Project measure / variable:   Shorter7   sperm_prog_30

ID, description, units MPD:65712   sperm_prog_30   percentage of motile sperm that are 'progressive'   [%]  30 min  
Data set, strains Shorter7   CC RIX   28 strains     sex: m     age: 7-44wks
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  STRAIN COMPARISON PLOT
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Shorter7 - percentage of motile sperm that are 'progressive' 30 min



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested28 strains
Mean of the strain means33.435   %
Median of the strain means32.343   %
SD of the strain means± 10.121
Coefficient of variation (CV)0.3027
Min–max range of strain means10.3   –   54.46   %
Mean sample size per strain3.9   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 23 7867.2043 342.0524 3.9247 < 0.0001
Residuals 81 7059.4357 87.1535


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
RIX:CC(001 x 002) m 24.2 2.687   2   1.9 0.111 22.3, 26.1 -0.91
RIX:CC(001 x 011) m 34.067 10.65   3 6.1488 0.3126 23.4, 44.7 0.06
RIX:CC(001 x 018) m 31.686 8.5883   7 3.2461 0.271 14.9, 42.7 -0.17
RIX:CC(002 x 010) m 27.333 3.3975   3 1.9616 0.1243 24.5, 31.1 -0.6
RIX:CC(002 x 011) m 36.443 5.9593   7 2.2524 0.1635 29.2, 43.4 0.3
RIX:CC(003 x 018) m 33.333 1.2858   3 0.74237 0.0386 32.4, 34.8 -0.01
RIX:CC(008 x 013) m 52.65 8.5489   8 3.0225 0.1624 40.8, 63.7 1.9
RIX:CC(008 x 021) m 31.014 11.387   7 4.304 0.3672 12.7, 46.5 -0.24
RIX:CC(008 x 065) m 37.233 0.65064   3 0.37565 0.0175 36.6, 37.9 0.38
RIX:CC(010 x 001) m 17.5 0.0   1   0.0 0.0 17.5, 17.5 -1.57
RIX:CC(010 x 002) m 23.0 0.0   1   0.0 0.0 23.0, 23.0 -1.03
RIX:CC(010 x 011) m 39.714 9.9396   7 3.7568 0.2503 22.4, 50.5 0.62
RIX:CC(011 x 003) m 38.1 12.993   5 5.8107 0.341 16.4, 50.7 0.46
RIX:CC(011 x 018) m 10.3 0.0   1   0.0 0.0 10.3, 10.3 -2.29
RIX:CC(013 x 053) m 28.8 0.0   1   0.0 0.0 28.8, 28.8 -0.46
RIX:CC(018 x 002) m 25.975 10.406   4 5.2028 0.4006 10.5, 32.9 -0.74
RIX:CC(018 x 003) m 41.933 11.409   3 6.5872 0.2721 28.8, 49.4 0.84
RIX:CC(018 x 010) m 46.867 6.5717   6 2.6829 0.1402 35.8, 54.5 1.33
RIX:CC(021 x 065) m 33.425 14.423   4 7.2113 0.4315 13.1, 44.6 0.0
RIX:CC(034 x 008) m 28.25 11.809   2   8.35 0.418 19.9, 36.6 -0.51
RIX:CC(034 x 021) m 45.2 13.282   4 6.6412 0.2939 29.2, 57.1 1.16
RIX:CC(034 x 053) m 54.46 4.9349   5 2.2069 0.0906 46.1, 58.9 2.08
RIX:CC(053 x 021) m 29.5 9.4787   5 4.239 0.3213 17.2, 37.7 -0.39
RIX:CC(053 x 034) m 29.533 13.506   3 7.7975 0.4573 14.0, 38.5 -0.39
RIX:CC(065 x 008) m 33.0 5.49   4 2.745 0.1664 29.0, 41.0 -0.04
RIX:CC(065 x 013) m 25.3 10.859   4 5.4297 0.4292 9.6, 34.6 -0.8
RIX:CC(065 x 034) m 28.875 8.6631   4 4.3315 0.3 17.3, 37.8 -0.45
RIX:CC(065 x 053) m 48.5 0.28284   2   0.2 0.0058 48.3, 48.7 1.49


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
RIX:CC(001 x 002) m 24.2 6.6013 37.3345 11.0655
RIX:CC(001 x 011) m 34.0667 5.3899 44.7909 23.3424
RIX:CC(001 x 018) m 31.6857 3.5285 38.7064 24.6651
RIX:CC(002 x 010) m 27.3333 5.3899 38.0576 16.6091
RIX:CC(002 x 011) m 36.4429 3.5285 43.4635 29.4222
RIX:CC(003 x 018) m 33.3333 5.3899 44.0576 22.6091
RIX:CC(008 x 013) m 52.65 3.3006 59.2172 46.0828
RIX:CC(008 x 021) m 31.0143 3.5285 38.0349 23.9936
RIX:CC(008 x 065) m 37.2333 5.3899 47.9576 26.5091
RIX:CC(010 x 011) m 39.7143 3.5285 46.7349 32.6936
RIX:CC(011 x 003) m 38.1 4.175 46.407 29.793
RIX:CC(018 x 002) m 25.975 4.6678 35.2625 16.6875
RIX:CC(018 x 003) m 41.9333 5.3899 52.6576 31.2091
RIX:CC(018 x 010) m 46.8667 3.8112 54.4498 39.2835
RIX:CC(021 x 065) m 33.425 4.6678 42.7125 24.1375
RIX:CC(034 x 008) m 28.25 6.6013 41.3845 15.1155
RIX:CC(034 x 021) m 45.2 4.6678 54.4875 35.9125
RIX:CC(034 x 053) m 54.46 4.175 62.767 46.153
RIX:CC(053 x 021) m 29.5 4.175 37.807 21.193
RIX:CC(053 x 034) m 29.5333 5.3899 40.2576 18.8091
RIX:CC(065 x 008) m 33.0 4.6678 42.2875 23.7125
RIX:CC(065 x 013) m 25.3 4.6678 34.5875 16.0125
RIX:CC(065 x 034) m 28.875 4.6678 38.1625 19.5875
RIX:CC(065 x 053) m 48.5 6.6013 61.6345 35.3655




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA