Project measure / variable:   Brinkmeyer1   vert_time_t1

ID, description, units MPD:64451   vert_time_t1   time spent vertical, 30 min test, post infection wk 3   [s]  trial 1  
Theiler's murine encephalomyelitis virus study
Data set, strains Brinkmeyer1   CC   4 strains     sex: both     age: 4wks
Procedure open field test
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  STRAIN COMPARISON PLOT
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Brinkmeyer1 - time spent vertical, 30 min test, post infection wk 3 trial 1



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested3 strains3 strains
Mean of the strain means76.83   s 58.17   s
Median of the strain means97.5   s 59.0   s
SD of the strain means± 68.87 ± 31.758
Coefficient of variation (CV)0.8963 0.546
Min–max range of strain means0.0   –   133.0   s 26.0   –   89.5   s
Mean sample size per strain1.7   mice 2.0   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 64.0 64.0 0.0064 0.9437
Residuals 2 20129.0 10064.5


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
CC013/GeniUnc m 59.0 0.0   1   0.0 0.0 59.0, 59.0 0.03
CC016/GeniUnc f 0.0 0.0   2   0.0 None -1.12
CC019/TauUnc f 133.0 0.0   1   0.0 0.0 133.0, 133.0 0.82
CC019/TauUnc m 26.0 44.17   3 25.502 1.6989 -1.01
CC061/GeniUnc f 97.5 82.73   2   58.5 0.8485 39.0, 156.0 0.3
CC061/GeniUnc m 89.5 115.3   2   81.5 1.2878 8.0, 171.0 0.99




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA