F1-Ntg m 14.0 1.4142   2   1.0 0.101 13.0, 15.0 0.83
(B6.5XFAD x BXD99)F1-ADtg f 9.75 3.594   4 1.797 0.3686 5.0, 13.0 -0.88
(B6.5XFAD x BXD99)F1-Ntg f 16.0 0.0   1   0.0 0.0 16.0, 16.0 1.1
(B6.5XFAD x D2)F1-ADtg f 11.0 4.98   16 1.245 0.4527 1.0, 20.0 -0.49
(B6.5XFAD x D2)F1-ADtg m 9.875 5.7678   8 2.0392 0.5841 3.0, 18.0 -0.68
(B6.5XFAD x D2)F1-Ntg f 9.0769 4.4993   13 1.2479 0.4957 3.0, 18.0 -1.1
(B6.5XFAD x D2)F1-Ntg m 10.0 5.099   6 2.0817 0.5099 3.0, 14.0 -0.63


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
(B6.5XFAD x B6)F1-ADtg f 9.5714 2.0378 13.5823 5.5606
(B6.5XFAD x B6)F1-ADtg m 15.3333 2.201 19.6656 11.0011
(B6.5XFAD x B6)F1-Ntg f 11.1818 1.6256 14.3814 7.9823
(B6.5XFAD x B6)F1-Ntg m 16.25 2.6957 21.5559 10.9441
(B6.5XFAD x BXD100)F1-ADtg f 12.1667 2.201 16.4989 7.8344
(B6.5XFAD x BXD100)F1-ADtg m 10.25 1.9062 14.0018 6.4982
(B6.5XFAD x BXD100)F1-Ntg f 10.8333 2.201 15.1656 6.5011
(B6.5XFAD x BXD100)F1-Ntg m 11.2 2.4111 15.9457 6.4543
(B6.5XFAD x BXD32)F1-ADtg f 14.625 1.9062 18.3768 10.8732
(B6.5XFAD x BXD32)F1-ADtg m 14.6667 2.201 18.9989 10.3344
(B6.5XFAD x BXD32)F1-Ntg f 13.5 2.6957 18.8059 8.1941
(B6.5XFAD x BXD32)F1-Ntg m 13.25 2.6957 18.5559 7.9441
(B6.5XFAD x BXD44)F1-ADtg f 12.0909 1.6256 15.2905 8.8914
(B6.5XFAD x BXD44)F1-ADtg m 8.0 2.201 12.3322 3.6678
(B6.5XFAD x BXD44)F1-Ntg f 18.5 3.8123 26.0036 10.9964
(B6.5XFAD x BXD44)F1-Ntg m 12.5 3.8123 20.0036 4.9964
(B6.5XFAD x BXD56)F1-ADtg f 11.5 3.8123 19.0036 3.9964
(B6.5XFAD x BXD56)F1-ADtg m 7.3333 3.1127 13.46 1.2067
(B6.5XFAD x BXD60)F1-ADtg f 10.8 2.4111 15.5457 6.0543
(B6.5XFAD x BXD60)F1-ADtg m 9.6 2.4111 14.3457 4.8543
(B6.5XFAD x BXD61)F1-ADtg f 9.6667 2.201 13.9989 5.3344
(B6.5XFAD x BXD61)F1-ADtg m 12.0 2.6957 17.3059 6.6941
(B6.5XFAD x BXD61)F1-Ntg f 8.0 3.1127 14.1267 1.8733
(B6.5XFAD x BXD61)F1-Ntg m 13.5 2.6957 18.8059 8.1941
(B6.5XFAD x BXD62)F1-Ntg f 7.3333 3.1127 13.46 1.2067
(B6.5XFAD x BXD62)F1-Ntg m 6.0 2.6957 11.3059 0.6941
(B6.5XFAD x BXD65)F1-ADtg f 16.8 1.7049 20.1557 13.4443
(B6.5XFAD x BXD65)F1-ADtg m 12.5 2.6957 17.8059 7.1941
(B6.5XFAD x BXD65)F1-Ntg f 14.7778 1.7971 18.315 11.2405
(B6.5XFAD x BXD65)F1-Ntg m 13.6667 2.201 17.9989 9.3344
(B6.5XFAD x BXD66)F1-ADtg f 15.3333 3.1127 21.46 9.2067
(B6.5XFAD x BXD66)F1-ADtg m 11.1111 1.7971 14.6484 7.5739
(B6.5XFAD x BXD68)F1-ADtg f 11.7778 1.7971 15.315 8.2405
(B6.5XFAD x BXD68)F1-ADtg m 14.0 1.9062 17.7518 10.2482
(B6.5XFAD x BXD68)F1-Ntg f 12.4211 1.2369 14.8555 9.9866
(B6.5XFAD x BXD68)F1-Ntg m 10.0 2.6957 15.3059 4.6941
(B6.5XFAD x BXD69)F1-ADtg f 12.5 2.201 16.8322 8.1678
(B6.5XFAD x BXD69)F1-ADtg m 15.25 2.6957 20.5559 9.9441
(B6.5XFAD x BXD69)F1-Ntg f 13.0 3.8123 20.5036 5.4964
(B6.5XFAD x BXD69)F1-Ntg m 11.75 2.6957 17.0559 6.4441
(B6.5XFAD x BXD75)F1-ADtg f 12.5 1.9062 16.2518 8.7482
(B6.5XFAD x BXD75)F1-ADtg m 10.5 2.201 14.8322 6.1678
(B6.5XFAD x BXD75)F1-Ntg f 13.7778 1.7971 17.315 10.2405
(B6.5XFAD x BXD75)F1-Ntg m 16.5 3.8123 24.0036 8.9964
(B6.5XFAD x BXD77)F1-ADtg f 13.0 3.8123 20.5036 5.4964
(B6.5XFAD x BXD77)F1-ADtg m 14.0 3.8123 21.5036 6.4964
(B6.5XFAD x BXD77)F1-Ntg f 14.2 2.4111 18.9457 9.4543
(B6.5XFAD x BXD77)F1-Ntg m 12.8 2.4111 17.5457 8.0543
(B6.5XFAD x BXD87)F1-ADtg f 11.8333 1.5564 14.8967 8.77
(B6.5XFAD x BXD87)F1-ADtg m 8.4 2.4111 13.1457 3.6543
(B6.5XFAD x BXD87)F1-Ntg f 6.3333 2.201 10.6656 2.0011
(B6.5XFAD x BXD87)F1-Ntg m 10.0 2.6957 15.3059 4.6941
(B6.5XFAD x BXD89)F1-Ntg f 10.5 3.8123 18.0036 2.9964
(B6.5XFAD x BXD89)F1-Ntg m 14.0 3.8123 21.5036 6.4964
(B6.5XFAD x D2)F1-ADtg f 11.0 1.3479 13.6529 8.3471
(B6.5XFAD x D2)F1-ADtg m 9.875 1.9062 13.6268 6.1232
(B6.5XFAD x D2)F1-Ntg f 9.0769 1.4953 12.0201 6.1338
(B6.5XFAD x D2)F1-Ntg m 10.0 2.201 14.3322 5.6678


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
(B6.5XFAD x B6)F1-ADtg both 12.4524 1.4998 15.4043 9.5005
(B6.5XFAD x B6)F1-Ntg both 13.7159 1.574 16.8139 10.618
(B6.5XFAD x BXD100)F1-ADtg both 11.2083 1.4558 14.0738 8.3428
(B6.5XFAD x BXD100)F1-Ntg both 11.0167 1.6323 14.2295 7.8038
(B6.5XFAD x BXD32)F1-ADtg both 14.6458 1.4558 17.5113 11.7803
(B6.5XFAD x BXD32)F1-Ntg both 13.375 1.9062 17.1268 9.6232
(B6.5XFAD x BXD44)F1-ADtg both 10.0455 1.3681 12.7383 7.3526
(B6.5XFAD x BXD44)F1-Ntg both 15.5 2.6957 20.8059 10.1941
(B6.5XFAD x BXD56)F1-ADtg both 9.4167 2.4608 14.2602 4.5731
(B6.5XFAD x BXD60)F1-ADtg both 10.2 1.7049 13.5557 6.8443
(B6.5XFAD x BXD61)F1-ADtg both 10.8333 1.7401 14.2583 7.4084
(B6.5XFAD x BXD61)F1-Ntg both 10.75 2.0589 14.8024 6.6976
(B6.5XFAD x BXD62)F1-Ntg both 6.6667 2.0589 10.7191 2.6142
(B6.5XFAD x BXD65)F1-ADtg both 14.65 1.5948 17.789 11.511
(B6.5XFAD x BXD65)F1-Ntg both 14.2222 1.4208 17.0187 11.4258
(B6.5XFAD x BXD66)F1-ADtg both 13.2222 1.7971 16.7595 9.685
(B6.5XFAD x BXD68)F1-ADtg both 12.8889 1.3099 15.4671 10.3107
(B6.5XFAD x BXD68)F1-Ntg both 11.2105 1.483 14.1294 8.2917
(B6.5XFAD x BXD69)F1-ADtg both 13.875 1.7401 17.2999 10.4501
(B6.5XFAD x BXD69)F1-Ntg both 12.375 2.3345 16.97 7.78
(B6.5XFAD x BXD75)F1-ADtg both 11.5 1.4558 14.3655 8.6345
(B6.5XFAD x BXD75)F1-Ntg both 15.1389 2.1073 19.2867 10.9911
(B6.5XFAD x BXD77)F1-ADtg both 13.5 2.6957 18.8059 8.1941
(B6.5XFAD x BXD77)F1-Ntg both 13.5 1.7049 16.8557 10.1443
(B6.5XFAD x BXD87)F1-ADtg both 10.1167 1.4349 12.9409 7.2924
(B6.5XFAD x BXD87)F1-Ntg both 8.1667 1.7401 11.5916 4.7417
(B6.5XFAD x BXD89)F1-Ntg both 12.25 2.6957 17.5559 6.9441
(B6.5XFAD x D2)F1-ADtg both 10.4375 1.1673 12.735 8.14
(B6.5XFAD x D2)F1-Ntg both 9.5385 1.3305 12.1572 6.9198




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA