Project measure / variable:   Shorter7   sperm_VAP_60

ID, description, units MPD:65738   sperm_VAP_60   sperm mean path velocity   [µm/s]  60 min  
Data set, strains Shorter7   CC RIX   28 strains     sex: m     age: 7-44wks
Procedure microscopy
Ontology mappings

  STRAIN COMPARISON PLOT
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Shorter7 - sperm mean path velocity 60 min



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested28 strains
Mean of the strain means123.3   µm/s
Median of the strain means118.2   µm/s
SD of the strain means± 19.51
Coefficient of variation (CV)0.1582
Min–max range of strain means85.03   –   164.3   µm/s
Mean sample size per strain3.9   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 23 34678.4961 1507.7607 4.2806 < 0.0001
Residuals 82 28882.8485 352.2299


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
RIX:CC(001 x 002) m 96.5 9.8995   2   7.0 0.1026 89.5, 103.5 -1.37
RIX:CC(001 x 011) m 112.7 15.084   3 8.7088 0.1338 100.6, 129.6 -0.54
RIX:CC(001 x 018) m 115.4 19.901   7 7.5219 0.1725 98.7, 158.5 -0.4
RIX:CC(002 x 010) m 128.9 11.722   3 6.7678 0.0909 118.9, 141.8 0.29
RIX:CC(002 x 011) m 141.1 18.738   7 7.0822 0.1328 112.4, 159.4 0.91
RIX:CC(003 x 018) m 116.4 21.886   4 10.943 0.1881 99.4, 148.1 -0.35
RIX:CC(008 x 013) m 130.8 26.2   8 9.263 0.2003 88.0, 154.2 0.38
RIX:CC(008 x 021) m 115.1 6.6685   7 2.5205 0.058 102.3, 123.1 -0.42
RIX:CC(008 x 065) m 144.5 7.5319   3 4.3486 0.0521 136.2, 150.9 1.09
RIX:CC(010 x 001) m 115.6 0.0   1   0.0 0.0 115.6, 115.6 -0.39
RIX:CC(010 x 002) m 98.9 0.0   1   0.0 0.0 98.9, 98.9 -1.25
RIX:CC(010 x 011) m 129.5 19.927   7 7.5315 0.1539 102.1, 156.0 0.32
RIX:CC(011 x 003) m 149.4 12.992   5 5.81 0.0869 136.4, 165.5 1.34
RIX:CC(011 x 018) m 114.3 0.0   1   0.0 0.0 114.3, 114.3 -0.46
RIX:CC(013 x 053) m 137.5 0.0   1   0.0 0.0 137.5, 137.5 0.73
RIX:CC(018 x 002) m 109.9 21.036   4 10.518 0.1914 84.0, 134.2 -0.69
RIX:CC(018 x 003) m 136.8 24.011   3 13.863 0.1756 109.4, 154.3 0.69
RIX:CC(018 x 010) m 123.7 25.252   6 10.309 0.2042 100.5, 164.2 0.02
RIX:CC(021 x 065) m 147.9 18.622   4 9.3112 0.1259 124.1, 169.4 1.26
RIX:CC(034 x 008) m 120.0 24.89   2   17.6 0.2074 102.4, 137.6 -0.17
RIX:CC(034 x 021) m 101.0 11.065   4 5.5323 0.1096 92.2, 117.2 -1.14
RIX:CC(034 x 053) m 164.3 11.126   5 4.9758 0.0677 146.0, 174.1 2.1
RIX:CC(053 x 021) m 109.0 15.582   5 6.9687 0.1429 87.5, 130.6 -0.73
RIX:CC(053 x 034) m 85.03 12.994   3 7.5021 0.1528 70.6, 95.8 -1.96
RIX:CC(065 x 008) m 130.3 20.25   4 10.125 0.1554 108.1, 151.0 0.36
RIX:CC(065 x 013) m 105.8 19.395   4 9.6976 0.1833 93.7, 134.7 -0.9
RIX:CC(065 x 034) m 110.8 24.282   4 12.141 0.2192 94.3, 146.7 -0.64
RIX:CC(065 x 053) m 161.0 16.263   2   11.5 0.101 149.5, 172.5 1.93


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
RIX:CC(001 x 002) m 96.5 13.2708 122.8999 70.1001
RIX:CC(001 x 011) m 112.7 10.8356 134.2554 91.1446
RIX:CC(001 x 018) m 115.3857 7.0936 129.4971 101.2744
RIX:CC(002 x 010) m 128.9 10.8356 150.4554 107.3446
RIX:CC(002 x 011) m 141.0571 7.0936 155.1685 126.9458
RIX:CC(003 x 018) m 116.375 9.3839 135.0426 97.7074
RIX:CC(008 x 013) m 130.7875 6.6354 143.9875 117.5875
RIX:CC(008 x 021) m 115.0714 7.0936 129.1828 100.9601
RIX:CC(008 x 065) m 144.5 10.8356 166.0554 122.9446
RIX:CC(010 x 011) m 129.4857 7.0936 143.5971 115.3744
RIX:CC(011 x 003) m 149.42 8.3932 166.1168 132.7232
RIX:CC(018 x 002) m 109.9 9.3839 128.5676 91.2324
RIX:CC(018 x 003) m 136.7667 10.8356 158.3221 115.2112
RIX:CC(018 x 010) m 123.6667 7.6619 138.9087 108.4247
RIX:CC(021 x 065) m 147.925 9.3839 166.5926 129.2574
RIX:CC(034 x 008) m 120.0 13.2708 146.3999 93.6001
RIX:CC(034 x 021) m 101.0 9.3839 119.6676 82.3324
RIX:CC(034 x 053) m 164.34 8.3932 181.0368 147.6432
RIX:CC(053 x 021) m 109.04 8.3932 125.7368 92.3432
RIX:CC(053 x 034) m 85.0333 10.8356 106.5888 63.4779
RIX:CC(065 x 008) m 130.325 9.3839 148.9926 111.6574
RIX:CC(065 x 013) m 105.8 9.3839 124.4676 87.1324
RIX:CC(065 x 034) m 110.75 9.3839 129.4176 92.0824
RIX:CC(065 x 053) m 161.0 13.2708 187.3999 134.6001




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA