Project measure / variable:   Brinkmeyer1   horiz_velocity_t1

ID, description, units MPD:64445   horiz_velocity_t1   horizontal movement velocity, 30 min test, post infection wk 3   [cm/s]  trial 1  
Theiler's murine encephalomyelitis virus study
Data set, strains Brinkmeyer1   CC   4 strains     sex: both     age: 4wks
Procedure open field test
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  STRAIN COMPARISON PLOT
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Brinkmeyer1 - horizontal movement velocity, 30 min test, post infection wk 3 trial 1



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested3 strains3 strains
Mean of the strain means3274.0   cm/s 1215.0   cm/s
Median of the strain means3171.0   cm/s 1066.0   cm/s
SD of the strain means± 847.2 ± 501.0
Coefficient of variation (CV)0.2588 0.4125
Min–max range of strain means2483.0   –   4168.0   cm/s 804.7   –   1773.0   cm/s
Mean sample size per strain1.7   mice 2.0   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 503887.0225 503887.0225 1.1101 0.4026
Residuals 2 907782.445 453891.2225


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
CC013/GeniUnc m 804.7 0.0   1   0.0 0.0 804.7, 804.7 -0.82
CC016/GeniUnc f 4168.0 275.3   2   194.6 0.066 3973.1, 4362.4 1.06
CC019/TauUnc f 3171.0 0.0   1   0.0 0.0 3171.0, 3171.0 -0.12
CC019/TauUnc m 1066.0 368.4   3 212.7 0.3457 805.3, 1487.3 -0.3
CC061/GeniUnc f 2483.0 269.3   2   190.4 0.1084 2292.8, 2673.6 -0.93
CC061/GeniUnc m 1773.0 913.9   2   646.2 0.5154 1127.1, 2419.6 1.11




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA