Project measure / variable:   Shorter7   sperm_vigor_60

ID, description, units MPD:65708   sperm_vigor_60   percentage of motile sperm that are 'vigorous'   [%]  60 min  
Data set, strains Shorter7   CC RIX   28 strains     sex: m     age: 7-44wks
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  STRAIN COMPARISON PLOT
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Shorter7 - percentage of motile sperm that are 'vigorous' 60 min



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested28 strains
Mean of the strain means45.393   %
Median of the strain means44.934   %
SD of the strain means± 11.126
Coefficient of variation (CV)0.2451
Min–max range of strain means25.7   –   67.84   %
Mean sample size per strain3.9   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 23 10736.2195 466.7922 4.1082 < 0.0001
Residuals 82 9317.2277 113.6247


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
RIX:CC(001 x 002) m 27.5 10.182   2   7.2 0.3703 20.3, 34.7 -1.61
RIX:CC(001 x 011) m 38.567 7.6422   3 4.4122 0.1982 31.7, 46.8 -0.61
RIX:CC(001 x 018) m 42.914 7.2781   7 2.7509 0.1696 31.0, 54.7 -0.22
RIX:CC(002 x 010) m 44.2 3.747   3 2.1633 0.0848 40.0, 47.2 -0.11
RIX:CC(002 x 011) m 49.657 8.9082   7 3.367 0.1794 35.2, 58.4 0.38
RIX:CC(003 x 018) m 47.975 6.993   4 3.4965 0.1458 39.1, 56.2 0.23
RIX:CC(008 x 013) m 56.59 18.072   8 6.3893 0.3194 25.2, 76.0 1.01
RIX:CC(008 x 021) m 45.871 4.8262   7 1.8241 0.1052 37.6, 52.1 0.04
RIX:CC(008 x 065) m 53.43 6.4609   3 3.7302 0.1209 46.0, 57.7 0.72
RIX:CC(010 x 001) m 40.0 0.0   1   0.0 0.0 40.0, 40.0 -0.48
RIX:CC(010 x 002) m 30.2 0.0   1   0.0 0.0 30.2, 30.2 -1.37
RIX:CC(010 x 011) m 48.257 9.63   7 3.6398 0.1996 37.5, 61.6 0.26
RIX:CC(011 x 003) m 61.86 12.675   5 5.6682 0.2049 50.5, 81.6 1.48
RIX:CC(011 x 018) m 47.6 0.0   1   0.0 0.0 47.6, 47.6 0.2
RIX:CC(013 x 053) m 61.1 0.0   1   0.0 0.0 61.1, 61.1 1.41
RIX:CC(018 x 002) m 36.15 13.107   4 6.5534 0.3626 20.0, 51.5 -0.83
RIX:CC(018 x 003) m 50.83 9.7521   3 5.6304 0.1918 39.8, 58.3 0.49
RIX:CC(018 x 010) m 45.667 12.486   6 5.0975 0.2734 33.2, 67.1 0.02
RIX:CC(021 x 065) m 57.52 12.038   4 6.019 0.2093 41.2, 69.2 1.09
RIX:CC(034 x 008) m 42.95 11.526   2   8.15 0.2684 34.8, 51.1 -0.22
RIX:CC(034 x 021) m 31.675 6.5525   4 3.2763 0.2069 22.7, 37.7 -1.23
RIX:CC(034 x 053) m 67.84 7.4063   5 3.3122 0.1092 55.4, 74.7 2.02
RIX:CC(053 x 021) m 38.14 13.002   5 5.8149 0.3409 26.2, 59.7 -0.65
RIX:CC(053 x 034) m 25.7 14.003   3 8.0848 0.5449 10.0, 36.9 -1.77
RIX:CC(065 x 008) m 43.85 10.299   4 5.1494 0.2349 32.7, 55.3 -0.14
RIX:CC(065 x 013) m 32.85 9.2161   4 4.6081 0.2806 24.6, 45.7 -1.13
RIX:CC(065 x 034) m 38.05 10.916   4 5.4581 0.2869 29.3, 54.0 -0.66
RIX:CC(065 x 053) m 64.05 4.4548   2   3.15 0.0696 60.9, 67.2 1.68


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
RIX:CC(001 x 002) m 27.5 7.5374 42.4943 12.5057
RIX:CC(001 x 011) m 38.5667 6.1543 50.8094 26.3239
RIX:CC(001 x 018) m 42.9143 4.0289 50.9291 34.8995
RIX:CC(002 x 010) m 44.2 6.1543 56.4428 31.9572
RIX:CC(002 x 011) m 49.6571 4.0289 57.6719 41.6424
RIX:CC(003 x 018) m 47.975 5.3297 58.5776 37.3724
RIX:CC(008 x 013) m 56.5875 3.7687 64.0846 49.0904
RIX:CC(008 x 021) m 45.8714 4.0289 53.8862 37.8566
RIX:CC(008 x 065) m 53.4333 6.1543 65.6761 41.1906
RIX:CC(010 x 011) m 48.2571 4.0289 56.2719 40.2424
RIX:CC(011 x 003) m 61.86 4.7671 71.3432 52.3768
RIX:CC(018 x 002) m 36.15 5.3297 46.7526 25.5474
RIX:CC(018 x 003) m 50.8333 6.1543 63.0761 38.5906
RIX:CC(018 x 010) m 45.6667 4.3517 54.3236 37.0097
RIX:CC(021 x 065) m 57.525 5.3297 68.1276 46.9224
RIX:CC(034 x 008) m 42.95 7.5374 57.9443 27.9557
RIX:CC(034 x 021) m 31.675 5.3297 42.2776 21.0724
RIX:CC(034 x 053) m 67.84 4.7671 77.3232 58.3568
RIX:CC(053 x 021) m 38.14 4.7671 47.6232 28.6568
RIX:CC(053 x 034) m 25.7 6.1543 37.9428 13.4572
RIX:CC(065 x 008) m 43.85 5.3297 54.4526 33.2474
RIX:CC(065 x 013) m 32.85 5.3297 43.4526 22.2474
RIX:CC(065 x 034) m 38.05 5.3297 48.6526 27.4474
RIX:CC(065 x 053) m 64.05 7.5374 79.0443 49.0557




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA