Project measure / variable:   Brinkmeyer1   horiz_activity_t1

ID, description, units MPD:64439   horiz_activity_t1   number of horizontal movements (beam breaks), 30 min test, post infection wk 3   [n]  trial 1  
Theiler's murine encephalomyelitis virus study
Data set, strains Brinkmeyer1   CC   4 strains     sex: both     age: 4wks
Procedure open field test
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  STRAIN COMPARISON PLOT
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Brinkmeyer1 - number of horizontal movements (beam breaks), 30 min test, post infection wk 3 trial 1

CC019/TauUncCC061/GeniUncCC013/GeniUncCC016/GeniUnc n 140160180200220240260280300femalemale


  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested3 strains3 strains
Mean of the strain means223.7   n 259.1   n
Median of the strain means253.0   n 270.5   n
SD of the strain means± 70.72 ± 38.64
Coefficient of variation (CV)0.3162 0.1492
Min–max range of strain means143.0   –   275.0   n 216.0   –   290.7   n
Mean sample size per strain1.7   mice 2.0   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 306.25 306.25 0.6324 0.5099
Residuals 2 968.5 484.25


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Strain
Sex
Mean
SD
N mice
SEM
CV
Min, Max
Z score
CC013/GeniUnc m 216.0 0.0   1   0.0 0.0 216.0, 216.0 -1.11
CC016/GeniUnc f 143.0 11.314   2   8.0 0.0791 135.0, 151.0 -1.14
CC019/TauUnc f 275.0 0.0   1   0.0 0.0 275.0, 275.0 0.73
CC019/TauUnc m 290.7 11.676   3 6.7412 0.0402 278.0, 301.0 0.82
CC061/GeniUnc f 253.0 11.314   2   8.0 0.0447 245.0, 261.0 0.41
CC061/GeniUnc m 270.5 28.991   2   20.5 0.1072 250.0, 291.0 0.3




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA