Project measure / variable:   Shorter7   sperm_vigor_30

ID, description, units MPD:65707   sperm_vigor_30   percentage of motile sperm that are 'vigorous'   [%]  30 min  
Data set, strains Shorter7   CC RIX   28 strains     sex: m     age: 7-44wks
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  STRAIN COMPARISON PLOT
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Shorter7 - percentage of motile sperm that are 'vigorous' 30 min



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested28 strains
Mean of the strain means53.47   %
Median of the strain means50.85   %
SD of the strain means± 14.921
Coefficient of variation (CV)0.279
Min–max range of strain means28.9   –   78.0   %
Mean sample size per strain3.9   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 23 21034.3659 914.5376 6.4111 < 0.0001
Residuals 81 11554.5393 142.6486


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
RIX:CC(001 x 002) m 35.55 8.2731   2   5.85 0.2327 29.7, 41.4 -1.2
RIX:CC(001 x 011) m 43.033 18.371   3 10.607 0.4269 26.0, 62.5 -0.7
RIX:CC(001 x 018) m 54.99 5.9882   7 2.2633 0.1089 48.3, 63.8 0.1
RIX:CC(002 x 010) m 44.0 19.955   3 11.521 0.4535 31.3, 67.0 -0.63
RIX:CC(002 x 011) m 49.429 10.644   7 4.0231 0.2153 36.9, 65.1 -0.27
RIX:CC(003 x 018) m 66.37 4.6112   3 2.6623 0.0695 62.9, 71.6 0.86
RIX:CC(008 x 013) m 78.0 13.334   8 4.7143 0.171 53.8, 89.7 1.64
RIX:CC(008 x 021) m 52.27 15.509   7 5.862 0.2967 28.0, 64.5 -0.08
RIX:CC(008 x 065) m 48.5 1.562   3 0.90185 0.0322 47.5, 50.3 -0.33
RIX:CC(010 x 001) m 28.9 0.0   1   0.0 0.0 28.9, 28.9 -1.65
RIX:CC(010 x 002) m 40.2 0.0   1   0.0 0.0 40.2, 40.2 -0.89
RIX:CC(010 x 011) m 59.86 7.7268   7 2.9204 0.1291 47.2, 68.4 0.43
RIX:CC(011 x 003) m 74.38 9.3713   5 4.191 0.126 64.7, 89.6 1.4
RIX:CC(011 x 018) m 66.1 0.0   1   0.0 0.0 66.1, 66.1 0.85
RIX:CC(013 x 053) m 62.3 0.0   1   0.0 0.0 62.3, 62.3 0.59
RIX:CC(018 x 002) m 35.3 13.441   4 6.7206 0.3808 15.5, 45.1 -1.22
RIX:CC(018 x 003) m 70.53 8.3152   3 4.8008 0.1179 61.1, 76.8 1.14
RIX:CC(018 x 010) m 67.77 8.841   6 3.6093 0.1305 51.2, 75.9 0.96
RIX:CC(021 x 065) m 67.85 13.906   4 6.9532 0.205 49.1, 82.2 0.96
RIX:CC(034 x 008) m 45.15 1.3435   2   0.95 0.0298 44.2, 46.1 -0.56
RIX:CC(034 x 021) m 60.55 12.932   4 6.4659 0.2136 44.3, 71.5 0.47
RIX:CC(034 x 053) m 76.9 4.646   5 2.0777 0.0604 71.1, 81.9 1.57
RIX:CC(053 x 021) m 44.16 21.619   5 9.6684 0.4896 20.1, 73.7 -0.62
RIX:CC(053 x 034) m 40.333 16.442   3 9.4925 0.4076 21.7, 52.8 -0.88
RIX:CC(065 x 008) m 43.875 9.588   4 4.794 0.2185 36.6, 57.8 -0.64
RIX:CC(065 x 013) m 32.3 13.606   4 6.8031 0.4212 12.3, 42.8 -1.42
RIX:CC(065 x 034) m 35.875 7.9294   4 3.9647 0.221 24.6, 42.2 -1.18
RIX:CC(065 x 053) m 72.8 1.9799   2   1.4 0.0272 71.4, 74.2 1.3


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
RIX:CC(001 x 002) m 35.55 8.4454 52.3536 18.7464
RIX:CC(001 x 011) m 43.0333 6.8956 56.7534 29.3132
RIX:CC(001 x 018) m 54.9857 4.5142 63.9676 46.0038
RIX:CC(002 x 010) m 44.0 6.8956 57.7201 30.2799
RIX:CC(002 x 011) m 49.4286 4.5142 58.4105 40.4466
RIX:CC(003 x 018) m 66.3667 6.8956 80.0868 52.6466
RIX:CC(008 x 013) m 78.0 4.2227 86.4018 69.5982
RIX:CC(008 x 021) m 52.2714 4.5142 61.2534 43.2895
RIX:CC(008 x 065) m 48.5 6.8956 62.2201 34.7799
RIX:CC(010 x 011) m 59.8571 4.5142 68.8391 50.8752
RIX:CC(011 x 003) m 74.38 5.3413 85.0076 63.7524
RIX:CC(018 x 002) m 35.3 5.9718 47.182 23.418
RIX:CC(018 x 003) m 70.5333 6.8956 84.2534 56.8132
RIX:CC(018 x 010) m 67.7667 4.8759 77.4683 58.0651
RIX:CC(021 x 065) m 67.85 5.9718 79.732 55.968
RIX:CC(034 x 008) m 45.15 8.4454 61.9536 28.3464
RIX:CC(034 x 021) m 60.55 5.9718 72.432 48.668
RIX:CC(034 x 053) m 76.9 5.3413 87.5276 66.2724
RIX:CC(053 x 021) m 44.16 5.3413 54.7876 33.5324
RIX:CC(053 x 034) m 40.3333 6.8956 54.0534 26.6132
RIX:CC(065 x 008) m 43.875 5.9718 55.757 31.993
RIX:CC(065 x 013) m 32.3 5.9718 44.182 20.418
RIX:CC(065 x 034) m 35.875 5.9718 47.757 23.993
RIX:CC(065 x 053) m 72.8 8.4454 89.6036 55.9964




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA