Project measure / variable:   Neuner1   neg_geotaxis_14mo

ID, description, units MPD:65949   neg_geotaxis_14mo   mean time to right body when placed face down on 45 degree inclined screen (negative geotaxis), 3 min test, across 3 trials   [s]  14 mo  
Data set, strains Neuner1   F1 AD-BXD   51 strains     sex: both     age: 23-57wks
Procedure inclined screen test
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  STRAIN COMPARISON PLOT
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Neuner1 - mean time to right body when placed face down on 45 degree inclined screen (negative geotaxis), 3 min test, across 3 trials 14 mo



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested49 strains35 strains
Mean of the strain means31.006   s 27.362   s
Median of the strain means20.886   s 19.308   s
SD of the strain means± 29.024 ± 18.135
Coefficient of variation (CV)0.9361 0.6628
Min–max range of strain means4.0967   –   180.0   s 5.4433   –   76.54   s
Mean sample size per strain4.6   mice 4.8   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 1005.3488 1005.3488 1.4377 0.2318
strain 24 53545.882 2231.0784 3.1906 < 0.0001
sex:strain 24 23469.2783 977.8866 1.3984 0.1086
Residuals 228 159434.1089 699.2724


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
(B6.5XFAD x B6)F1-ADtg f 37.96 0.0   1   0.0 0.0 37.96, 37.96 0.24
(B6.5XFAD x B6)F1-ADtg m 38.473 38.335   33 6.6732 0.9964 5.453333333, 180.0 0.61
(B6.5XFAD x B6)F1-Ntg f 15.34 11.418   11 3.4427 0.7443 5.036666667, 40.35333333 -0.54
(B6.5XFAD x B6)F1-Ntg m 18.615 33.785   13 9.3702 1.8149 5.743333333, 130.65 -0.48
(B6.5XFAD x BXD100)F1-ADtg f 16.907 5.5814   2   3.9467 0.3301 12.96, 20.85333333 -0.49
(B6.5XFAD x BXD100)F1-ADtg m 24.666 17.883   7 6.7592 0.725 10.15333333, 55.88 -0.15
(B6.5XFAD x BXD100)F1-Ntg f 20.886 9.5578   4 4.7789 0.4576 11.66666667, 33.61666667 -0.35
(B6.5XFAD x BXD100)F1-Ntg m 27.577 19.826   6 8.0938 0.7189 8.913333333, 54.70666667 0.01
(B6.5XFAD x BXD14)F1-ADtg f 70.78 69.52   2   49.16 0.9822 21.62333333, 119.9433333 1.37
(B6.5XFAD x BXD14)F1-Ntg f 12.773 5.0535   2   3.5733 0.3956 9.2, 16.34666667 -0.63
(B6.5XFAD x BXD16)F1-ADtg f 10.517 5.3844   4 2.6922 0.5119 5.706666667, 18.10333333 -0.71
(B6.5XFAD x BXD22)F1-ADtg f 44.007 23.231   2   16.427 0.5279 27.58, 60.43333333 0.45
(B6.5XFAD x BXD22)F1-Ntg f 22.636 5.8769   3 3.393 0.2596 16.90666667, 28.65 -0.29
(B6.5XFAD x BXD32)F1-ADtg f 30.209 9.245   3 5.3376 0.306 19.995, 38.00333333 -0.03
(B6.5XFAD x BXD32)F1-ADtg m 15.623 7.8476   3 4.5308 0.5023 8.96, 24.27333333 -0.65
(B6.5XFAD x BXD32)F1-Ntg f 10.987 1.8728   3 1.0812 0.1705 9.22, 12.95 -0.69
(B6.5XFAD x BXD32)F1-Ntg m 30.357 0.0   1   0.0 0.0 30.35666667, 30.35666667 0.17
(B6.5XFAD x BXD42)F1-ADtg f 8.58 1.2916   2   0.91333 0.1505 7.666666667, 9.493333333 -0.77
(B6.5XFAD x BXD42)F1-Ntg f 4.5233 0.0   1   0.0 0.0 4.523333333, 4.523333333 -0.91
(B6.5XFAD x BXD44)F1-ADtg f 54.27 43.84   12 12.655 0.8078 4.903333333, 142.4266667 0.8
(B6.5XFAD x BXD44)F1-ADtg m 32.062 27.005   8 9.5478 0.8423 12.42333333, 78.84 0.26
(B6.5XFAD x BXD44)F1-Ntg f 8.9267 0.0   1   0.0 0.0 8.926666667, 8.926666667 -0.76
(B6.5XFAD x BXD44)F1-Ntg m 22.781 4.9835   3 2.8772 0.2188 17.25333333, 26.93 -0.25
(B6.5XFAD x BXD51)F1-ADtg f 76.75 64.06   5 28.649 0.8346 23.39666667, 180.0 1.58
(B6.5XFAD x BXD51)F1-Ntg f 36.138 38.123   4 19.062 1.0549 7.473333333, 92.34333333 0.18
(B6.5XFAD x BXD55)F1-ADtg f 47.127 20.584   4 10.292 0.4368 19.12666667, 63.95666667 0.56
(B6.5XFAD x BXD55)F1-Ntg f 9.63 4.2992   2   3.04 0.4464 6.59, 12.67 -0.74
(B6.5XFAD x BXD56)F1-ADtg m 38.802 28.822   3 16.64 0.7428 10.06, 67.70333333 0.63
(B6.5XFAD x BXD56)F1-Ntg f 17.972 11.58   2   8.1883 0.6444 9.783333333, 26.16 -0.45
(B6.5XFAD x BXD56)F1-Ntg m 38.297 0.0   1   0.0 0.0 38.29666667, 38.29666667 0.6
(B6.5XFAD x BXD60)F1-ADtg f 55.7 30.942   4 15.471 0.5555 21.03333333, 95.49666667 0.85
(B6.5XFAD x BXD60)F1-ADtg m 38.721 30.185   5 13.499 0.7795 11.03666667, 84.45666667 0.63
(B6.5XFAD x BXD60)F1-Ntg f 7.3867 3.5565   3 2.0534 0.4815 5.133333333, 11.48666667 -0.81
(B6.5XFAD x BXD61)F1-ADtg f 17.166 10.15   7 3.8363 0.5913 9.81, 36.86666667 -0.48
(B6.5XFAD x BXD61)F1-ADtg m 9.3411 6.2267   3 3.595 0.6666 3.73, 16.04 -0.99
(B6.5XFAD x BXD61)F1-Ntg f 7.3013 1.1933   5 0.53364 0.1634 5.68, 8.673333333 -0.82
(B6.5XFAD x BXD61)F1-Ntg m 7.7794 4.3362   6 1.7703 0.5574 3.08, 15.53 -1.08
(B6.5XFAD x BXD62)F1-ADtg f 77.01 39.926   2   28.232 0.5185 48.77666667, 105.24 1.59
(B6.5XFAD x BXD62)F1-ADtg m 19.232 8.2708   2   5.8483 0.4301 13.38333333, 25.08 -0.45
(B6.5XFAD x BXD62)F1-Ntg f 30.972 29.046   2   20.538 0.9378 10.43333333, 51.51 0.0
(B6.5XFAD x BXD62)F1-Ntg m 49.511 53.88   3 31.105 1.0882 8.783333333, 110.6 1.22
(B6.5XFAD x BXD65)F1-ADtg f 39.164 30.203   7 11.416 0.7712 10.65666667, 96.79666667 0.28
(B6.5XFAD x BXD65)F1-ADtg m 14.767 11.823   2   8.36 0.8006 6.406666667, 23.12666667 -0.69
(B6.5XFAD x BXD65)F1-Ntg f 15.649 13.926   8 4.9236 0.8899 5.93, 47.62666667 -0.53
(B6.5XFAD x BXD65)F1-Ntg m 18.402 12.876   2   9.105 0.6997 9.296666667, 27.50666667 -0.49
(B6.5XFAD x BXD66)F1-ADtg f 18.696 19.585   3 11.307 1.0476 7.043333333, 41.30666667 -0.42
(B6.5XFAD x BXD66)F1-ADtg m 11.261 7.9459   5 3.5535 0.7056 2.996666667, 22.20666667 -0.89
(B6.5XFAD x BXD66)F1-Ntg f 4.0967 0.0   1   0.0 0.0 4.096666667, 4.096666667 -0.93
(B6.5XFAD x BXD66)F1-Ntg m 19.308 15.65   3 9.0354 0.8105 8.883333333, 37.30333333 -0.44
(B6.5XFAD x BXD68)F1-ADtg f 51.41 18.939   3 10.934 0.3684 35.24, 72.24666667 0.7
(B6.5XFAD x BXD68)F1-ADtg m 10.676 4.0134   7 1.5169 0.3759 7.083333333, 19.01333333 -0.92
(B6.5XFAD x BXD68)F1-Ntg f 25.197 21.986   10 6.9526 0.8726 7.633333333, 70.75666667 -0.2
(B6.5XFAD x BXD68)F1-Ntg m 9.16 3.1631   2   2.2367 0.3453 6.923333333, 11.39666667 -1.0
(B6.5XFAD x BXD69)F1-ADtg f 46.303 34.312   6 14.008 0.741 15.21666667, 98.82333333 0.53
(B6.5XFAD x BXD69)F1-ADtg m 61.52 44.365   5 19.841 0.7211 13.09666667, 127.1166667 1.88
(B6.5XFAD x BXD69)F1-Ntg f 12.861 8.0615   4 4.0308 0.6268 8.47, 24.94333333 -0.63
(B6.5XFAD x BXD69)F1-Ntg m 17.774 13.135   6 5.3623 0.739 4.386666667, 36.24333333 -0.53
(B6.5XFAD x BXD70)F1-ADtg f 180.0 0.0   1   0.0 0.0 180.0, 180.0 5.13
(B6.5XFAD x BXD70)F1-ADtg m 17.513 9.6233   3 5.556 0.5495 8.46, 27.62 -0.54
(B6.5XFAD x BXD70)F1-Ntg f 12.512 8.2895   3 4.7859 0.6625 6.28, 21.92 -0.64
(B6.5XFAD x BXD70)F1-Ntg m 15.377 1.2916   2   0.91333 0.084 14.46333333, 16.29 -0.66
(B6.5XFAD x BXD75)F1-ADtg f 26.474 15.92   4 7.96 0.6013 6.436666667, 41.11666667 -0.16
(B6.5XFAD x BXD75)F1-ADtg m 76.54 49.089   4 24.544 0.6413 15.69333333, 135.4466667 2.71
(B6.5XFAD x BXD75)F1-Ntg f 21.981 16.711   6 6.8223 0.7603 9.03, 53.15333333 -0.31
(B6.5XFAD x BXD75)F1-Ntg m 12.057 0.0   1   0.0 0.0 12.05666667, 12.05666667 -0.84
(B6.5XFAD x BXD77)F1-ADtg f 39.779 28.758   5 12.861 0.723 5.663333333, 75.19666667 0.3
(B6.5XFAD x BXD77)F1-ADtg m 36.158 46.327   3 26.747 1.2813 5.783333333, 89.48 0.49
(B6.5XFAD x BXD77)F1-Ntg f 14.691 12.667   10 4.0057 0.8622 5.51, 48.51666667 -0.56
(B6.5XFAD x BXD77)F1-Ntg m 17.253 5.0458   6 2.06 0.2925 10.80666667, 24.49333333 -0.56
(B6.5XFAD x BXD81)F1-ADtg f 43.193 33.209   6 13.558 0.7689 14.04, 103.3633333 0.42
(B6.5XFAD x BXD81)F1-Ntg f 14.407 3.7135   5 1.6607 0.2577 8.87, 19.33333333 -0.57
(B6.5XFAD x BXD87)F1-ADtg f 50.89 36.117   10 11.421 0.7097 7.79, 125.3433333 0.69
(B6.5XFAD x BXD87)F1-ADtg m 61.83 48.648   4 24.324 0.7868 20.49666667, 129.1433333 1.9
(B6.5XFAD x BXD87)F1-Ntg f 12.3 5.6932   3 3.287 0.4629 8.573333333, 18.85333333 -0.64
(B6.5XFAD x BXD87)F1-Ntg m 5.4433 0.0   1   0.0 0.0 5.443333333, 5.443333333 -1.21
(B6.5XFAD x BXD89)F1-ADtg m 31.697 0.0   1   0.0 0.0 31.69666667, 31.69666667 0.24
(B6.5XFAD x BXD89)F1-Ntg f 12.795 0.05893   2   0.04167 0.0046 12.75333333, 12.83666667 -0.63
(B6.5XFAD x BXD89)F1-Ntg m 70.05 83.91   2   59.33 1.1977 10.72333333, 129.3833333 2.35
(B6.5XFAD x BXD99)F1-ADtg f 52.22 0.0   1   0.0 0.0 52.22333333, 52.22333333 0.73
(B6.5XFAD x BXD99)F1-Ntg f 13.79 0.0   1   0.0 0.0 13.79, 13.79 -0.59
(B6.5XFAD x D2)F1-ADtg f 38.079 30.899   19 7.0887 0.8114 12.24666667, 125.9166667 0.24
(B6.5XFAD x D2)F1-ADtg m 18.069 22.907   8 8.0989 1.2678 4.8, 74.10666667 -0.51
(B6.5XFAD x D2)F1-Ntg f 20.345 21.412   13 5.9386 1.0524 3.47, 85.49 -0.37
(B6.5XFAD x D2)F1-Ntg m 20.983 9.9025   5 4.4285 0.4719 7.733333333, 32.65 -0.35


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
(B6.5XFAD x B6)F1-Ntg f 15.3403 7.9731 31.0507 -0.3701
(B6.5XFAD x B6)F1-Ntg m 18.6149 7.3342 33.0663 4.1634
(B6.5XFAD x BXD100)F1-ADtg f 16.9067 18.6986 53.7507 -19.9374
(B6.5XFAD x BXD100)F1-ADtg m 24.6657 9.9948 44.3597 4.9717
(B6.5XFAD x BXD100)F1-Ntg f 20.8858 13.2219 46.9385 -5.1669
(B6.5XFAD x BXD100)F1-Ntg m 27.5772 10.7956 48.8492 6.3053
(B6.5XFAD x BXD32)F1-ADtg f 30.2094 15.2673 60.2925 0.1264
(B6.5XFAD x BXD32)F1-ADtg m 15.6233 15.2673 45.7064 -14.4597
(B6.5XFAD x BXD44)F1-ADtg f 54.2675 7.6337 69.309 39.226
(B6.5XFAD x BXD44)F1-ADtg m 32.0625 9.3493 50.4845 13.6405
(B6.5XFAD x BXD60)F1-ADtg f 55.7025 13.2219 81.7552 29.6498
(B6.5XFAD x BXD60)F1-ADtg m 38.7213 11.826 62.0236 15.4191
(B6.5XFAD x BXD61)F1-ADtg f 17.1662 9.9948 36.8602 -2.5278
(B6.5XFAD x BXD61)F1-ADtg m 9.3411 15.2673 39.4242 -20.742
(B6.5XFAD x BXD61)F1-Ntg f 7.3013 11.826 30.6036 -16.0009
(B6.5XFAD x BXD61)F1-Ntg m 7.7794 10.7956 29.0514 -13.4925
(B6.5XFAD x BXD62)F1-ADtg f 77.0083 18.6986 113.8524 40.1643
(B6.5XFAD x BXD62)F1-ADtg m 19.2317 18.6986 56.0757 -17.6124
(B6.5XFAD x BXD62)F1-Ntg f 30.9717 18.6986 67.8157 -5.8724
(B6.5XFAD x BXD62)F1-Ntg m 49.5111 15.2673 79.5942 19.428
(B6.5XFAD x BXD65)F1-ADtg f 39.1638 9.9948 58.8578 19.4698
(B6.5XFAD x BXD65)F1-ADtg m 14.7667 18.6986 51.6107 -22.0774
(B6.5XFAD x BXD65)F1-Ntg f 15.6487 9.3493 34.0708 -2.7733
(B6.5XFAD x BXD65)F1-Ntg m 18.4017 18.6986 55.2457 -18.4424
(B6.5XFAD x BXD66)F1-ADtg f 18.6956 15.2673 48.7786 -11.3875
(B6.5XFAD x BXD66)F1-ADtg m 11.2607 11.826 34.5629 -12.0416
(B6.5XFAD x BXD68)F1-ADtg f 51.4122 15.2673 81.4953 21.3292
(B6.5XFAD x BXD68)F1-ADtg m 10.6762 9.9948 30.3702 -9.0178
(B6.5XFAD x BXD68)F1-Ntg f 25.1967 8.3623 41.6738 8.7195
(B6.5XFAD x BXD68)F1-Ntg m 9.16 18.6986 46.0041 -27.6841
(B6.5XFAD x BXD69)F1-ADtg f 46.3033 10.7956 67.5753 25.0314
(B6.5XFAD x BXD69)F1-ADtg m 61.5213 11.826 84.8236 38.2191
(B6.5XFAD x BXD69)F1-Ntg f 12.8608 13.2219 38.9135 -13.1919
(B6.5XFAD x BXD69)F1-Ntg m 17.7744 10.7956 39.0464 -3.4975
(B6.5XFAD x BXD70)F1-Ntg f 12.5122 15.2673 42.5953 -17.5708
(B6.5XFAD x BXD70)F1-Ntg m 15.3767 18.6986 52.2207 -21.4674
(B6.5XFAD x BXD75)F1-ADtg f 26.4742 13.2219 52.5269 0.4215
(B6.5XFAD x BXD75)F1-ADtg m 76.5442 13.2219 102.5969 50.4915
(B6.5XFAD x BXD77)F1-ADtg f 39.7787 11.826 63.0809 16.4764
(B6.5XFAD x BXD77)F1-ADtg m 36.1578 15.2673 66.2408 6.0747
(B6.5XFAD x BXD77)F1-Ntg f 14.691 8.3623 31.1682 -1.7862
(B6.5XFAD x BXD77)F1-Ntg m 17.2533 10.7956 38.5253 -4.0186
(B6.5XFAD x BXD87)F1-ADtg f 50.89 8.3623 67.3672 34.4128
(B6.5XFAD x BXD87)F1-ADtg m 61.8275 13.2219 87.8802 35.7748
(B6.5XFAD x BXD89)F1-Ntg f 12.795 18.6986 49.6391 -24.0491
(B6.5XFAD x BXD89)F1-Ntg m 70.0533 18.6986 106.8974 33.2093
(B6.5XFAD x D2)F1-ADtg f 38.0789 6.0666 50.0327 26.1251
(B6.5XFAD x D2)F1-ADtg m 18.0688 9.3493 36.4908 -0.3533
(B6.5XFAD x D2)F1-Ntg f 20.3454 7.3342 34.7968 5.8939
(B6.5XFAD x D2)F1-Ntg m 20.9833 11.826 44.2856 -2.3189


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
(B6.5XFAD x B6)F1-Ntg both 16.9776 5.4167 27.6507 6.3045
(B6.5XFAD x BXD100)F1-ADtg both 20.7862 10.6011 41.6748 -0.1024
(B6.5XFAD x BXD100)F1-Ntg both 24.2315 8.5347 41.0485 7.4146
(B6.5XFAD x BXD32)F1-ADtg both 22.9164 10.7956 44.1883 1.6444
(B6.5XFAD x BXD44)F1-ADtg both 43.165 6.0349 55.0564 31.2736
(B6.5XFAD x BXD60)F1-ADtg both 47.2119 8.8695 64.6886 29.7352
(B6.5XFAD x BXD61)F1-ADtg both 13.2537 9.124 31.2317 -4.7244
(B6.5XFAD x BXD61)F1-Ntg both 7.5404 8.0062 23.3161 -8.2353
(B6.5XFAD x BXD62)F1-ADtg both 48.12 13.2219 74.1727 22.0673
(B6.5XFAD x BXD62)F1-Ntg both 40.2414 12.0699 64.0241 16.4586
(B6.5XFAD x BXD65)F1-ADtg both 26.9652 10.6011 47.8539 6.0766
(B6.5XFAD x BXD65)F1-Ntg both 17.0252 10.4528 37.6217 -3.5713
(B6.5XFAD x BXD66)F1-ADtg both 14.9781 9.6559 34.0043 -4.0481
(B6.5XFAD x BXD68)F1-ADtg both 31.0442 9.124 49.0223 13.0661
(B6.5XFAD x BXD68)F1-Ntg both 17.1783 10.2416 37.3587 -3.002
(B6.5XFAD x BXD69)F1-ADtg both 53.9123 8.0062 69.688 38.1366
(B6.5XFAD x BXD69)F1-Ntg both 15.3176 8.5347 32.1346 -1.4993
(B6.5XFAD x BXD70)F1-Ntg both 13.9444 12.0699 37.7272 -9.8383
(B6.5XFAD x BXD75)F1-ADtg both 51.5092 9.3493 69.9312 33.0871
(B6.5XFAD x BXD77)F1-ADtg both 37.9682 9.6559 56.9944 18.942
(B6.5XFAD x BXD77)F1-Ntg both 15.9722 6.8277 29.4257 2.5186
(B6.5XFAD x BXD87)F1-ADtg both 56.3587 7.8222 71.7717 40.9458
(B6.5XFAD x BXD89)F1-Ntg both 41.4242 13.2219 67.4769 15.3715
(B6.5XFAD x D2)F1-ADtg both 28.0738 5.5725 39.0541 17.0936
(B6.5XFAD x D2)F1-Ntg both 20.6644 6.9578 34.3742 6.9545




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA